| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592024
Identifier: 83592024
GI number: 83592024
Start: 809212
End: 809982
Strand: Reverse
Name: 83592024
Synonym: Rru_A0685
Alternate gene names: NA
Gene position: 809982-809212 (Counterclockwise)
Preceding gene: 83592032
Following gene: 83592018
Centisome position: 18.61
GC content: 68.35
Gene sequence:
>771_bases ATGGACCCGCTCGATCTCACCTTTCTCGTCGTCGTCTTCCTGGTAGCCGGCTTGGTCAAGGGCCTGCTTGGCCTGGGATT GCCGCTGATCGCCATGGGCTTGATGAGCCTGCGCCTGCCGCCGGCCGAGGCCGCCGCCCTGGTCGTCGTGCCTTCGCTTG TCACGAATATCTGGCAGATGGTGGTCGGCCCCCATCTGCGGATGCTGATCGGCCGGCTGACACCGATGATCGCCGGCATC GCCCTTGGCACCTGGATCGGGGCGCTGGTGATCGGCACGGCCGCCCATAAGGCCGGCGGGGCGGCCAGCGCCCTGGTCGG CCTGTTGCTGGCGCTTTACGCCCTGTATGGCTTGGTCGGCCTGCCTTTGCCCAATCCCGTCCGCGTCCCGTGGCGGCTGA CCTGGGGCCTGGGATCGGGCCTTTTGACCGGGCTTTTGACGGCGGCCACCGGGGTGTTCACCCTGCCCACCGTGCCCTAT CTGCAAAGCCTGCGGCTGGAGCGCGACGCCCTGATCCAGGCCCTGGGTTTGGCCTTCACCGTATCGACCCTGGCCCTGGC GGCGCTGTTGCGTGGAAGCGGCCACTTGAACGGCGACCTTGGCCTCGGCGCGGGGATCGCCCTGGCCGCGGCCCTGAGCG GAACGGCGGCCGGCGGCATCGTCCGCCGCCATATCCCGCCGGCGCGCTTCCGTCGCGGGTTCTTCCTGTTCCTGCTGGTG CTTGGCGTCGTGCTGGTTTTTCAGACGGCGCTTAAAAGCGGCTGGATTTAG
Upstream 100 bases:
>100_bases ATCAGATCGAACCGCATCGGCTTGTGCCTTCGGATAAGACGAAGCCATTCTTCGCAAATCCCACATTGCGGGCCTTGGGA AAAGCGGTCAAGGATGGGCC
Downstream 100 bases:
>100_bases CCGCGCAGAGGGACCTTGGTCCCCGCTTTTCGGCGCCTGTCGTTGAATTGCCGAGAGGCGCCGCCTCTCGGCGCTCTCGG CGAAGGGCCCTTGGCCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MDPLDLTFLVVVFLVAGLVKGLLGLGLPLIAMGLMSLRLPPAEAAALVVVPSLVTNIWQMVVGPHLRMLIGRLTPMIAGI ALGTWIGALVIGTAAHKAGGAASALVGLLLALYALYGLVGLPLPNPVRVPWRLTWGLGSGLLTGLLTAATGVFTLPTVPY LQSLRLERDALIQALGLAFTVSTLALAALLRGSGHLNGDLGLGAGIALAAALSGTAAGGIVRRHIPPARFRRGFFLFLLV LGVVLVFQTALKSGWI
Sequences:
>Translated_256_residues MDPLDLTFLVVVFLVAGLVKGLLGLGLPLIAMGLMSLRLPPAEAAALVVVPSLVTNIWQMVVGPHLRMLIGRLTPMIAGI ALGTWIGALVIGTAAHKAGGAASALVGLLLALYALYGLVGLPLPNPVRVPWRLTWGLGSGLLTGLLTAATGVFTLPTVPY LQSLRLERDALIQALGLAFTVSTLALAALLRGSGHLNGDLGLGAGIALAAALSGTAAGGIVRRHIPPARFRRGFFLFLLV LGVVLVFQTALKSGWI >Mature_256_residues MDPLDLTFLVVVFLVAGLVKGLLGLGLPLIAMGLMSLRLPPAEAAALVVVPSLVTNIWQMVVGPHLRMLIGRLTPMIAGI ALGTWIGALVIGTAAHKAGGAASALVGLLLALYALYGLVGLPLPNPVRVPWRLTWGLGSGLLTGLLTAATGVFTLPTVPY LQSLRLERDALIQALGLAFTVSTLALAALLRGSGHLNGDLGLGAGIALAAALSGTAAGGIVRRHIPPARFRRGFFLFLLV LGVVLVFQTALKSGWI
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26388; Mature: 26388
Theoretical pI: Translated: 12.02; Mature: 12.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPLDLTFLVVVFLVAGLVKGLLGLGLPLIAMGLMSLRLPPAEAAALVVVPSLVTNIWQM CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VVGPHLRMLIGRLTPMIAGIALGTWIGALVIGTAAHKAGGAASALVGLLLALYALYGLVG HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC LPLPNPVRVPWRLTWGLGSGLLTGLLTAATGVFTLPTVPYLQSLRLERDALIQALGLAFT CCCCCCCCCCEEEECCCHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH VSTLALAALLRGSGHLNGDLGLGAGIALAAALSGTAAGGIVRRHIPPARFRRGFFLFLLV HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHCCHHHHCCCHHHHHHHHHHHHHH LGVVLVFQTALKSGWI HHHHHHHHHHHHCCCC >Mature Secondary Structure MDPLDLTFLVVVFLVAGLVKGLLGLGLPLIAMGLMSLRLPPAEAAALVVVPSLVTNIWQM CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VVGPHLRMLIGRLTPMIAGIALGTWIGALVIGTAAHKAGGAASALVGLLLALYALYGLVG HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC LPLPNPVRVPWRLTWGLGSGLLTGLLTAATGVFTLPTVPYLQSLRLERDALIQALGLAFT CCCCCCCCCCEEEECCCHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH VSTLALAALLRGSGHLNGDLGLGAGIALAAALSGTAAGGIVRRHIPPARFRRGFFLFLLV HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHCCHHHHCCCHHHHHHHHHHHHHH LGVVLVFQTALKSGWI HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA