| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is recX [H]
Identifier: 83591978
GI number: 83591978
Start: 761139
End: 761735
Strand: Reverse
Name: recX [H]
Synonym: Rru_A0639
Alternate gene names: 83591978
Gene position: 761735-761139 (Counterclockwise)
Preceding gene: 83591987
Following gene: 83591977
Centisome position: 17.5
GC content: 70.02
Gene sequence:
>597_bases TTGGCTACAGACTATTCGCAAGGCCGTCCCGTCGCCAAACCGGTCACTCCGGCCCGTCTCGAACGCATCGCCCTGTTCTA TCTGGAGCGTTTTCCCGCCAGCACGGAAGGTCTACGCCGGGTGCTGATGCGCCGGGTCGAGCGCTCGGTCCGCGCCCATG ACACCGATCGCGCGCAAGCCGCCACCTGGGTCGAGGCGGTGCTGACCCGCCTCCAGGCCTCGGGATTGCTTGATGACCGG GTTTTCGCCGAGGGCAAGGCCCGGGCCCTGTTCCGTCGCGGCGATCCGCCCGGGCTGATCCGCCGCGCCCTGACCGCCCG GGGAGTCGGCACTGAGGCCATCGACGCCGCCCTGGCCGAAGTCCTTGAACACAGCGAGGACCCCGAACACGAGGCGGCCC TGGCCTATTGCCGGCGCCGGCGCCTGGGCCCCTTCCGCCTTGATCCGGCCAGCCGCCCGGCCAACCACCGCAAGGATTTG GCCGCCCTCGCCCGTCACGGCTTCTCGCGCGCCGTCGCCCTGCGCGTCCTCGACCTGGACGATGACGGCGCCGGCGGCGA GGGAGGCTTAACGATTACTCCATCTTTTTGGGCGTAG
Upstream 100 bases:
>100_bases GGACCGCCGGCCGGGCTGAAAACCGGCCCCTGGCGCCATCGCGCCGATCGCGACCCTTCCATTAGGGGGCGCGGCGGCGA AAAGCAAGGGAGACACCTTT
Downstream 100 bases:
>100_bases CCTGGACGGGACCGGGGATGCGACACGATCCACCCCTCCCCCCCTTTTCGGCAAATGGAAACAGGGCGTCAGCATGACCG ATGACCTATCCAGAACCATT
Product: regulatory protein RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MATDYSQGRPVAKPVTPARLERIALFYLERFPASTEGLRRVLMRRVERSVRAHDTDRAQAATWVEAVLTRLQASGLLDDR VFAEGKARALFRRGDPPGLIRRALTARGVGTEAIDAALAEVLEHSEDPEHEAALAYCRRRRLGPFRLDPASRPANHRKDL AALARHGFSRAVALRVLDLDDDGAGGEGGLTITPSFWA
Sequences:
>Translated_198_residues MATDYSQGRPVAKPVTPARLERIALFYLERFPASTEGLRRVLMRRVERSVRAHDTDRAQAATWVEAVLTRLQASGLLDDR VFAEGKARALFRRGDPPGLIRRALTARGVGTEAIDAALAEVLEHSEDPEHEAALAYCRRRRLGPFRLDPASRPANHRKDL AALARHGFSRAVALRVLDLDDDGAGGEGGLTITPSFWA >Mature_197_residues ATDYSQGRPVAKPVTPARLERIALFYLERFPASTEGLRRVLMRRVERSVRAHDTDRAQAATWVEAVLTRLQASGLLDDRV FAEGKARALFRRGDPPGLIRRALTARGVGTEAIDAALAEVLEHSEDPEHEAALAYCRRRRLGPFRLDPASRPANHRKDLA ALARHGFSRAVALRVLDLDDDGAGGEGGLTITPSFWA
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 21815; Mature: 21684
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATDYSQGRPVAKPVTPARLERIALFYLERFPASTEGLRRVLMRRVERSVRAHDTDRAQA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH ATWVEAVLTRLQASGLLDDRVFAEGKARALFRRGDPPGLIRRALTARGVGTEAIDAALAE HHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHH VLEHSEDPEHEAALAYCRRRRLGPFRLDPASRPANHRKDLAALARHGFSRAVALRVLDLD HHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHEEEEECC DDGAGGEGGLTITPSFWA CCCCCCCCCEEECCCCCC >Mature Secondary Structure ATDYSQGRPVAKPVTPARLERIALFYLERFPASTEGLRRVLMRRVERSVRAHDTDRAQA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH ATWVEAVLTRLQASGLLDDRVFAEGKARALFRRGDPPGLIRRALTARGVGTEAIDAALAE HHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHH VLEHSEDPEHEAALAYCRRRRLGPFRLDPASRPANHRKDLAALARHGFSRAVALRVLDLD HHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHEEEEECC DDGAGGEGGLTITPSFWA CCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11844780 [H]