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The map label for this gene is 83592167

Identifier: 83592167

GI number: 83592167

Start: 986183

End: 987136

Strand: Direct

Name: 83592167

Synonym: Rru_A0831

Alternate gene names: NA

Gene position: 986183-987136 (Clockwise)

Preceding gene: 83592166

Following gene: 83592168

Centisome position: 22.66

GC content: 61.01

Gene sequence:

>954_bases
ATGAGTGCCCTGACACAGCGTCATGATTTCGTCGTTCTGTTCGATGTCACCAATGGCAATCCCAATGGCGATCCCGATGC
CGGCAATACGCCACGCCTTGATCCCGAGACCAACCACGGTCTGGTGTCGGATGTCTGCCTGAAGCGCAAGATCCGCAACT
ATGTTGAATTGGCCAAGGGCGAGGACAGCGGCTTCCATATCTATGTGCAGGAAGGCGCCATCCTGAATGATCAGCACCGC
AAGGCCTATGTCGCCCTGCGCCCCGACAAGGAAAAAGCCGCCAAGGAGGCCAAGCTCAACCCGCAGAACGATGACGAGGC
CAAGGCCCTGCGCGCCTTCATGTGCGCGAATTTTTTCGATGTGCGGACCTTCGGCGCGGTGATGAGCACCGGGATCAACT
GTGGTCAAGTTCGCGGACCCGTGCAGTTTTCCTTTGCCCGATCGATCGAACCGATCGTGCCCCTGGAGATCTCGATCACC
CGCATGGCGGCGACCAACGAAAAGGAAAAGACCGCCCAGCGGGAAGGGCAGGAGGGCGACGAGCGGACCGAAAACCGCAC
CATGGGCCGCAAGCACATCATCCCCTATGGCTTGTACCGGGCTCATGGTTTCATCTCGGCCAAGCTGGCCGAGCGGACGG
GGTTTGACGAGGGCGATCTGGATCTGCTGCTTGAGGCGGTGGAACAGATGTTCGAACACGACCGCTCGGCGGCGCGCGGC
GAGATGGCTGTGCGCAAGCTGATCGTTTTCCGCCATGCCAATGCCCTGGGTAACGCTCCGGCCCATAGCCTGTTCGATCG
CGTCACCGTGGGGCGGGTGATCGATGGCGAGGTTCGCGCCGTTGACGATCCGGCCATCGATAATCGGCCGCCGGCGCGCA
GTTTCGGCGATTACCGGGTGACTATCGGTCGCGAAGGGCTTCCCGAAGGCGTCGAGATCATCGAGCGCCTTTAG

Upstream 100 bases:

>100_bases
GGCGCGCCGAGGCGATTCAGAGAGCCAAAGAAAAAAAGGCCAAAGAAAAAGCCGCCGCGTCCGCCGCCGAAAACGCCTCC
GCAACCGAGGAAACAGCCCA

Downstream 100 bases:

>100_bases
GCGAAGGGTGTCCGGTGGCTATGGCCGAGGGGGATCAACCCAAGGACGAGGCGGGATGGCAGGGCGAGCCCATTCCGCTT
TCGGCCCTGCAGCATGCGGT

Product: CRISPR-associated Csd2 family protein

Products: NA

Alternate protein names: CRISPR-Associated Csd2 Family Protein; CRISPR-Associated Csh2 Family Protein; Csd2 Family CRISPR-Associated Protein; CRISPR-Associated Protein; Crispr-Associated Protein; Cytoplasmic Protein; Crispr-Protein; CRISPR-Associated RAMP Csd3 Family Protein; CRISPR-Associated RAMP Protein Cmr1 Family; CRISPR-Associated Protein TM; Cas2 Family CRISPR-Associated Protein; CRISPR-Associated Protein Csd3 Family

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MSALTQRHDFVVLFDVTNGNPNGDPDAGNTPRLDPETNHGLVSDVCLKRKIRNYVELAKGEDSGFHIYVQEGAILNDQHR
KAYVALRPDKEKAAKEAKLNPQNDDEAKALRAFMCANFFDVRTFGAVMSTGINCGQVRGPVQFSFARSIEPIVPLEISIT
RMAATNEKEKTAQREGQEGDERTENRTMGRKHIIPYGLYRAHGFISAKLAERTGFDEGDLDLLLEAVEQMFEHDRSAARG
EMAVRKLIVFRHANALGNAPAHSLFDRVTVGRVIDGEVRAVDDPAIDNRPPARSFGDYRVTIGREGLPEGVEIIERL

Sequences:

>Translated_317_residues
MSALTQRHDFVVLFDVTNGNPNGDPDAGNTPRLDPETNHGLVSDVCLKRKIRNYVELAKGEDSGFHIYVQEGAILNDQHR
KAYVALRPDKEKAAKEAKLNPQNDDEAKALRAFMCANFFDVRTFGAVMSTGINCGQVRGPVQFSFARSIEPIVPLEISIT
RMAATNEKEKTAQREGQEGDERTENRTMGRKHIIPYGLYRAHGFISAKLAERTGFDEGDLDLLLEAVEQMFEHDRSAARG
EMAVRKLIVFRHANALGNAPAHSLFDRVTVGRVIDGEVRAVDDPAIDNRPPARSFGDYRVTIGREGLPEGVEIIERL
>Mature_316_residues
SALTQRHDFVVLFDVTNGNPNGDPDAGNTPRLDPETNHGLVSDVCLKRKIRNYVELAKGEDSGFHIYVQEGAILNDQHRK
AYVALRPDKEKAAKEAKLNPQNDDEAKALRAFMCANFFDVRTFGAVMSTGINCGQVRGPVQFSFARSIEPIVPLEISITR
MAATNEKEKTAQREGQEGDERTENRTMGRKHIIPYGLYRAHGFISAKLAERTGFDEGDLDLLLEAVEQMFEHDRSAARGE
MAVRKLIVFRHANALGNAPAHSLFDRVTVGRVIDGEVRAVDDPAIDNRPPARSFGDYRVTIGREGLPEGVEIIERL

Specific function: Unknown

COG id: COG3649

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35255; Mature: 35124

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALTQRHDFVVLFDVTNGNPNGDPDAGNTPRLDPETNHGLVSDVCLKRKIRNYVELAKG
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
EDSGFHIYVQEGAILNDQHRKAYVALRPDKEKAAKEAKLNPQNDDEAKALRAFMCANFFD
CCCCEEEEEECCCEECCCCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
VRTFGAVMSTGINCGQVRGPVQFSFARSIEPIVPLEISITRMAATNEKEKTAQREGQEGD
HHHHHHHHHCCCCCCCCCCCEEEHHHHCCCCCCCEEEEEEEHHHCCCHHHHHHHCCCCCH
ERTENRTMGRKHIIPYGLYRAHGFISAKLAERTGFDEGDLDLLLEAVEQMFEHDRSAARG
HHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EMAVRKLIVFRHANALGNAPAHSLFDRVTVGRVIDGEVRAVDDPAIDNRPPARSFGDYRV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCEEECCCEEECCCCCCCCCCCCCCCCCEEE
TIGREGLPEGVEIIERL
EECCCCCCHHHHHHHCC
>Mature Secondary Structure 
SALTQRHDFVVLFDVTNGNPNGDPDAGNTPRLDPETNHGLVSDVCLKRKIRNYVELAKG
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
EDSGFHIYVQEGAILNDQHRKAYVALRPDKEKAAKEAKLNPQNDDEAKALRAFMCANFFD
CCCCEEEEEECCCEECCCCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
VRTFGAVMSTGINCGQVRGPVQFSFARSIEPIVPLEISITRMAATNEKEKTAQREGQEGD
HHHHHHHHHCCCCCCCCCCCEEEHHHHCCCCCCCEEEEEEEHHHCCCHHHHHHHCCCCCH
ERTENRTMGRKHIIPYGLYRAHGFISAKLAERTGFDEGDLDLLLEAVEQMFEHDRSAARG
HHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EMAVRKLIVFRHANALGNAPAHSLFDRVTVGRVIDGEVRAVDDPAIDNRPPARSFGDYRV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCEEECCCEEECCCCCCCCCCCCCCCCCEEE
TIGREGLPEGVEIIERL
EECCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA