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The map label for this gene is yadH [H]

Identifier: 83591979

GI number: 83591979

Start: 761873

End: 762685

Strand: Direct

Name: yadH [H]

Synonym: Rru_A0640

Alternate gene names: 83591979

Gene position: 761873-762685 (Clockwise)

Preceding gene: 83591971

Following gene: 83591980

Centisome position: 17.5

GC content: 60.15

Gene sequence:

>813_bases
GTGAAGGACGCCAGCGCTGGCTTTTCCATCCCCCAACCCCGTCATATCGGGGCGGTCAACTGGCTTGGCCTGTGGGAACT
CTATCTGAAGGAAGTGCGCCGCTTCCTCAAGGTCTACCTGCAAACTTTGGCCGCGCCGCTGGTCACCACCCTGATCTTTC
TGGCGATCTTCGCGTTGTCGGTTGGGCCGCAGACGGCGCAGGGCGGCTTGGGATTCATGGAATTCCTGGCGCCCGGACTG
ATCATGATGGCGATGGTTCAGAACGCCTTCGCCAATACCTCAAGCTCGCTGATCATCGCCAAGGTCCAGGGCAATATCGT
CGATGTGCTGATGCCGCCGCTCAACGCCACCGAACTAACCCTGGCCTATGCCCTGGGCGGCGTGACCCGGGGGGTGATGG
TCGGGATCTTCGTGGCCCTGGGCATGATGGCCTTCGTCACCCTGCATATCCATAGCGTTTTCTTTATCGTCTATCACGCC
TTCGCCGCCTCGCTGATGCTGTCGCTTCTGGGGATGATCGCCGGCATCTGGGCCGATAAATTCGACCATATGGCGTCGGT
GACCAATTTCATCGTCACCCCGCTGTCCTTCCTGTCGGGCACCTTCTATACCATCGACCGCCTGCCCGAGAGCCTGCGCT
TCCTTGCCCATCTCAACCCCTTCTTCTACATGATCGACGGCTTCCGCTTTGGCTTCATCGGCCATGATCAGGCGATGCCG
ATCACCGGGCTGGTGGTGGTGGGCGGGTTCAATGTGGTGCTGGCGGCGGTGTGCTGGCAGATGTTCCGCACCGGCTACAA
ATTGAAGGCCTGA

Upstream 100 bases:

>100_bases
AATGGAAGGGTCGCGATCGGCGCGATGGCGCCAGGGGCCGGTTTTCAGCCCGGCCGGCGGTCCCGCCAAATCCAAGCCGC
AATAAGAAGGAACGATCCCC

Downstream 100 bases:

>100_bases
GCCTCGGTCGCGACCGGGCGATGGGTGGCGAGCGGATTTCCTTGCGCCGCGAAATGGTCTAGAAGGGGCGCCACCCAACA
CCGCACAGGCCCAACACCGC

Product: ABC-2 transporter component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MKDASAGFSIPQPRHIGAVNWLGLWELYLKEVRRFLKVYLQTLAAPLVTTLIFLAIFALSVGPQTAQGGLGFMEFLAPGL
IMMAMVQNAFANTSSSLIIAKVQGNIVDVLMPPLNATELTLAYALGGVTRGVMVGIFVALGMMAFVTLHIHSVFFIVYHA
FAASLMLSLLGMIAGIWADKFDHMASVTNFIVTPLSFLSGTFYTIDRLPESLRFLAHLNPFFYMIDGFRFGFIGHDQAMP
ITGLVVVGGFNVVLAAVCWQMFRTGYKLKA

Sequences:

>Translated_270_residues
MKDASAGFSIPQPRHIGAVNWLGLWELYLKEVRRFLKVYLQTLAAPLVTTLIFLAIFALSVGPQTAQGGLGFMEFLAPGL
IMMAMVQNAFANTSSSLIIAKVQGNIVDVLMPPLNATELTLAYALGGVTRGVMVGIFVALGMMAFVTLHIHSVFFIVYHA
FAASLMLSLLGMIAGIWADKFDHMASVTNFIVTPLSFLSGTFYTIDRLPESLRFLAHLNPFFYMIDGFRFGFIGHDQAMP
ITGLVVVGGFNVVLAAVCWQMFRTGYKLKA
>Mature_270_residues
MKDASAGFSIPQPRHIGAVNWLGLWELYLKEVRRFLKVYLQTLAAPLVTTLIFLAIFALSVGPQTAQGGLGFMEFLAPGL
IMMAMVQNAFANTSSSLIIAKVQGNIVDVLMPPLNATELTLAYALGGVTRGVMVGIFVALGMMAFVTLHIHSVFFIVYHA
FAASLMLSLLGMIAGIWADKFDHMASVTNFIVTPLSFLSGTFYTIDRLPESLRFLAHLNPFFYMIDGFRFGFIGHDQAMP
ITGLVVVGGFNVVLAAVCWQMFRTGYKLKA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=251, Percent_Identity=36.2549800796813, Blast_Score=178, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 29529; Mature: 29529

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDASAGFSIPQPRHIGAVNWLGLWELYLKEVRRFLKVYLQTLAAPLVTTLIFLAIFALS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGPQTAQGGLGFMEFLAPGLIMMAMVQNAFANTSSSLIIAKVQGNIVDVLMPPLNATELT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCHHHHH
LAYALGGVTRGVMVGIFVALGMMAFVTLHIHSVFFIVYHAFAASLMLSLLGMIAGIWADK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDHMASVTNFIVTPLSFLSGTFYTIDRLPESLRFLAHLNPFFYMIDGFRFGFIGHDQAMP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEEECCCCCCC
ITGLVVVGGFNVVLAAVCWQMFRTGYKLKA
HHHEEEECHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKDASAGFSIPQPRHIGAVNWLGLWELYLKEVRRFLKVYLQTLAAPLVTTLIFLAIFALS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGPQTAQGGLGFMEFLAPGLIMMAMVQNAFANTSSSLIIAKVQGNIVDVLMPPLNATELT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCHHHHH
LAYALGGVTRGVMVGIFVALGMMAFVTLHIHSVFFIVYHAFAASLMLSLLGMIAGIWADK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDHMASVTNFIVTPLSFLSGTFYTIDRLPESLRFLAHLNPFFYMIDGFRFGFIGHDQAMP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEEECCCCCCC
ITGLVVVGGFNVVLAAVCWQMFRTGYKLKA
HHHEEEECHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]