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The map label for this gene is pdtaS [H]

Identifier: 83592003

GI number: 83592003

Start: 787203

End: 788237

Strand: Reverse

Name: pdtaS [H]

Synonym: Rru_A0664

Alternate gene names: 83592003

Gene position: 788237-787203 (Counterclockwise)

Preceding gene: 83592004

Following gene: 83592002

Centisome position: 18.11

GC content: 66.86

Gene sequence:

>1035_bases
GTGACACACGCCAGCCCCCGTGTCCTTTATATCGATGACGATCCAGGGACGGTCCGGCTGGCTCAGAAGCGGCTTGAACG
TCACAATCTGATCGTCGAAGTCGCGCTCAGCGCCCGCGAGGGGCTGGCCCGCATCGATCAGGGCGGCATCGACGTGGTCG
CCCTTGATCACGAGATGCCCGGCGGCACCGGCATGGAGGTGCTGTCGGCCCTGGCCGAGCGCGAGGACGCGCCGCCGGTG
GTCTATGTCACCGGAACGGGCGACACCGGGGTGGCGGTGGCGGCGATGAAGGCCGGCGCCTCGGACTATGTGGTCAAGGA
TGTCGGCGGCGCCTTCCTCGACCTGCTGTCGATCGCCATCGATCAGGCCCTGGAGATCGCCCAGGCGCGCCGCGAAAGAA
GCCGGGCCGAGCGCGAGGTCCGCGAGGCCAAGGATCGGGCCGAGATCTTGCTGCGCGAGGTCAACCACCGCGTCGCCAAT
AGTCTGGCCCTGGTCGCCGCCCTGGTCCGCATGCAAGGTCAGGTGGTCGAAGACCCCAAGGCGCGCGCCGCCCTGGAGGA
AACCTGGGGCCGCATCGTCGCCGTCGGCGGCATCCATCGCCGATTGTACACCTCGGAAGACGTGCGCTTCGTCGGCATCG
ACGAATACCTGAAAAGCTTGGTCGCCGACATCGAATCGGCCATGACCTCGGCCAGGTGCCACCACACCATCCGCGTCGAC
ACCCAGCCGGTGCTCATCCCCACCGACAAGGCCGTCTCGGTGGGCGTCATCGTGTCCGAATTGCTGACCAACGCCTGTAA
ATACGCCTATCCCGAGGGCAGTTGCGGCGAAATCCGCCTGCGCTGCCACCAAGAAGGCGCCGAGGTCCTTCTTGACGTCG
AGGATTTCGGTCAGGGCCGCGATCCGGGCGCGCCGCCCCGGGGAACCGGCCTTGGCACCCGCATCATGGCCGCCATGGCC
AAAAGCCTGGGCAGCGAGGTGACCTATCCCGCGGTTTCCCGAGGCACAAAGGCGCAACTGCGCTTTTCCCTCTGA

Upstream 100 bases:

>100_bases
CGTCTATATTACAAAGCCGGTGAATTACGAAAATTTCGCCAATGCCATCCGCCAACTTGGACTGTTCTTTTCCGTCATGC
AGGTCCCGGAGACCAACTAA

Downstream 100 bases:

>100_bases
CCCCGCGCCCCTTTTTCAGTCTTCACGCCCCGCCGGCCAAGTGCCCTTCGGGGGGATTATTGACTTTTTCACTCTTTCGC
CCTATGTAGGGTTCATCAAA

Product: signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MTHASPRVLYIDDDPGTVRLAQKRLERHNLIVEVALSAREGLARIDQGGIDVVALDHEMPGGTGMEVLSALAEREDAPPV
VYVTGTGDTGVAVAAMKAGASDYVVKDVGGAFLDLLSIAIDQALEIAQARRERSRAEREVREAKDRAEILLREVNHRVAN
SLALVAALVRMQGQVVEDPKARAALEETWGRIVAVGGIHRRLYTSEDVRFVGIDEYLKSLVADIESAMTSARCHHTIRVD
TQPVLIPTDKAVSVGVIVSELLTNACKYAYPEGSCGEIRLRCHQEGAEVLLDVEDFGQGRDPGAPPRGTGLGTRIMAAMA
KSLGSEVTYPAVSRGTKAQLRFSL

Sequences:

>Translated_344_residues
MTHASPRVLYIDDDPGTVRLAQKRLERHNLIVEVALSAREGLARIDQGGIDVVALDHEMPGGTGMEVLSALAEREDAPPV
VYVTGTGDTGVAVAAMKAGASDYVVKDVGGAFLDLLSIAIDQALEIAQARRERSRAEREVREAKDRAEILLREVNHRVAN
SLALVAALVRMQGQVVEDPKARAALEETWGRIVAVGGIHRRLYTSEDVRFVGIDEYLKSLVADIESAMTSARCHHTIRVD
TQPVLIPTDKAVSVGVIVSELLTNACKYAYPEGSCGEIRLRCHQEGAEVLLDVEDFGQGRDPGAPPRGTGLGTRIMAAMA
KSLGSEVTYPAVSRGTKAQLRFSL
>Mature_343_residues
THASPRVLYIDDDPGTVRLAQKRLERHNLIVEVALSAREGLARIDQGGIDVVALDHEMPGGTGMEVLSALAEREDAPPVV
YVTGTGDTGVAVAAMKAGASDYVVKDVGGAFLDLLSIAIDQALEIAQARRERSRAEREVREAKDRAEILLREVNHRVANS
LALVAALVRMQGQVVEDPKARAALEETWGRIVAVGGIHRRLYTSEDVRFVGIDEYLKSLVADIESAMTSARCHHTIRVDT
QPVLIPTDKAVSVGVIVSELLTNACKYAYPEGSCGEIRLRCHQEGAEVLLDVEDFGQGRDPGAPPRGTGLGTRIMAAMAK
SLGSEVTYPAVSRGTKAQLRFSL

Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR022066
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 37067; Mature: 36936

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHASPRVLYIDDDPGTVRLAQKRLERHNLIVEVALSAREGLARIDQGGIDVVALDHEMP
CCCCCCCEEEEECCCCHHHHHHHHHHHCCEEEEEEHHHHHHHHHHCCCCEEEEEECCCCC
GGTGMEVLSALAEREDAPPVVYVTGTGDTGVAVAAMKAGASDYVVKDVGGAFLDLLSIAI
CCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
DQALEIAQARRERSRAEREVREAKDRAEILLREVNHRVANSLALVAALVRMQGQVVEDPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
ARAALEETWGRIVAVGGIHRRLYTSEDVRFVGIDEYLKSLVADIESAMTSARCHHTIRVD
HHHHHHHHHCCEEEECCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEEC
TQPVLIPTDKAVSVGVIVSELLTNACKYAYPEGSCGEIRLRCHQEGAEVLLDVEDFGQGR
CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEHHHCCCCC
DPGAPPRGTGLGTRIMAAMAKSLGSEVTYPAVSRGTKAQLRFSL
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEECC
>Mature Secondary Structure 
THASPRVLYIDDDPGTVRLAQKRLERHNLIVEVALSAREGLARIDQGGIDVVALDHEMP
CCCCCCEEEEECCCCHHHHHHHHHHHCCEEEEEEHHHHHHHHHHCCCCEEEEEECCCCC
GGTGMEVLSALAEREDAPPVVYVTGTGDTGVAVAAMKAGASDYVVKDVGGAFLDLLSIAI
CCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
DQALEIAQARRERSRAEREVREAKDRAEILLREVNHRVANSLALVAALVRMQGQVVEDPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
ARAALEETWGRIVAVGGIHRRLYTSEDVRFVGIDEYLKSLVADIESAMTSARCHHTIRVD
HHHHHHHHHCCEEEECCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEEC
TQPVLIPTDKAVSVGVIVSELLTNACKYAYPEGSCGEIRLRCHQEGAEVLLDVEDFGQGR
CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEHHHCCCCC
DPGAPPRGTGLGTRIMAAMAKSLGSEVTYPAVSRGTKAQLRFSL
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]