| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592058
Identifier: 83592058
GI number: 83592058
Start: 847991
End: 848746
Strand: Direct
Name: 83592058
Synonym: Rru_A0719
Alternate gene names: NA
Gene position: 847991-848746 (Clockwise)
Preceding gene: 83592057
Following gene: 83592062
Centisome position: 19.48
GC content: 65.48
Gene sequence:
>756_bases GTGATCTGCAAGGGCGCCCGCAGGCTACTTGGGTGGGGAGGGGTGGCCGCGCTGCTTGGCCTTGGCTGCCTTCCCGCCCT GGCCGCGGCCGATCCGCCGGCGCCGACCCACCGGCTTGTCGTGTCATCGACCTATTGGCCTCCCTATGCCGGATCAGGAT TGCCCGACGGGGGAACGGTCGTCGCTCCGATCGCCGCCGCCTTGCGCGAGATCGGGGTGATTCTGGAGGTCATCTATGTT CCCTGGCCGCGCGCGGTCAGCCTGTTTGCCGAAGGCGATGTCGATGGCTTCCTGCCGACCTATGATCGCCATGGTCAATC CTGTCAGCTGTCCGAGCCGGTTCTTGACACGGTGCTCGGGTTCGTCGAACGGGTCGACGCGCCGGTTCGCTGGGCGTCGT TGAGCGATCTCGCCGGTCTGCGGATCGGGTCGGTCTTGGGCTATTCGAATTCGCCCGAGTTCGACCGCCTGGTCGCCAGC GGGGTGCTGACCACCGAGGTGGTGACGAATGATCTTCGCAATGTTCTGAAGGTTGCCGCCGGACGGCTGGCCCTGGCCAT CATCGATCGCGATGTGTTCGATCACCTGATGGCCCATGACCCTGAAGCGCGGGCGGTGGCCCATCAGGTGCGCTTCAGCC GGCGGGTTTTGGCGATCCGGCCGATTTTTCTTTGCCTGCGCGCCTCGGAGAGCATGGCCGAGGTCCTCGCCCGGATCAAT CGCGCCTTGCGTTTTCAGACCTTGGGCGATCCGTGA
Upstream 100 bases:
>100_bases GCCGTCGCATTTGGCCGCTTGGCGTCGGCCCCAAGGCGTCCTTAATATAGGAGACCATCGCCCGAGAAGCGGGCGACACG ACGCTCAGGAGGATTGGGCG
Downstream 100 bases:
>100_bases ACCCGGGTTGTCAGGGCGCGCTCAAAAGGTCTCGTCAAGACGACCGCCCCGATGGGACGTGTTGAGCGCGCCCGTGATCT TGGCGGGACCGGGCTCAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Amino Acid ABC Transporter Periplasmic Protein; Succinate Dehydrogenase; ABC-Type Amino Acid Transport Periplasmic Protein; ABC-Type Transporter Periplasmic Component
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MICKGARRLLGWGGVAALLGLGCLPALAAADPPAPTHRLVVSSTYWPPYAGSGLPDGGTVVAPIAAALREIGVILEVIYV PWPRAVSLFAEGDVDGFLPTYDRHGQSCQLSEPVLDTVLGFVERVDAPVRWASLSDLAGLRIGSVLGYSNSPEFDRLVAS GVLTTEVVTNDLRNVLKVAAGRLALAIIDRDVFDHLMAHDPEARAVAHQVRFSRRVLAIRPIFLCLRASESMAEVLARIN RALRFQTLGDP
Sequences:
>Translated_251_residues MICKGARRLLGWGGVAALLGLGCLPALAAADPPAPTHRLVVSSTYWPPYAGSGLPDGGTVVAPIAAALREIGVILEVIYV PWPRAVSLFAEGDVDGFLPTYDRHGQSCQLSEPVLDTVLGFVERVDAPVRWASLSDLAGLRIGSVLGYSNSPEFDRLVAS GVLTTEVVTNDLRNVLKVAAGRLALAIIDRDVFDHLMAHDPEARAVAHQVRFSRRVLAIRPIFLCLRASESMAEVLARIN RALRFQTLGDP >Mature_251_residues MICKGARRLLGWGGVAALLGLGCLPALAAADPPAPTHRLVVSSTYWPPYAGSGLPDGGTVVAPIAAALREIGVILEVIYV PWPRAVSLFAEGDVDGFLPTYDRHGQSCQLSEPVLDTVLGFVERVDAPVRWASLSDLAGLRIGSVLGYSNSPEFDRLVAS GVLTTEVVTNDLRNVLKVAAGRLALAIIDRDVFDHLMAHDPEARAVAHQVRFSRRVLAIRPIFLCLRASESMAEVLARIN RALRFQTLGDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26922; Mature: 26922
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MICKGARRLLGWGGVAALLGLGCLPALAAADPPAPTHRLVVSSTYWPPYAGSGLPDGGTV CCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCH VAPIAAALREIGVILEVIYVPWPRAVSLFAEGDVDGFLPTYDRHGQSCQLSEPVLDTVLG HHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHH FVERVDAPVRWASLSDLAGLRIGSVLGYSNSPEFDRLVASGVLTTEVVTNDLRNVLKVAA HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRLALAIIDRDVFDHLMAHDPEARAVAHQVRFSRRVLAIRPIFLCLRASESMAEVLARIN HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH RALRFQTLGDP HHHHHHCCCCC >Mature Secondary Structure MICKGARRLLGWGGVAALLGLGCLPALAAADPPAPTHRLVVSSTYWPPYAGSGLPDGGTV CCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCH VAPIAAALREIGVILEVIYVPWPRAVSLFAEGDVDGFLPTYDRHGQSCQLSEPVLDTVLG HHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHH FVERVDAPVRWASLSDLAGLRIGSVLGYSNSPEFDRLVASGVLTTEVVTNDLRNVLKVAA HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRLALAIIDRDVFDHLMAHDPEARAVAHQVRFSRRVLAIRPIFLCLRASESMAEVLARIN HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH RALRFQTLGDP HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA