| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is sfsA
Identifier: 83592074
GI number: 83592074
Start: 861532
End: 862269
Strand: Reverse
Name: sfsA
Synonym: Rru_A0735
Alternate gene names: 83592074
Gene position: 862269-861532 (Counterclockwise)
Preceding gene: 83592075
Following gene: 83592073
Centisome position: 19.81
GC content: 66.94
Gene sequence:
>738_bases ATGCTGTTTCCCACGCCGCTGGTCGAAGGCCGGCTGGTCAAGCGCTACATGCGGTTCCTGGCCGATGTGATCTTGGACGA TGGCACCGCCGTGACCGCCCATTGCGCCAATTCGGGATCGATGGCCTCGGTCAAGGAGCCGGGATCGCCGGTCTGGCTTT CCGAAAGCCCCAATCCCGACCGCAAGCTGAAATACACCTGGGAGATCATCCGCGTTGGCGACGCCTATTCCGGCGTCAAC ACCGGCACGCCCAATGCCGTGGTCGCCGAGGCCATCGCCGAGGGCAAGATCCCGCCGCTTGCCGGCTATGCCCGCCTGCG CCGCGAGGTCAAATACGGCAAGACCTCGCGCATCGACATCCTGCTCGAGGATGATGCCGCCGCCGACGACGCCCCCGCCC GCCCGCGCTGCTATGTCGAGGTCAAGAACGTCACCCTCAAGCGCGATCCGGCCTGGGATGGCCCCATCGATTTTCCCGAC GCGGTGACGACGCGCGGCGCCAAGCACCTTCTCGAACTGGCCGATATGGTCGACCAGGGCCACCGCGCCGCCATGGTCTA TCTGGTCCAGCGCACCGATGGCGGCGCCGTCGCCATGGCCGCCGACATCGATCCCGCCTATGCCGCCGGCCTGAAGACCG CCATCGCCAAGGGCGTCGAGGTCTATTGCCTGGGCTGCGAGGTCGACCCCTTGCGCGGCATCTGGGTCAACCGCGCCCTG CCGCTGATCGCCCCTTAA
Upstream 100 bases:
>100_bases CCCAGCCGGCCAAGCGCGGCTCGGGCATGGTTGGCCTGGGACAGGCCTTGGCCAATCCGGGCGCCCCCCTTGTTTAACCC TTTGGTGTAAGGACGCCGCC
Downstream 100 bases:
>100_bases CGGAGTCCGCCGCGACGGAGGACGAAACATGCGGGATGTTTTGAAGGTCGGCATGGGCGAAACCCTGAGCTTCGAGGTGC CGCGCGAAAAGACCGTGCCC
Product: sugar fermentation stimulation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MLFPTPLVEGRLVKRYMRFLADVILDDGTAVTAHCANSGSMASVKEPGSPVWLSESPNPDRKLKYTWEIIRVGDAYSGVN TGTPNAVVAEAIAEGKIPPLAGYARLRREVKYGKTSRIDILLEDDAAADDAPARPRCYVEVKNVTLKRDPAWDGPIDFPD AVTTRGAKHLLELADMVDQGHRAAMVYLVQRTDGGAVAMAADIDPAYAAGLKTAIAKGVEVYCLGCEVDPLRGIWVNRAL PLIAP
Sequences:
>Translated_245_residues MLFPTPLVEGRLVKRYMRFLADVILDDGTAVTAHCANSGSMASVKEPGSPVWLSESPNPDRKLKYTWEIIRVGDAYSGVN TGTPNAVVAEAIAEGKIPPLAGYARLRREVKYGKTSRIDILLEDDAAADDAPARPRCYVEVKNVTLKRDPAWDGPIDFPD AVTTRGAKHLLELADMVDQGHRAAMVYLVQRTDGGAVAMAADIDPAYAAGLKTAIAKGVEVYCLGCEVDPLRGIWVNRAL PLIAP >Mature_245_residues MLFPTPLVEGRLVKRYMRFLADVILDDGTAVTAHCANSGSMASVKEPGSPVWLSESPNPDRKLKYTWEIIRVGDAYSGVN TGTPNAVVAEAIAEGKIPPLAGYARLRREVKYGKTSRIDILLEDDAAADDAPARPRCYVEVKNVTLKRDPAWDGPIDFPD AVTTRGAKHLLELADMVDQGHRAAMVYLVQRTDGGAVAMAADIDPAYAAGLKTAIAKGVEVYCLGCEVDPLRGIWVNRAL PLIAP
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family
Homologues:
Organism=Escherichia coli, GI1786340, Length=244, Percent_Identity=40.9836065573771, Blast_Score=168, Evalue=3e-43,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): SFSA_RHORT (Q2RWF6)
Other databases:
- EMBL: CP000230 - RefSeq: YP_425826.1 - STRING: Q2RWF6 - GeneID: 3834717 - GenomeReviews: CP000230_GR - KEGG: rru:Rru_A0735 - NMPDR: fig|1085.1.peg.1610 - eggNOG: COG1489 - HOGENOM: HBG655520 - OMA: NTGSMLN - PhylomeDB: Q2RWF6 - BioCyc: RRUB269796:RRU_A0735-MONOMER - HAMAP: MF_00095 - InterPro: IPR005224 - TIGRFAMs: TIGR00230
Pfam domain/function: PF03749 SfsA
EC number: NA
Molecular weight: Translated: 26443; Mature: 26443
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFPTPLVEGRLVKRYMRFLADVILDDGTAVTAHCANSGSMASVKEPGSPVWLSESPNPD CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCC RKLKYTWEIIRVGDAYSGVNTGTPNAVVAEAIAEGKIPPLAGYARLRREVKYGKTSRIDI CEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEE LLEDDAAADDAPARPRCYVEVKNVTLKRDPAWDGPIDFPDAVTTRGAKHLLELADMVDQG EECCCCCCCCCCCCCEEEEEEECEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC HRAAMVYLVQRTDGGAVAMAADIDPAYAAGLKTAIAKGVEVYCLGCEVDPLRGIWVNRAL CCEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEHHCCC PLIAP CCCCC >Mature Secondary Structure MLFPTPLVEGRLVKRYMRFLADVILDDGTAVTAHCANSGSMASVKEPGSPVWLSESPNPD CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCC RKLKYTWEIIRVGDAYSGVNTGTPNAVVAEAIAEGKIPPLAGYARLRREVKYGKTSRIDI CEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEE LLEDDAAADDAPARPRCYVEVKNVTLKRDPAWDGPIDFPDAVTTRGAKHLLELADMVDQG EECCCCCCCCCCCCCEEEEEEECEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC HRAAMVYLVQRTDGGAVAMAADIDPAYAAGLKTAIAKGVEVYCLGCEVDPLRGIWVNRAL CCEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEHHCCC PLIAP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA