| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592062
Identifier: 83592062
GI number: 83592062
Start: 850905
End: 852290
Strand: Direct
Name: 83592062
Synonym: Rru_A0723
Alternate gene names: NA
Gene position: 850905-852290 (Clockwise)
Preceding gene: 83592058
Following gene: 83592063
Centisome position: 19.55
GC content: 67.68
Gene sequence:
>1386_bases ATGACCCAGGTATCCTCCGCCTCGTTTCGTCCCCCCTCCGGCCGGCTTGATATCGCCGTCGTCGGTACGGGCATTGCGGG CAGTGCCGCGGCTTGGCTGTTGTCAGGCCGACACGCCGTCACGATCTATGAAGCCGACCAGCGGCCGGGGGGGCATACCC ATACGGTCGCGGTGCGCACGCGCGGTGGCGCCAGCATCGTCGTCGACACCGGCTTCATCGTTTATAACGAGCCGAACTAT CCCAATCTGGTCGCGCTGTTTGATCATCTGGGGGTGAAGACGCGGCCCAGCGACATGTCGTTTTCGGTTTCGGCCGATGG CGGCGGGCTGGAGTATTCCGGGGCCGGTCTTGGGGGATTGCTGGCCCAGCCGGTCAATCTCGTGCGCCCGCGTTTCTGGG CGATGATGCGCGATCTCGTGCGCTTTTACCGCGGGGCGCCGGCGGTTCTGGAGGCGCCCGACGCCGACCACCTGACCCTT GGCGACCTGCTTAAGCGCGGCGGCTATTCCCAAGCCTTCATCGAGGATCATCTGCTGCCGATGGGCGGGGCGATCTGGTC GTCTTCGACCCGCGACATGGCCGATTATCCCGCCCGGGCCTTCATCAGCTTCTTTCAGAACCACGCCCTGCTCGACCTGG GGGCGCGGCCGCTGTGGCGGACGGTCGCCGGCGGCAGTCGGGAGTATCTTAACCGCCTGATCGATCGCACCAAGGGGTCG TTCCGCCTGGGGATCGGGGCGCGGCGGATCTTCCGCGACGCCCAGGGTGTGCGCATCGAGGCGACCGATGGCGGCATCAC CCGCCACGATCACGTTCTTATCGCCACCCATGCCGATCAGGCGCTGGCGATGCTGGGCGATCCCTCGGCCGAGGAGGCCC GCCTGCTTGGCCCCTTCGCCTATCAAGCCAATGATGTCTGGCTGCACCAGGACGATACCTTGATGCCGCGCCGCCGCCGC GCCTGGGCGGCCTGGAACGCGCTGACCGACCGGCGCTCGCCCGACAGCCCGCCGACGGTGACCTATTGGATGAACCGGCT TCAGGGGCTTGATCCGGCCCATCCGGTGTTCATCACCCTCAATCCATCCCACGCCCCGGCCGCCGACAGCGTGCTTGGAC GCTACGCCTATGACCATCCGCTGTTCACCCTGGCCACCATCGCCGCCCAAAAAGAGCTGTGGCGTCTGCAGGGCGTCCAA AGGACATGGTTCTGCGGCAGCTATTTCGGCGCCGGCTTCCACGAGGACGCGCTGCAATCGGGCTTGCTGGCGGCCGAACG CCTGGGCGGGGTGCGCCGGCCGTGGACGGTGGAGAAGGAAAACGCCCGCCTTGCCCCCTGGCCGGCGGCCGGCGCCGGCT CGACCGGCCGCGAGGTGGCGGCATGA
Upstream 100 bases:
>100_bases ACCTGACTGATCTCGCGCGTGGCGCGCTGCGTAAACAGGACCATATGGCTTGAGAGATAAAATCGAAAGGCTGGATTTCT TCGTCGTAGGGGAACGCGTT
Downstream 100 bases:
>100_bases GGGGGGGCACGCTCTATCACGGGACCGTCTTGCACAATCGGCTGCGGCCCCGGCGCCATCGCATGTCCTATAAGGTTTTT TCCCTGCTCGTCGATATCGA
Product: amine oxidase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Dehydrogenase; Amine Oxidoreductase; Flavin Containing Amine Oxidoreductase; Flavin-Containing Amine Oxidase; Amino-Oxidase; Oxidoreductase; Amine Oxidase Flavin-Containing Superfamily; FAD-Dependent Oxidoreductase; Amino Oxidase; Flavin Containing Amine Oxidoreductase Protein; Amine Oxidase Flavin-Containing Protein; Amine Oxidase Protein; Amine OxidaseFAD Dependent Oxidoreductase; Amine-Oxidase; Fad Dependent Oxidoreductase; Flavin Containing Amine Oxidoreductas; Lipoprotein
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MTQVSSASFRPPSGRLDIAVVGTGIAGSAAAWLLSGRHAVTIYEADQRPGGHTHTVAVRTRGGASIVVDTGFIVYNEPNY PNLVALFDHLGVKTRPSDMSFSVSADGGGLEYSGAGLGGLLAQPVNLVRPRFWAMMRDLVRFYRGAPAVLEAPDADHLTL GDLLKRGGYSQAFIEDHLLPMGGAIWSSSTRDMADYPARAFISFFQNHALLDLGARPLWRTVAGGSREYLNRLIDRTKGS FRLGIGARRIFRDAQGVRIEATDGGITRHDHVLIATHADQALAMLGDPSAEEARLLGPFAYQANDVWLHQDDTLMPRRRR AWAAWNALTDRRSPDSPPTVTYWMNRLQGLDPAHPVFITLNPSHAPAADSVLGRYAYDHPLFTLATIAAQKELWRLQGVQ RTWFCGSYFGAGFHEDALQSGLLAAERLGGVRRPWTVEKENARLAPWPAAGAGSTGREVAA
Sequences:
