| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591981
Identifier: 83591981
GI number: 83591981
Start: 763615
End: 764709
Strand: Direct
Name: 83591981
Synonym: Rru_A0642
Alternate gene names: NA
Gene position: 763615-764709 (Clockwise)
Preceding gene: 83591980
Following gene: 83591982
Centisome position: 17.54
GC content: 69.32
Gene sequence:
>1095_bases GTGGGCGCTGAGCCGTCCCGGCCCCCGGGCGCCGCAGTCGAGGCGCTGATCGCCCGCCTGCGCAGCGGGCCGCTGCCGGT CGAAGACTGGATGGCGGCCTGTCTGGGCGAGTATTACGCCCGGGGCGATGTGCTTGGCGCCGGCGGCGATTTCATCACCG CCCCGGAATGCACCCAGATCTTTGGTGAACTGCTTGGCCTGTGGTCGGCGGTGGTCTGGCAGGCGATGGGCAGCCCCGAG CGGATCAATCTGGTCGAACTGGGGCCCGGGCGCGGCACGCTGATGGCCGATGCCCTGCGCGCCCTGGCGCCGGTCCCGGC TTTTCGCCGCGCCCTGTCGGTCCATCTGGTGGAGACCAGCCCCGGCCTGCGCGCCCGCCAGAAGCAAAAGCTGCGCGCCA GCGGCGTGACGGTTTTCTGGCACGAGCGCCTCGACACCGTGCCGTCGGGGCCGATGATCGTGCTCGCCAATGAATTCCTA GATGCCCTGCCCATCCGCCAGTATCTGCGCGACGCCGAGGGCTGGCGCGAGCGGCTGGTCGGCTTGGCCGGGGAGGGGCC CGCCCTGACGTTTACCCAGGGACCTTTGCTGGGCGACCCACCGCCCTTGGCCCAACCGGCCCATCTGCAGGCGCGGGTCG GCGAGGAGATCGAGGTTTGTCCGCAAGCCCAGGCGGTGGTCGCCCAGGTGGCGGCGCGGCTGGCCGCCGATGGCGGGGCC GGGTTGTTCCTGGATTATGGTCCGGCCCATAGCGCCCCGGGCGACAGCCTGCAGGCCCTGCGCCGTCACCGCTTCGCCGC CGTTCTTGAAAACCCCGGGGCGGTCGATCTGACCGCCCATGTCGATTTCCAGGCGATGGCCCGGGTGGCCGCCGCCGCCG GGGCGGCGGTGGACGGCATCGTTCAGCAAGGGCCGTTCTTGCAATCGCTCGGATTGGAGGCGCGGGCCGGTGTTCTGATG GCCAATGCGGCTACCGACCAAAAGCGCGAGATACGATTTGCCGTCCGTCGCCTGATTGATTCTTCGGAAATGGGCACTTT ATTTAAGGTCTTGGGACTGCGGTCTCCAAGCATGGCCCGCCTTCCGGGATTCTGA
Upstream 100 bases:
>100_bases CTGGGCGTGACCATGGGCCAGATTCTGTCGCTGCCGATGATCCTGGCCGGTATCGTGGTTTTCGTGGTGGCCCGCCGCGC CAAGCCGCTGGCGGTTCCCG
Downstream 100 bases:
>100_bases CACCCGTTTCAAGGGATAATTGCCCCGATGATCACCGTTTCCTCGTTGAACGCCCTGACCAATGTCCGGCACGGCTTTTT TACCCGTAACCGGGGCGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MGAEPSRPPGAAVEALIARLRSGPLPVEDWMAACLGEYYARGDVLGAGGDFITAPECTQIFGELLGLWSAVVWQAMGSPE RINLVELGPGRGTLMADALRALAPVPAFRRALSVHLVETSPGLRARQKQKLRASGVTVFWHERLDTVPSGPMIVLANEFL DALPIRQYLRDAEGWRERLVGLAGEGPALTFTQGPLLGDPPPLAQPAHLQARVGEEIEVCPQAQAVVAQVAARLAADGGA GLFLDYGPAHSAPGDSLQALRRHRFAAVLENPGAVDLTAHVDFQAMARVAAAAGAAVDGIVQQGPFLQSLGLEARAGVLM ANAATDQKREIRFAVRRLIDSSEMGTLFKVLGLRSPSMARLPGF
Sequences:
>Translated_364_residues MGAEPSRPPGAAVEALIARLRSGPLPVEDWMAACLGEYYARGDVLGAGGDFITAPECTQIFGELLGLWSAVVWQAMGSPE RINLVELGPGRGTLMADALRALAPVPAFRRALSVHLVETSPGLRARQKQKLRASGVTVFWHERLDTVPSGPMIVLANEFL DALPIRQYLRDAEGWRERLVGLAGEGPALTFTQGPLLGDPPPLAQPAHLQARVGEEIEVCPQAQAVVAQVAARLAADGGA GLFLDYGPAHSAPGDSLQALRRHRFAAVLENPGAVDLTAHVDFQAMARVAAAAGAAVDGIVQQGPFLQSLGLEARAGVLM ANAATDQKREIRFAVRRLIDSSEMGTLFKVLGLRSPSMARLPGF >Mature_363_residues GAEPSRPPGAAVEALIARLRSGPLPVEDWMAACLGEYYARGDVLGAGGDFITAPECTQIFGELLGLWSAVVWQAMGSPER INLVELGPGRGTLMADALRALAPVPAFRRALSVHLVETSPGLRARQKQKLRASGVTVFWHERLDTVPSGPMIVLANEFLD ALPIRQYLRDAEGWRERLVGLAGEGPALTFTQGPLLGDPPPLAQPAHLQARVGEEIEVCPQAQAVVAQVAARLAADGGAG LFLDYGPAHSAPGDSLQALRRHRFAAVLENPGAVDLTAHVDFQAMARVAAAAGAAVDGIVQQGPFLQSLGLEARAGVLMA NAATDQKREIRFAVRRLIDSSEMGTLFKVLGLRSPSMARLPGF
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21396487, Length=382, Percent_Identity=34.0314136125654, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI145701028, Length=358, Percent_Identity=27.0949720670391, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI193211224, Length=400, Percent_Identity=32.5, Blast_Score=192, Evalue=2e-49, Organism=Drosophila melanogaster, GI24645885, Length=380, Percent_Identity=36.8421052631579, Blast_Score=209, Evalue=3e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38545; Mature: 38414
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAEPSRPPGAAVEALIARLRSGPLPVEDWMAACLGEYYARGDVLGAGGDFITAPECTQI CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHH FGELLGLWSAVVWQAMGSPERINLVELGPGRGTLMADALRALAPVPAFRRALSVHLVETS HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHEEEEEECC PGLRARQKQKLRASGVTVFWHERLDTVPSGPMIVLANEFLDALPIRQYLRDAEGWRERLV CCCHHHHHHHHHHCCCEEEEECHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH GLAGEGPALTFTQGPLLGDPPPLAQPAHLQARVGEEIEVCPQAQAVVAQVAARLAADGGA CCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCCCC GLFLDYGPAHSAPGDSLQALRRHRFAAVLENPGAVDLTAHVDFQAMARVAAAAGAAVDGI EEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH VQQGPFLQSLGLEARAGVLMANAATDQKREIRFAVRRLIDSSEMGTLFKVLGLRSPSMAR HHCCCHHHHHCCCHHCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC LPGF CCCC >Mature Secondary Structure GAEPSRPPGAAVEALIARLRSGPLPVEDWMAACLGEYYARGDVLGAGGDFITAPECTQI CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHH FGELLGLWSAVVWQAMGSPERINLVELGPGRGTLMADALRALAPVPAFRRALSVHLVETS HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHEEEEEECC PGLRARQKQKLRASGVTVFWHERLDTVPSGPMIVLANEFLDALPIRQYLRDAEGWRERLV CCCHHHHHHHHHHCCCEEEEECHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH GLAGEGPALTFTQGPLLGDPPPLAQPAHLQARVGEEIEVCPQAQAVVAQVAARLAADGGA CCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCCCC GLFLDYGPAHSAPGDSLQALRRHRFAAVLENPGAVDLTAHVDFQAMARVAAAAGAAVDGI EEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH VQQGPFLQSLGLEARAGVLMANAATDQKREIRFAVRRLIDSSEMGTLFKVLGLRSPSMAR HHCCCHHHHHCCCHHCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC LPGF CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA