| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is gor [H]
Identifier: 83592021
GI number: 83592021
Start: 804843
End: 806222
Strand: Direct
Name: gor [H]
Synonym: Rru_A0682
Alternate gene names: 83592021
Gene position: 804843-806222 (Clockwise)
Preceding gene: 83592020
Following gene: 83592022
Centisome position: 18.49
GC content: 65.87
Gene sequence:
>1380_bases ATGGCCGATTACGATTACGACCTTCTTACCATCGGCGCCGGTTCCGGCGGCGTCCGGGCGTCGCGGCTGGCCGGGGGATT TGGCGCGCGGGTCGCCGTGGTCGAGGGCAGCCGCATCGGCGGCACCTGCGTCATGCGCGGCTGCGTGCCCAAGAAGCTGT TGGTCTATGGCGCCCAATACGCCAATGATCTGGAAGACATGATCGGCTACGGCTGGTCGATGGGCGGCGTCGCCTTTGAT TGGCCAAGCCTGATCACCGCCAAGAACCGCGAGCTTGATCGCCTGGAAGGCGTCTATCGCACGATGCTGCGCAACGGCAA CGTCGCCTTGCTCGAGGGGCGGGCCCGCTTCCTCGATGCCCATAGCGTCGATATCGACGGCAAGACCGTCACCGCCGACA AGATCCTGATCGCCGTGGGCGGCTGGCCGCAGATGCCGGTGATTCCGGGCATCGAACACGCCATCACCTCGAACGAGGCG CTTGATCTGATGGTCATGCCCGAACGCCTGACCATCGTTGGCGGCGGCTTCATCGCCGTGGAATTCGCGTCCATCTTCAA TGCTCTGGGCGTCGATGTCTCGGTCGTCATCCGCAAGGACAAGATACTGCGCGGCTTTGACGCCGATATCCGCGATACCC TGACCGAGGAATTGGTCCGTCGCGGCATCACCATCGTGCCCGGCACGGTGATCAACCGCATCGACAAGCGCCCGGGCGGC GGCTATCGCCTGATCCGCACCCCGGGCGAGGCCATCGATACGGATCTGGTGATGTATGCCACCGGCCGGGCGCCCAATAC CGCCGGCCTGGGGCTGGAGGCGGCGGGGGTCAAGGTCGCGGCCTCGGGGGCGGTGATCGTCGATGAATGGAATCGCACCA CTGTCGACACCATCTATGCCATTGGCGACGTCACCGACCGCATCGCCCTGACCCCGGTGGCGATCAACGAGGCGATCGCC TTCGCCCACACCGTGTTCAACGATACGCCCCGGGTGATGGATTACGAGAACGTGGCTTCGGCCGTGTTCAGCCAGCCGCC GGTGGGAACGGTGGGGCTGACCGAGGAGCAGGCCCGCGCCCGGGGTCCGGTGCGCATCTTCCGCACCCGCTTCCGCGCCA TGAAGCACGTGCTGGCCGGGCGCGACGAGAAAACGATGATGAAGCTGGTGGTCGATGCCCGCACCGATCGGGTGCTTGGC TGCCACATGGTTGGCGCCGACGCCCCCGAGATCATCCAGGGGCTGGCGGTGGCCTTGAAATGCGGGGCGACCAAGGCCCA GTTCGATGCCACCATCGGCATCCATCCGACCGCCGCCGAGGAATTCGTGACCATGCGCGACCCGGTGCCCGAGCCGGTTT TCGCCCAGCCCGCCGATTAA
Upstream 100 bases:
>100_bases TCCCGATCCACGCGGTATGTGAATTGTGGTGTCGGGCGCGGCCCCGCCGCATATGGTAGGCTGGCTGGCTTTTTCTATTC CTCGCTGACGGACGTGCACC
Downstream 100 bases:
>100_bases GGCGCCCGTTAAAGCCCTTGGGCCCTTTCCGTTGGGCGGCCGGTGACCAGCGCCAAGCGGGGGAGGGCGCCGTTTTTTCT GGTCAGGACGAAAGGGCTTC
Product: NADPH-glutathione reductase
Products: NA
Alternate protein names: GR; GRase [H]
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MADYDYDLLTIGAGSGGVRASRLAGGFGARVAVVEGSRIGGTCVMRGCVPKKLLVYGAQYANDLEDMIGYGWSMGGVAFD WPSLITAKNRELDRLEGVYRTMLRNGNVALLEGRARFLDAHSVDIDGKTVTADKILIAVGGWPQMPVIPGIEHAITSNEA LDLMVMPERLTIVGGGFIAVEFASIFNALGVDVSVVIRKDKILRGFDADIRDTLTEELVRRGITIVPGTVINRIDKRPGG GYRLIRTPGEAIDTDLVMYATGRAPNTAGLGLEAAGVKVAASGAVIVDEWNRTTVDTIYAIGDVTDRIALTPVAINEAIA FAHTVFNDTPRVMDYENVASAVFSQPPVGTVGLTEEQARARGPVRIFRTRFRAMKHVLAGRDEKTMMKLVVDARTDRVLG CHMVGADAPEIIQGLAVALKCGATKAQFDATIGIHPTAAEEFVTMRDPVPEPVFAQPAD
Sequences:
>Translated_459_residues MADYDYDLLTIGAGSGGVRASRLAGGFGARVAVVEGSRIGGTCVMRGCVPKKLLVYGAQYANDLEDMIGYGWSMGGVAFD WPSLITAKNRELDRLEGVYRTMLRNGNVALLEGRARFLDAHSVDIDGKTVTADKILIAVGGWPQMPVIPGIEHAITSNEA LDLMVMPERLTIVGGGFIAVEFASIFNALGVDVSVVIRKDKILRGFDADIRDTLTEELVRRGITIVPGTVINRIDKRPGG GYRLIRTPGEAIDTDLVMYATGRAPNTAGLGLEAAGVKVAASGAVIVDEWNRTTVDTIYAIGDVTDRIALTPVAINEAIA FAHTVFNDTPRVMDYENVASAVFSQPPVGTVGLTEEQARARGPVRIFRTRFRAMKHVLAGRDEKTMMKLVVDARTDRVLG CHMVGADAPEIIQGLAVALKCGATKAQFDATIGIHPTAAEEFVTMRDPVPEPVFAQPAD >Mature_458_residues ADYDYDLLTIGAGSGGVRASRLAGGFGARVAVVEGSRIGGTCVMRGCVPKKLLVYGAQYANDLEDMIGYGWSMGGVAFDW PSLITAKNRELDRLEGVYRTMLRNGNVALLEGRARFLDAHSVDIDGKTVTADKILIAVGGWPQMPVIPGIEHAITSNEAL DLMVMPERLTIVGGGFIAVEFASIFNALGVDVSVVIRKDKILRGFDADIRDTLTEELVRRGITIVPGTVINRIDKRPGGG YRLIRTPGEAIDTDLVMYATGRAPNTAGLGLEAAGVKVAASGAVIVDEWNRTTVDTIYAIGDVTDRIALTPVAINEAIAF AHTVFNDTPRVMDYENVASAVFSQPPVGTVGLTEEQARARGPVRIFRTRFRAMKHVLAGRDEKTMMKLVVDARTDRVLGC HMVGADAPEIIQGLAVALKCGATKAQFDATIGIHPTAAEEFVTMRDPVPEPVFAQPAD
Specific function: Maintains high levels of reduced glutathione in the cytosol [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI50301238, Length=459, Percent_Identity=40.0871459694989, Blast_Score=315, Evalue=4e-86, Organism=Homo sapiens, GI148277065, Length=474, Percent_Identity=34.1772151898734, Blast_Score=239, Evalue=4e-63, Organism=Homo sapiens, GI22035672, Length=472, Percent_Identity=35.8050847457627, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI148277071, Length=474, Percent_Identity=34.1772151898734, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI33519430, Length=474, Percent_Identity=34.1772151898734, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI33519428, Length=474, Percent_Identity=34.1772151898734, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI33519426, Length=474, Percent_Identity=34.1772151898734, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI291045266, Length=474, Percent_Identity=32.7004219409283, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI291045268, Length=470, Percent_Identity=30.8510638297872, Blast_Score=191, Evalue=9e-49, Organism=Homo sapiens, GI91199540, Length=457, Percent_Identity=28.6652078774617, Blast_Score=162, Evalue=8e-40, Organism=Escherichia coli, GI1789915, Length=429, Percent_Identity=40.3263403263403, Blast_Score=328, Evalue=4e-91, Organism=Escherichia coli, GI1786307, Length=464, Percent_Identity=28.2327586206897, Blast_Score=174, Evalue=1e-44, Organism=Escherichia coli, GI87081717, Length=449, Percent_Identity=29.1759465478842, Blast_Score=163, Evalue=2e-41, Organism=Escherichia coli, GI87082354, Length=452, Percent_Identity=26.7699115044248, Blast_Score=162, Evalue=3e-41, Organism=Caenorhabditis elegans, GI71983419, Length=454, Percent_Identity=39.647577092511, Blast_Score=296, Evalue=2e-80, Organism=Caenorhabditis elegans, GI71983429, Length=454, Percent_Identity=39.647577092511, Blast_Score=296, Evalue=2e-80, Organism=Caenorhabditis elegans, GI17557007, Length=468, Percent_Identity=32.6923076923077, Blast_Score=247, Evalue=9e-66, Organism=Caenorhabditis elegans, GI71982272, Length=483, Percent_Identity=30.8488612836439, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI32565766, Length=460, Percent_Identity=28.4782608695652, Blast_Score=174, Evalue=7e-44, Organism=Saccharomyces cerevisiae, GI6325166, Length=464, Percent_Identity=34.9137931034483, Blast_Score=277, Evalue=2e-75, Organism=Saccharomyces cerevisiae, GI6321091, Length=465, Percent_Identity=28.1720430107527, Blast_Score=155, Evalue=9e-39, Organism=Saccharomyces cerevisiae, GI6325240, Length=467, Percent_Identity=28.6937901498929, Blast_Score=142, Evalue=1e-34, Organism=Drosophila melanogaster, GI17737741, Length=483, Percent_Identity=33.5403726708075, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI24640549, Length=481, Percent_Identity=34.0956340956341, Blast_Score=231, Evalue=6e-61, Organism=Drosophila melanogaster, GI24640553, Length=481, Percent_Identity=34.0956340956341, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI24640551, Length=482, Percent_Identity=33.8174273858921, Blast_Score=231, Evalue=1e-60, Organism=Drosophila melanogaster, GI21358499, Length=480, Percent_Identity=29.1666666666667, Blast_Score=173, Evalue=2e-43,
Paralogues:
None
Copy number: 650 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.7 [H]
Molecular weight: Translated: 49168; Mature: 49037
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADYDYDLLTIGAGSGGVRASRLAGGFGARVAVVEGSRIGGTCVMRGCVPKKLLVYGAQY CCCCCCEEEEEECCCCCCCHHHHCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHCHHH ANDLEDMIGYGWSMGGVAFDWPSLITAKNRELDRLEGVYRTMLRNGNVALLEGRARFLDA HHHHHHHHHCCCCCCCEEECCCHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEC HSVDIDGKTVTADKILIAVGGWPQMPVIPGIEHAITSNEALDLMVMPERLTIVGGGFIAV EEECCCCCEEEECEEEEEECCCCCCCCCCCCHHHHCCCCCEEEEEECCEEEEEECCCCCH EFASIFNALGVDVSVVIRKDKILRGFDADIRDTLTEELVRRGITIVPGTVINRIDKRPGG HHHHHHHHHCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHCCCCC GYRLIRTPGEAIDTDLVMYATGRAPNTAGLGLEAAGVKVAASGAVIVDEWNRTTVDTIYA CEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEECCEEEEECCEEEEECCCCCCHHHEEE IGDVTDRIALTPVAINEAIAFAHTVFNDTPRVMDYENVASAVFSQPPVGTVGLTEEQARA ECCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH RGPVRIFRTRFRAMKHVLAGRDEKTMMKLVVDARTDRVLGCHMVGADAPEIIQGLAVALK CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHH CGATKAQFDATIGIHPTAAEEFVTMRDPVPEPVFAQPAD CCCCCHHCCEEECCCCCCHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ADYDYDLLTIGAGSGGVRASRLAGGFGARVAVVEGSRIGGTCVMRGCVPKKLLVYGAQY CCCCCEEEEEECCCCCCCHHHHCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHCHHH ANDLEDMIGYGWSMGGVAFDWPSLITAKNRELDRLEGVYRTMLRNGNVALLEGRARFLDA HHHHHHHHHCCCCCCCEEECCCHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEC HSVDIDGKTVTADKILIAVGGWPQMPVIPGIEHAITSNEALDLMVMPERLTIVGGGFIAV EEECCCCCEEEECEEEEEECCCCCCCCCCCCHHHHCCCCCEEEEEECCEEEEEECCCCCH EFASIFNALGVDVSVVIRKDKILRGFDADIRDTLTEELVRRGITIVPGTVINRIDKRPGG HHHHHHHHHCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHCCCCC GYRLIRTPGEAIDTDLVMYATGRAPNTAGLGLEAAGVKVAASGAVIVDEWNRTTVDTIYA CEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEECCEEEEECCEEEEECCCCCCHHHEEE IGDVTDRIALTPVAINEAIAFAHTVFNDTPRVMDYENVASAVFSQPPVGTVGLTEEQARA ECCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH RGPVRIFRTRFRAMKHVLAGRDEKTMMKLVVDARTDRVLGCHMVGADAPEIIQGLAVALK CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHH CGATKAQFDATIGIHPTAAEEFVTMRDPVPEPVFAQPAD CCCCCHHCCEEECCCCCCHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1849605; 10984043 [H]