Click here to switch to the map view.

The map label for this gene is yafV [C]

Identifier: 83592078

GI number: 83592078

Start: 864378

End: 865217

Strand: Direct

Name: yafV [C]

Synonym: Rru_A0739

Alternate gene names: 83592078

Gene position: 864378-865217 (Clockwise)

Preceding gene: 83592077

Following gene: 83592079

Centisome position: 19.86

GC content: 64.64

Gene sequence:

>840_bases
ATGACCCAGCCCCCCCGTTCCTTCACCGCCGCTTGCATTCAGGTCAATGCCGGGCGCGAGGTCTATCCCAATGTGGAGGC
GGCGAGCGCCCTGGTGCGCGAGGCGCGCGAGCGTGGGGCGGACATGGTGTTCATGCCCGAAAACGTGGCGATGATGGAAT
GGGGGCGGCGTAATATCCAGGCCAAGGCGATGCCCGAGGAGGATCACGTCGCCTTGACCGCCTTCCGCGATCTCGCCCGC
GATCTGCATATCTGGCTGCATTGCGGCACGCTGGCCGTCGCCGTCGGCGATGGCATGGTGGCCAACCGCACCTATGTGGT
CGATAGCGATGGGGCGATCCGCGGCCGCTACGACAAGATCCACATGTTCGACGTTAATCTGGCCGATGGCGAAAGCTATA
AGGAAAGCTCGACCTTTCAGGCGGGATCGCGGGCGGTGGCCCTGGATATCCCCTTTGGCCGGCTCGGGTTGTCGATCTGT
TACGATCTGCGCTTTCCCCATCTGTTTCGCGCCCTGGCCAAGGCCGGCTGTCATTATCTGACCATCCCGGCGGCCTTCAC
CCGCACCACCGGCGAGGCCCATTGGCATGTGCTGCAGCGGACGCGGGCGATCGAGACCGGCTGTTACGTGATTTCCCCGG
CCCAGACCGGCACCCATGCCGAAGGCCGCCAAACCTATGGCCATGCCCTGATCATCGATCCCTGGGGACGGGTTCTGGCC
GATGCCGGCGAGGCCCCGGGCATCATCCTGGCCAAGATCGATCCCGAAAAGGTGGTCGAGGCGCGGGCGATGGTTCCGTC
GCTCTCCCACGACCGGGTCTTCGCCCTCGATACGCTTTAG

Upstream 100 bases:

>100_bases
CGCAGATCTTCATCGACGGCCGGGCCTTGGGCGGCTGCGATGACATCCACGCCCTTGACCGCCTGGGCAAGCTTGATGGT
CTTCTGTCGGGAAGCGCGCC

Downstream 100 bases:

>100_bases
GGCCCGCCTTGCCTTCGTCCACCGGCTGGGGTAGAGGGGGGGCTTGTTCGGAACGGTAAAAATGATCCGCTATACCCTGA
TCTGTGACAACGACCACGAG

Product: bifunctional nitrilase/cyanide hydratase/apolipoprotein N-acyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTQPPRSFTAACIQVNAGREVYPNVEAASALVREARERGADMVFMPENVAMMEWGRRNIQAKAMPEEDHVALTAFRDLAR
DLHIWLHCGTLAVAVGDGMVANRTYVVDSDGAIRGRYDKIHMFDVNLADGESYKESSTFQAGSRAVALDIPFGRLGLSIC
YDLRFPHLFRALAKAGCHYLTIPAAFTRTTGEAHWHVLQRTRAIETGCYVISPAQTGTHAEGRQTYGHALIIDPWGRVLA
DAGEAPGIILAKIDPEKVVEARAMVPSLSHDRVFALDTL

Sequences:

>Translated_279_residues
MTQPPRSFTAACIQVNAGREVYPNVEAASALVREARERGADMVFMPENVAMMEWGRRNIQAKAMPEEDHVALTAFRDLAR
DLHIWLHCGTLAVAVGDGMVANRTYVVDSDGAIRGRYDKIHMFDVNLADGESYKESSTFQAGSRAVALDIPFGRLGLSIC
YDLRFPHLFRALAKAGCHYLTIPAAFTRTTGEAHWHVLQRTRAIETGCYVISPAQTGTHAEGRQTYGHALIIDPWGRVLA
DAGEAPGIILAKIDPEKVVEARAMVPSLSHDRVFALDTL
>Mature_278_residues
TQPPRSFTAACIQVNAGREVYPNVEAASALVREARERGADMVFMPENVAMMEWGRRNIQAKAMPEEDHVALTAFRDLARD
LHIWLHCGTLAVAVGDGMVANRTYVVDSDGAIRGRYDKIHMFDVNLADGESYKESSTFQAGSRAVALDIPFGRLGLSICY
DLRFPHLFRALAKAGCHYLTIPAAFTRTTGEAHWHVLQRTRAIETGCYVISPAQTGTHAEGRQTYGHALIIDPWGRVLAD
AGEAPGIILAKIDPEKVVEARAMVPSLSHDRVFALDTL

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI297632350, Length=274, Percent_Identity=36.8613138686131, Blast_Score=176, Evalue=2e-44,
Organism=Homo sapiens, GI297632348, Length=274, Percent_Identity=36.8613138686131, Blast_Score=176, Evalue=2e-44,
Organism=Homo sapiens, GI5031947, Length=274, Percent_Identity=36.8613138686131, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI9910460, Length=268, Percent_Identity=33.5820895522388, Blast_Score=162, Evalue=2e-40,
Organism=Homo sapiens, GI297632346, Length=198, Percent_Identity=32.3232323232323, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17556280, Length=270, Percent_Identity=39.2592592592593, Blast_Score=194, Evalue=6e-50,
Organism=Saccharomyces cerevisiae, GI6322335, Length=295, Percent_Identity=31.864406779661, Blast_Score=160, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6323383, Length=261, Percent_Identity=32.9501915708812, Blast_Score=155, Evalue=9e-39,
Organism=Drosophila melanogaster, GI17933642, Length=278, Percent_Identity=35.2517985611511, Blast_Score=154, Evalue=6e-38,
Organism=Drosophila melanogaster, GI21355835, Length=274, Percent_Identity=26.6423357664234, Blast_Score=137, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 30674; Mature: 30543

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS50263 CN_HYDROLASE ; PS01227 UPF0012

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPPRSFTAACIQVNAGREVYPNVEAASALVREARERGADMVFMPENVAMMEWGRRNIQ
CCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCE
AKAMPEEDHVALTAFRDLARDLHIWLHCGTLAVAVGDGMVANRTYVVDSDGAIRGRYDKI
EECCCCCCCCHHHHHHHHHHHEEEEEEECEEEEEECCCEEECEEEEECCCCCEECCCCEE
HMFDVNLADGESYKESSTFQAGSRAVALDIPFGRLGLSICYDLRFPHLFRALAKAGCHYL
EEEEEEECCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHEEECCCHHHHHHHHHCCCEEE
TIPAAFTRTTGEAHWHVLQRTRAIETGCYVISPAQTGTHAEGRQTYGHALIIDPWGRVLA
EECCCEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEECCHHHHHH
DAGEAPGIILAKIDPEKVVEARAMVPSLSHDRVFALDTL
CCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCEEEEECC
>Mature Secondary Structure 
TQPPRSFTAACIQVNAGREVYPNVEAASALVREARERGADMVFMPENVAMMEWGRRNIQ
CCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCE
AKAMPEEDHVALTAFRDLARDLHIWLHCGTLAVAVGDGMVANRTYVVDSDGAIRGRYDKI
EECCCCCCCCHHHHHHHHHHHEEEEEEECEEEEEECCCEEECEEEEECCCCCEECCCCEE
HMFDVNLADGESYKESSTFQAGSRAVALDIPFGRLGLSICYDLRFPHLFRALAKAGCHYL
EEEEEEECCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHEEECCCHHHHHHHHHCCCEEE
TIPAAFTRTTGEAHWHVLQRTRAIETGCYVISPAQTGTHAEGRQTYGHALIIDPWGRVLA
EECCCEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEECCHHHHHH
DAGEAPGIILAKIDPEKVVEARAMVPSLSHDRVFALDTL
CCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]