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The map label for this gene is 83592164

Identifier: 83592164

GI number: 83592164

Start: 981431

End: 983689

Strand: Direct

Name: 83592164

Synonym: Rru_A0828

Alternate gene names: NA

Gene position: 981431-983689 (Clockwise)

Preceding gene: 83592163

Following gene: 83592165

Centisome position: 22.55

GC content: 65.65

Gene sequence:

>2259_bases
ATGTACTATGCCCATAGCCTGGAAACCGGAGGTGACAAGACCCGTTGGCAGCCGGCGGCGGATCACGCTTTCGCAACCGG
ACATCTGGCTGCGGGCTTCGCCCAGTCGTTTGGGGCGGAAAAGGCCGCCCGGCTGGCCGGCCTGCTTCATGATCTTGGGA
AATACTGTCGCGCCTTTCAGGCCCGGCTTGAGGGCGCGCCGGAGCGGGTTGATCACGCGACGGCCGGGGCTATTACGGTG
CGGGCCCTGCTGGCGGGAAGTTCCGATCGATGGGATCGGACCCTGGGGGAGATCCTCTCCTATGTCATCGCCGGCCATCA
CGGTGGCTTGCCCGACTGGCAGGGGCTGGCCGATCGTCTGAAGGCAGATCTATCCGGGCTTGACCCGGTCTGGCGCGACG
AAATCGCTGTCGCCCCCCAGGGGCTCGCGCCGTCTTTAACGCCCCATCCCTCTAAAGAGCGCTTGCCCTTTCAACTGGCC
TTTCTCGGGCGAATGATCTTTTCCTGTCTGGTCGATGCCGATTTCAAAGACACCGAGGCCTTTTATGAGAGGGAGGCAGG
AACGCGGAGTGATCGGCTGTGGCCGCTTTTGCCGGCGATCATCGATCGGCTGATCGCCCGCTTCAACGACCATATGGCGA
CAAAGGCCCCGCTGGCGGGAGAGCCCGTCTCGGCGGTCACTCTTCTGCGTCAGGATGTCCTGGCCCAGGCGCGGGCCCGG
GCGGCGATGAGCGAAGGGTTGTTTACCCTGACCGTGCCCACGGGCGGCGGTAAGACCCTGGCCTCGCTTGGCTTCGCCCT
CGATCACGCCAAGCGCCATGGGTTGGAGCGGATCATCTTCGCCATTCCCTTTACCTCGATCCTTGACCAGACGGCGGCGG
TCTTTCGCGATGTCTTGGGCGAGGGGGTGATCCTTGAACACCACAGCGCCATCGAGGCCGAGGAGAAGGCGCGCCGCGAG
CCACCCCAGCAGCGCGATAAACTGCGTCTGGCGATGGAGGATTGGGCCGCGCCCCTCATTCTCACCACCACTGTCCAGCT
TTTCGAAAGCCTGTTCGCCAATCGCCCGGCCCGCTGTCGCAAGCTGCATTCCATCGCGCGCAGCGTCATCGTTCTCGACG
AGGCGCAAACCCTGCCGCTGCCCCTGCTCAAGCCCTGCGTCGCCGCTATCGATGAACTGACGCGCAACTACAAGGCCTCG
GTCGTGCTGTGTACGGCCACCCAGCCGGCGCTTGATCGCCGCCGCTTCGCCGCCGGCGATGACATGGGGCTTGATTTGGC
GGGCCGCGAACTCGCCCCCGATCCCGGCGCCCTGGCCGCCCGGCTGGTTCGCGTCACCCTGCGTCAAGCCGGGGTGCTGA
GCGATGAGGACGTGGTAACCGACCTTGCCGATCCTCCCCAAGCCCTAGTCATCGTCAATACGCGCAAGCATGCCCTGGCG
CTTTATCGGCGGGCGGTCGAGGCCGGCCTGGAGGGGGTGGTTCACCTGAGCACCCGCCACTATGGCGCCCACCGCCGCGC
CATTTTGGACGATGTTCGCCAGCGCCTGGACCGGGGCTTGCCCTGCCGGCTGATCGCCACCTCCTTGGTGGAAGCCGGGG
TCGATGTGGATTTCCCACGGGTCTGGCGGGCCGAGGGCGGGCTTGATCAAATCGCCCAGGCGGCGGGGCGGTGCAATCGC
GAGGGCCGGCGGCCGGTTGAAGACAGCATCGTCACGGTCTTTCGGGCCGCTGACCATAAGCCGCCCGCCGCCGTCGCCCA
ACTGGCGGCGGCCTATGGTCGCATCGCCCAGAACCACGCCAATCCCTTCAGCCCAGCCGCCCTTGAGGACTATTTCCGCG
AGGTCTATTGGAGCAAGGGCCCGGGGCTGGATGAACACAAGATCCTCAAGGCCTTCGCTTGGGATCGCTCTGGCGGCACC
CTCAACTACAAACGGGTGGCCGAGGATTTTCGGATGATCGACAGCGGCATGGCGCCGGTGATCATCGGGCGCGACGCCCA
GGCCCGTGCGGCCCTTGCCCTGTTGGGGCGGCCGGACGCGCGGGCCGGTCAGGTGGCGCGGCTTCTTCAGCCCTATCTGG
TTCAGGTTCCGCCCCCCGCCCGCATGGCGCTAATCACCAACGGCCATGTGCGTTTCGCCGAAGAGCGGAGCTTTGGCGAT
CAATTCGCCGTGCTGACCGCCGACAGCCTGTATCGCGACGACACCGGCTTGCTGTGGGAAGACGCCGGGTATCTGGATCT
GGAGCAGTCCATCTTCTAA

Upstream 100 bases:

>100_bases
TTTTCTATTGATGGGGGTAAACGGGGAGGGTACTTTGATTGTTAAAGTAAAAAGAAAACTACCAATGGTTTTCTAGTCGT
GTAAACGGTGTTTTCGTCGA

Downstream 100 bases:

>100_bases
AAGGATTCCTCATGTCGCATGGCATCAAGCTGCTGGTTTCGGGTGATCACGCCTGTTTCACCCGGCCGGAAATGAAGGCC
GAGCGGGTTTCCTATGATGT

Product: CRISPR-associated helicase Cas3 family protein

Products: NA

Alternate protein names: Helicase; CRISPR-Associated Helicase Cas3 Family Protein Protein; CRISPR-Associated Helicase Cas3 Domain Protein; CRISPR-Associated HD Domain Protein; CRISPR-Associated Helicase Cas3 Domain-Containing Protein; ATP-Dependent RNA Helicase; CRISPR-Associated Helicase; DEAD/DEAH Box Helicase Domain-Containing Protein; Crispr-Associated Helicase Cas3 Domain Protein; Crispr-Associated Hd Domain Protein; Helicases; CRISPR-Associated Helicase Cas3 Core; CRISPR-Associated Helicase Cas3 Family; Helicase-Like Protein; Cas3 Family CRISPR-Associated Helicase; Helicases-Like Protein; CRISPR-Associated Helicase Cas3 Protein; CRISPR-Associated HD Domain-Containing Protein; ATP-Dependent RNA Helicase SrmB

Number of amino acids: Translated: 752; Mature: 752

Protein sequence:

>752_residues
MYYAHSLETGGDKTRWQPAADHAFATGHLAAGFAQSFGAEKAARLAGLLHDLGKYCRAFQARLEGAPERVDHATAGAITV
RALLAGSSDRWDRTLGEILSYVIAGHHGGLPDWQGLADRLKADLSGLDPVWRDEIAVAPQGLAPSLTPHPSKERLPFQLA
FLGRMIFSCLVDADFKDTEAFYEREAGTRSDRLWPLLPAIIDRLIARFNDHMATKAPLAGEPVSAVTLLRQDVLAQARAR
AAMSEGLFTLTVPTGGGKTLASLGFALDHAKRHGLERIIFAIPFTSILDQTAAVFRDVLGEGVILEHHSAIEAEEKARRE
PPQQRDKLRLAMEDWAAPLILTTTVQLFESLFANRPARCRKLHSIARSVIVLDEAQTLPLPLLKPCVAAIDELTRNYKAS
VVLCTATQPALDRRRFAAGDDMGLDLAGRELAPDPGALAARLVRVTLRQAGVLSDEDVVTDLADPPQALVIVNTRKHALA
LYRRAVEAGLEGVVHLSTRHYGAHRRAILDDVRQRLDRGLPCRLIATSLVEAGVDVDFPRVWRAEGGLDQIAQAAGRCNR
EGRRPVEDSIVTVFRAADHKPPAAVAQLAAAYGRIAQNHANPFSPAALEDYFREVYWSKGPGLDEHKILKAFAWDRSGGT
LNYKRVAEDFRMIDSGMAPVIIGRDAQARAALALLGRPDARAGQVARLLQPYLVQVPPPARMALITNGHVRFAEERSFGD
QFAVLTADSLYRDDTGLLWEDAGYLDLEQSIF

Sequences:

>Translated_752_residues
MYYAHSLETGGDKTRWQPAADHAFATGHLAAGFAQSFGAEKAARLAGLLHDLGKYCRAFQARLEGAPERVDHATAGAITV
RALLAGSSDRWDRTLGEILSYVIAGHHGGLPDWQGLADRLKADLSGLDPVWRDEIAVAPQGLAPSLTPHPSKERLPFQLA
FLGRMIFSCLVDADFKDTEAFYEREAGTRSDRLWPLLPAIIDRLIARFNDHMATKAPLAGEPVSAVTLLRQDVLAQARAR
AAMSEGLFTLTVPTGGGKTLASLGFALDHAKRHGLERIIFAIPFTSILDQTAAVFRDVLGEGVILEHHSAIEAEEKARRE
PPQQRDKLRLAMEDWAAPLILTTTVQLFESLFANRPARCRKLHSIARSVIVLDEAQTLPLPLLKPCVAAIDELTRNYKAS
VVLCTATQPALDRRRFAAGDDMGLDLAGRELAPDPGALAARLVRVTLRQAGVLSDEDVVTDLADPPQALVIVNTRKHALA
LYRRAVEAGLEGVVHLSTRHYGAHRRAILDDVRQRLDRGLPCRLIATSLVEAGVDVDFPRVWRAEGGLDQIAQAAGRCNR
EGRRPVEDSIVTVFRAADHKPPAAVAQLAAAYGRIAQNHANPFSPAALEDYFREVYWSKGPGLDEHKILKAFAWDRSGGT
LNYKRVAEDFRMIDSGMAPVIIGRDAQARAALALLGRPDARAGQVARLLQPYLVQVPPPARMALITNGHVRFAEERSFGD
QFAVLTADSLYRDDTGLLWEDAGYLDLEQSIF
>Mature_752_residues
MYYAHSLETGGDKTRWQPAADHAFATGHLAAGFAQSFGAEKAARLAGLLHDLGKYCRAFQARLEGAPERVDHATAGAITV
RALLAGSSDRWDRTLGEILSYVIAGHHGGLPDWQGLADRLKADLSGLDPVWRDEIAVAPQGLAPSLTPHPSKERLPFQLA
FLGRMIFSCLVDADFKDTEAFYEREAGTRSDRLWPLLPAIIDRLIARFNDHMATKAPLAGEPVSAVTLLRQDVLAQARAR
AAMSEGLFTLTVPTGGGKTLASLGFALDHAKRHGLERIIFAIPFTSILDQTAAVFRDVLGEGVILEHHSAIEAEEKARRE
PPQQRDKLRLAMEDWAAPLILTTTVQLFESLFANRPARCRKLHSIARSVIVLDEAQTLPLPLLKPCVAAIDELTRNYKAS
VVLCTATQPALDRRRFAAGDDMGLDLAGRELAPDPGALAARLVRVTLRQAGVLSDEDVVTDLADPPQALVIVNTRKHALA
LYRRAVEAGLEGVVHLSTRHYGAHRRAILDDVRQRLDRGLPCRLIATSLVEAGVDVDFPRVWRAEGGLDQIAQAAGRCNR
EGRRPVEDSIVTVFRAADHKPPAAVAQLAAAYGRIAQNHANPFSPAALEDYFREVYWSKGPGLDEHKILKAFAWDRSGGT
LNYKRVAEDFRMIDSGMAPVIIGRDAQARAALALLGRPDARAGQVARLLQPYLVQVPPPARMALITNGHVRFAEERSFGD
QFAVLTADSLYRDDTGLLWEDAGYLDLEQSIF

Specific function: Unknown

COG id: COG1203

COG function: function code R; Predicted helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82243; Mature: 82243

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYAHSLETGGDKTRWQPAADHAFATGHLAAGFAQSFGAEKAARLAGLLHDLGKYCRAFQ
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
ARLEGAPERVDHATAGAITVRALLAGSSDRWDRTLGEILSYVIAGHHGGLPDWQGLADRL
HHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
KADLSGLDPVWRDEIAVAPQGLAPSLTPHPSKERLPFQLAFLGRMIFSCLVDADFKDTEA
HHHHCCCCCHHHCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH
FYEREAGTRSDRLWPLLPAIIDRLIARFNDHMATKAPLAGEPVSAVTLLRQDVLAQARAR
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AAMSEGLFTLTVPTGGGKTLASLGFALDHAKRHGLERIIFAIPFTSILDQTAAVFRDVLG
HHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHC
EGVILEHHSAIEAEEKARREPPQQRDKLRLAMEDWAAPLILTTTVQLFESLFANRPARCR
CCEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
KLHSIARSVIVLDEAQTLPLPLLKPCVAAIDELTRNYKASVVLCTATQPALDRRRFAAGD
HHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCC
DMGLDLAGRELAPDPGALAARLVRVTLRQAGVLSDEDVVTDLADPPQALVIVNTRKHALA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEECCHHHHHH
LYRRAVEAGLEGVVHLSTRHYGAHRRAILDDVRQRLDRGLPCRLIATSLVEAGVDVDFPR
HHHHHHHHHHCCEEEEHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCH
VWRAEGGLDQIAQAAGRCNREGRRPVEDSIVTVFRAADHKPPAAVAQLAAAYGRIAQNHA
HHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
NPFSPAALEDYFREVYWSKGPGLDEHKILKAFAWDRSGGTLNYKRVAEDFRMIDSGMAPV
CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCE
IIGRDAQARAALALLGRPDARAGQVARLLQPYLVQVPPPARMALITNGHVRFAEERSFGD
EECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCCCEEEEECCCEEEEHHHCCCC
QFAVLTADSLYRDDTGLLWEDAGYLDLEQSIF
CEEEEEHHHHHCCCCCCEECCCCCCCHHHHCC
>Mature Secondary Structure
MYYAHSLETGGDKTRWQPAADHAFATGHLAAGFAQSFGAEKAARLAGLLHDLGKYCRAFQ
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
ARLEGAPERVDHATAGAITVRALLAGSSDRWDRTLGEILSYVIAGHHGGLPDWQGLADRL
HHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
KADLSGLDPVWRDEIAVAPQGLAPSLTPHPSKERLPFQLAFLGRMIFSCLVDADFKDTEA
HHHHCCCCCHHHCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH
FYEREAGTRSDRLWPLLPAIIDRLIARFNDHMATKAPLAGEPVSAVTLLRQDVLAQARAR
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AAMSEGLFTLTVPTGGGKTLASLGFALDHAKRHGLERIIFAIPFTSILDQTAAVFRDVLG
HHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHC
EGVILEHHSAIEAEEKARREPPQQRDKLRLAMEDWAAPLILTTTVQLFESLFANRPARCR
CCEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
KLHSIARSVIVLDEAQTLPLPLLKPCVAAIDELTRNYKASVVLCTATQPALDRRRFAAGD
HHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCC
DMGLDLAGRELAPDPGALAARLVRVTLRQAGVLSDEDVVTDLADPPQALVIVNTRKHALA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEECCHHHHHH
LYRRAVEAGLEGVVHLSTRHYGAHRRAILDDVRQRLDRGLPCRLIATSLVEAGVDVDFPR
HHHHHHHHHHCCEEEEHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCH
VWRAEGGLDQIAQAAGRCNREGRRPVEDSIVTVFRAADHKPPAAVAQLAAAYGRIAQNHA
HHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
NPFSPAALEDYFREVYWSKGPGLDEHKILKAFAWDRSGGTLNYKRVAEDFRMIDSGMAPV
CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCE
IIGRDAQARAALALLGRPDARAGQVARLLQPYLVQVPPPARMALITNGHVRFAEERSFGD
EECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCCCEEEEECCCEEEEHHHCCCC
QFAVLTADSLYRDDTGLLWEDAGYLDLEQSIF
CEEEEEHHHHHCCCCCCEECCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA