Click here to switch to the map view.

The map label for this gene is bioC [C]

Identifier: 83592075

GI number: 83592075

Start: 862293

End: 863219

Strand: Reverse

Name: bioC [C]

Synonym: Rru_A0736

Alternate gene names: 83592075

Gene position: 863219-862293 (Counterclockwise)

Preceding gene: 83592080

Following gene: 83592074

Centisome position: 19.83

GC content: 70.66

Gene sequence:

>927_bases
ATGTCCGAGAGCATGACCGTCTTCGATCGCCGCGCGGTTCGCCGCCACCGCGACCGCGCCGCCCCCACCCTTGACGGGTT
CGATTTCCTGCTGGCCGAAGCCGCCGAGCGGCTGACCGAGCGGCTGGACGATATCACCCGGCGTTTCCCTTTGGCCCTTG
ACCTCGGCTGCCATGGCGGCGAGGTCGGCCGGGCCTTGGGGAAGCGCGGCGGGGTCGACACCCTGCTCGCCTGCGATCTG
TCGCCGGCCTTCGCCGCCCGCGCCGCCGGCGATAAGGCCGCCCGCGCCTCCGGCGACAAGGTCACCCTAGCCTTCGCCGC
CGACGAGGAACTTCTGCCGATCCGCCCGCAAAGCCTGGATCTGGTGCTGTCGAACCTGTCGCTGCATTGGGTGAACGACC
TGCCCGGCGCCCTGATCCAGATCCGCCGGGCCCTCAAACCCGATGGCCTGTTCCTGGGCTGCCTGTTGGGCGGCGAGACC
TTGGGCGAATTGCGCGGCTGTCTGGCGCAGACGGAAATCGCCCTGGAAGGCGGCTTGTCGCCGCGCACCAGCCCGCTGGC
CGATGTCCGCGACGCCGGCAACCTGCTGACCCGCGCCGGCTTCGCCCTGCCCACCGTCGATGTCGATACCCTGACCGTCC
ATTACGGCGATCCGCTGGCGCTGTTGCGCGACCTGCGCGGCATGGGCGAGACCAACGCGGTGATCGAGCGGCGCAAGGGC
TTCACCCGCCGCGAGACCCTGCTTTCGGCGCTCGCCCTCTACCGCGAACGCCATGGCGACGACCAGGGGCGGGTGCCCGC
CACCTTCCAGATCATCACCCTGACCGCCTGGGCCCCCTCGCCCGATCAGCCCCAGCCGGCCAAGCGCGGCTCGGGCATGG
TTGGCCTGGGACAGGCCTTGGCCAATCCGGGCGCCCCCCTTGTTTAA

Upstream 100 bases:

>100_bases
CCCCCGGCCCATCTCCCGCCACGACGCCCCCATCGCCCCCTCCGCTTTATCCGCGGCTTCCCCCTGGAGACCGACGGGCG
AACCGACTATATCAGGCTCC

Downstream 100 bases:

>100_bases
CCCTTTGGTGTAAGGACGCCGCCATGCTGTTTCCCACGCCGCTGGTCGAAGGCCGGCTGGTCAAGCGCTACATGCGGTTC
CTGGCCGATGTGATCTTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MSESMTVFDRRAVRRHRDRAAPTLDGFDFLLAEAAERLTERLDDITRRFPLALDLGCHGGEVGRALGKRGGVDTLLACDL
SPAFAARAAGDKAARASGDKVTLAFAADEELLPIRPQSLDLVLSNLSLHWVNDLPGALIQIRRALKPDGLFLGCLLGGET
LGELRGCLAQTEIALEGGLSPRTSPLADVRDAGNLLTRAGFALPTVDVDTLTVHYGDPLALLRDLRGMGETNAVIERRKG
FTRRETLLSALALYRERHGDDQGRVPATFQIITLTAWAPSPDQPQPAKRGSGMVGLGQALANPGAPLV

Sequences:

>Translated_308_residues
MSESMTVFDRRAVRRHRDRAAPTLDGFDFLLAEAAERLTERLDDITRRFPLALDLGCHGGEVGRALGKRGGVDTLLACDL
SPAFAARAAGDKAARASGDKVTLAFAADEELLPIRPQSLDLVLSNLSLHWVNDLPGALIQIRRALKPDGLFLGCLLGGET
LGELRGCLAQTEIALEGGLSPRTSPLADVRDAGNLLTRAGFALPTVDVDTLTVHYGDPLALLRDLRGMGETNAVIERRKG
FTRRETLLSALALYRERHGDDQGRVPATFQIITLTAWAPSPDQPQPAKRGSGMVGLGQALANPGAPLV
>Mature_307_residues
SESMTVFDRRAVRRHRDRAAPTLDGFDFLLAEAAERLTERLDDITRRFPLALDLGCHGGEVGRALGKRGGVDTLLACDLS
PAFAARAAGDKAARASGDKVTLAFAADEELLPIRPQSLDLVLSNLSLHWVNDLPGALIQIRRALKPDGLFLGCLLGGETL
GELRGCLAQTEIALEGGLSPRTSPLADVRDAGNLLTRAGFALPTVDVDTLTVHYGDPLALLRDLRGMGETNAVIERRKGF
TRRETLLSALALYRERHGDDQGRVPATFQIITLTAWAPSPDQPQPAKRGSGMVGLGQALANPGAPLV

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI40018642, Length=298, Percent_Identity=43.2885906040268, Blast_Score=239, Evalue=3e-63,
Organism=Homo sapiens, GI86792933, Length=297, Percent_Identity=40.0673400673401, Blast_Score=201, Evalue=5e-52,
Organism=Escherichia coli, GI1786994, Length=226, Percent_Identity=26.5486725663717, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17535003, Length=303, Percent_Identity=35.3135313531353, Blast_Score=177, Evalue=5e-45,
Organism=Drosophila melanogaster, GI19922210, Length=296, Percent_Identity=42.2297297297297, Blast_Score=234, Evalue=8e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 32966; Mature: 32835

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESMTVFDRRAVRRHRDRAAPTLDGFDFLLAEAAERLTERLDDITRRFPLALDLGCHGG
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCH
EVGRALGKRGGVDTLLACDLSPAFAARAAGDKAARASGDKVTLAFAADEELLPIRPQSLD
HHHHHHHCCCCCCEEEEECCCHHHHHHHCCCHHHHCCCCEEEEEEECCCCCCCCCCCHHH
LVLSNLSLHWVNDLPGALIQIRRALKPDGLFLGCLLGGETLGELRGCLAQTEIALEGGLS
HHHHCCCEEEHHCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCC
PRTSPLADVRDAGNLLTRAGFALPTVDVDTLTVHYGDPLALLRDLRGMGETNAVIERRKG
CCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHCC
FTRRETLLSALALYRERHGDDQGRVPATFQIITLTAWAPSPDQPQPAKRGSGMVGLGQAL
CHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCHHHCCCCEEHHHHH
ANPGAPLV
CCCCCCCC
>Mature Secondary Structure 
SESMTVFDRRAVRRHRDRAAPTLDGFDFLLAEAAERLTERLDDITRRFPLALDLGCHGG
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCH
EVGRALGKRGGVDTLLACDLSPAFAARAAGDKAARASGDKVTLAFAADEELLPIRPQSLD
HHHHHHHCCCCCCEEEEECCCHHHHHHHCCCHHHHCCCCEEEEEEECCCCCCCCCCCHHH
LVLSNLSLHWVNDLPGALIQIRRALKPDGLFLGCLLGGETLGELRGCLAQTEIALEGGLS
HHHHCCCEEEHHCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCC
PRTSPLADVRDAGNLLTRAGFALPTVDVDTLTVHYGDPLALLRDLRGMGETNAVIERRKG
CCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHCC
FTRRETLLSALALYRERHGDDQGRVPATFQIITLTAWAPSPDQPQPAKRGSGMVGLGQAL
CHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCHHHCCCCEEHHHHH
ANPGAPLV
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]