>Translated_461_residues MTQVSSASFRPPSGRLDIAVVGTGIAGSAAAWLLSGRHAVTIYEADQRPGGHTHTVAVRTRGGASIVVDTGFIVYNEPNY PNLVALFDHLGVKTRPSDMSFSVSADGGGLEYSGAGLGGLLAQPVNLVRPRFWAMMRDLVRFYRGAPAVLEAPDADHLTL GDLLKRGGYSQAFIEDHLLPMGGAIWSSSTRDMADYPARAFISFFQNHALLDLGARPLWRTVAGGSREYLNRLIDRTKGS FRLGIGARRIFRDAQGVRIEATDGGITRHDHVLIATHADQALAMLGDPSAEEARLLGPFAYQANDVWLHQDDTLMPRRRR AWAAWNALTDRRSPDSPPTVTYWMNRLQGLDPAHPVFITLNPSHAPAADSVLGRYAYDHPLFTLATIAAQKELWRLQGVQ RTWFCGSYFGAGFHEDALQSGLLAAERLGGVRRPWTVEKENARLAPWPAAGAGSTGREVAA >Mature_460_residues TQVSSASFRPPSGRLDIAVVGTGIAGSAAAWLLSGRHAVTIYEADQRPGGHTHTVAVRTRGGASIVVDTGFIVYNEPNYP NLVALFDHLGVKTRPSDMSFSVSADGGGLEYSGAGLGGLLAQPVNLVRPRFWAMMRDLVRFYRGAPAVLEAPDADHLTLG DLLKRGGYSQAFIEDHLLPMGGAIWSSSTRDMADYPARAFISFFQNHALLDLGARPLWRTVAGGSREYLNRLIDRTKGSF RLGIGARRIFRDAQGVRIEATDGGITRHDHVLIATHADQALAMLGDPSAEEARLLGPFAYQANDVWLHQDDTLMPRRRRA WAAWNALTDRRSPDSPPTVTYWMNRLQGLDPAHPVFITLNPSHAPAADSVLGRYAYDHPLFTLATIAAQKELWRLQGVQR TWFCGSYFGAGFHEDALQSGLLAAERLGGVRRPWTVEKENARLAPWPAAGAGSTGREVAA
Specific function: Unknown
COG id: COG2907
COG function: function code R; Predicted NAD/FAD-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50212; Mature: 50081
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQVSSASFRPPSGRLDIAVVGTGIAGSAAAWLLSGRHAVTIYEADQRPGGHTHTVAVRT CCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEEE RGGASIVVDTGFIVYNEPNYPNLVALFDHLGVKTRPSDMSFSVSADGGGLEYSGAGLGGL CCCCEEEEECCEEEECCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCCCCHH LAQPVNLVRPRFWAMMRDLVRFYRGAPAVLEAPDADHLTLGDLLKRGGYSQAFIEDHLLP HHCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHCCCCCHHHHHHCCCC MGGAIWSSSTRDMADYPARAFISFFQNHALLDLGARPLWRTVAGGSREYLNRLIDRTKGS CCCHHCCCCCCCHHHCCHHHHHHHHHCCCEEECCCCHHHHHHCCCCHHHHHHHHHHCCCC FRLGIGARRIFRDAQGVRIEATDGGITRHDHVLIATHADQALAMLGDPSAEEARLLGPFA EEECCCHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCCHHHHCCCCHHHHHEECCEE YQANDVWLHQDDTLMPRRRRAWAAWNALTDRRSPDSPPTVTYWMNRLQGLDPAHPVFITL ECCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEE NPSHAPAADSVLGRYAYDHPLFTLATIAAQKELWRLQGVQRTWFCGSYFGAGFHEDALQS CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCHHHHHH GLLAAERLGGVRRPWTVEKENARLAPWPAAGAGSTGREVAA HHHHHHHHCCCCCCCEEECCCCEECCCCCCCCCCCCCCCCC >Mature Secondary Structure TQVSSASFRPPSGRLDIAVVGTGIAGSAAAWLLSGRHAVTIYEADQRPGGHTHTVAVRT CCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEEE RGGASIVVDTGFIVYNEPNYPNLVALFDHLGVKTRPSDMSFSVSADGGGLEYSGAGLGGL CCCCEEEEECCEEEECCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCCCCHH LAQPVNLVRPRFWAMMRDLVRFYRGAPAVLEAPDADHLTLGDLLKRGGYSQAFIEDHLLP HHCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHCCCCCHHHHHHCCCC MGGAIWSSSTRDMADYPARAFISFFQNHALLDLGARPLWRTVAGGSREYLNRLIDRTKGS CCCHHCCCCCCCHHHCCHHHHHHHHHCCCEEECCCCHHHHHHCCCCHHHHHHHHHHCCCC FRLGIGARRIFRDAQGVRIEATDGGITRHDHVLIATHADQALAMLGDPSAEEARLLGPFA EEECCCHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCCHHHHCCCCHHHHHEECCEE YQANDVWLHQDDTLMPRRRRAWAAWNALTDRRSPDSPPTVTYWMNRLQGLDPAHPVFITL ECCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEE NPSHAPAADSVLGRYAYDHPLFTLATIAAQKELWRLQGVQRTWFCGSYFGAGFHEDALQS CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCHHHHHH GLLAAERLGGVRRPWTVEKENARLAPWPAAGAGSTGREVAA HHHHHHHHCCCCCCCEEECCCCEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA