| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591977
Identifier: 83591977
GI number: 83591977
Start: 759149
End: 761065
Strand: Reverse
Name: 83591977
Synonym: Rru_A0638
Alternate gene names: NA
Gene position: 761065-759149 (Counterclockwise)
Preceding gene: 83591978
Following gene: 83591976
Centisome position: 17.48
GC content: 71.47
Gene sequence:
>1917_bases ATGACCGATGACCTATCCAGAACCATTATACAGCTCGCGGGAACGGTGCGCCTGGGTGGATCGGCCATCGAGCGCAATAT CTTGTCGAGCATCCATTCCGCCAGCCAGAAGACCGGGGTCAGTTTCGCCTTCATGCTGGCCAAGGCCCGGCGTGAAAGCA ACTTCCAGGCCGATGCCAGCAATGCGTCAAGCTCGGCCCAGGGCCTGTACCAGTTCACCCATCAAACCTGGCTGGAGCAG GTCAAGCTCCACGGCGCCGACTATGGCCTAGGCGATCTGGCGGCGCATATCATCCGCACGCCAAGCGGCCGCTATGACGT GGACAGCCCCGAGGTGCGCAAGCAGATCCTAGCCCTTCGCCACGATCCCGACACCTCGGCGGCGATGGCGGCGGAATACG CCAGCGACAACCGCCGCCTGCTGGCGGGGGCCCTGGGGCGGCCGGTGACCGATACCGATCTCTATTTGTCGCATTTCTTC GGACCCGGCGGCGCCATCGAGTTCCTGCGGGCGATGGACAGCCAGCCCAATGCGACCGGGGCCGAGGTGCTGCCCAAGGC GGCGCGGACCAATCCCGACACCTTCTATGCCGCCGATGGCCGGGCCCGGCCGTTAACGGAAATCTATGCGATCGTCGGTC ACGGCATCGACAGCTCGATGCGGCGCTTCGCCGGGGCGGCGACGGCGGCGGCGATGAGCGGCAAGGTTCCGCTGGCCCCC GAGGCCAAGCCCGAGGGATTCCAGGTCGCGACCCTCGCCGAAGACATGGCCGGCGAGACCGCCACCGCCTCGGCGGTTCT CGGCGCCCCCCTTCCCCTCGAGACCAAACCGGCGTCCCCGGCGGCCGAGGATATCGGGCGGACGCGCCAAATCGCCGAGG CCACTCCGCCAAGGCCGATGGTCTTCAAGCCACTGGCCGAGGATATGAGCCGCCAGCCCGTCGCGCCGACGCCACCGACG CCGCCGGCCGAGATCCTGGTCGCCGAGGCGACGGTTCCTTCGCCCGCGCCGCCCGCCGCGCCGCCCGCCGCGCCGGTCGG GTCGGCCTATCGGGTTTCCGCCGCCGCCCGTTCCGCCGCCCTCGCCCGTGCCCAGGCGGCTCAAAGCGATCGCACGGTCG CCGGAGCCCGCAGCGATCAGGTGACCCCGGCCGCCGAGCGGTTGGTCGCGAGCACGACCGTCGAGCGGCTGGTCGCGAGC ACGACCGTCGACCGGTCGGTCGCCGCCAGCCGGGGCACTCCGGCGCCCGGAACGACCCTGATGGCCAGCGCCTTTCCCAG CGAGGAGGACCGCGCCCTGGCGACGCGGGTTCTGGTGGCGACCGAGCGCGCCGGCTTGCGCCGCGAGATGGCCACCGCCG ACATGGCCCATAGCGCCGCCCGGGTTTTCGCCGCCCTGGCCGCCGCCGACCTGCCGCCGGGATCGGCGACCCCGATCAGC GACTCCCTGGGCGAGGACGCCCTCGCCCATCAGGCCGCCCCCTCGGGCAGCCTGCCCCATCCCGATATGCTGGCCGATCT GATGCTCGCCGACGCCGCGGACAAACCCGACGACGCGCCCCTCGTCACCGCCGAGGCCACGACCCAGGCCCGCGAGACCC TTCCCGATGAAAGCTTGCCCGGCATCGACGCGACCAAGCCGCTGCCCGCCGTCCCGCCCCTGGGCACCACCACCTATTCG GTGCTGGCGGTGGTGGAAAGCTTCGATCCCACCCGTCACCTGACCGAGATCAGCGGCCAGATGCCCGGTCTGACCACGGC GCCCCACGTTATCCCGGTCCGGACCACCCCCGCCCCGGAAGCGACCGGCCGGGCGACCACGGCCGCCCTCGCCCCGCCGC CCGCCGCCCCCGGCCAGACCACCCTGGCCGCCTCCGAAGGACCGATTCTGCGCTGGCTGCGCACCATGACCGGCTAA
Upstream 100 bases:
>100_bases ACGATTACTCCATCTTTTTGGGCGTAGCCTGGACGGGACCGGGGATGCGACACGATCCACCCCTCCCCCCCTTTTCGGCA AATGGAAACAGGGCGTCAGC
Downstream 100 bases:
>100_bases CTCCGAAAAGGTGGCGATCGGCGGACCATCCCACCATCAAAACGTCCCAATCCGCCGTCAGGATTGCCCTTCACCCTACG TCTTTCCCATCACGTCCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Lytic Transglycosylase; Transglycosylase Domain-Containing Protein; Transglycosylase SLT Domain Protein; Lytic Transglycosylase PleA
Number of amino acids: Translated: 638; Mature: 637
Protein sequence:
>638_residues MTDDLSRTIIQLAGTVRLGGSAIERNILSSIHSASQKTGVSFAFMLAKARRESNFQADASNASSSAQGLYQFTHQTWLEQ VKLHGADYGLGDLAAHIIRTPSGRYDVDSPEVRKQILALRHDPDTSAAMAAEYASDNRRLLAGALGRPVTDTDLYLSHFF GPGGAIEFLRAMDSQPNATGAEVLPKAARTNPDTFYAADGRARPLTEIYAIVGHGIDSSMRRFAGAATAAAMSGKVPLAP EAKPEGFQVATLAEDMAGETATASAVLGAPLPLETKPASPAAEDIGRTRQIAEATPPRPMVFKPLAEDMSRQPVAPTPPT PPAEILVAEATVPSPAPPAAPPAAPVGSAYRVSAAARSAALARAQAAQSDRTVAGARSDQVTPAAERLVASTTVERLVAS TTVDRSVAASRGTPAPGTTLMASAFPSEEDRALATRVLVATERAGLRREMATADMAHSAARVFAALAAADLPPGSATPIS DSLGEDALAHQAAPSGSLPHPDMLADLMLADAADKPDDAPLVTAEATTQARETLPDESLPGIDATKPLPAVPPLGTTTYS VLAVVESFDPTRHLTEISGQMPGLTTAPHVIPVRTTPAPEATGRATTAALAPPPAAPGQTTLAASEGPILRWLRTMTG
Sequences:
>Translated_638_residues MTDDLSRTIIQLAGTVRLGGSAIERNILSSIHSASQKTGVSFAFMLAKARRESNFQADASNASSSAQGLYQFTHQTWLEQ VKLHGADYGLGDLAAHIIRTPSGRYDVDSPEVRKQILALRHDPDTSAAMAAEYASDNRRLLAGALGRPVTDTDLYLSHFF GPGGAIEFLRAMDSQPNATGAEVLPKAARTNPDTFYAADGRARPLTEIYAIVGHGIDSSMRRFAGAATAAAMSGKVPLAP EAKPEGFQVATLAEDMAGETATASAVLGAPLPLETKPASPAAEDIGRTRQIAEATPPRPMVFKPLAEDMSRQPVAPTPPT PPAEILVAEATVPSPAPPAAPPAAPVGSAYRVSAAARSAALARAQAAQSDRTVAGARSDQVTPAAERLVASTTVERLVAS TTVDRSVAASRGTPAPGTTLMASAFPSEEDRALATRVLVATERAGLRREMATADMAHSAARVFAALAAADLPPGSATPIS DSLGEDALAHQAAPSGSLPHPDMLADLMLADAADKPDDAPLVTAEATTQARETLPDESLPGIDATKPLPAVPPLGTTTYS VLAVVESFDPTRHLTEISGQMPGLTTAPHVIPVRTTPAPEATGRATTAALAPPPAAPGQTTLAASEGPILRWLRTMTG >Mature_637_residues TDDLSRTIIQLAGTVRLGGSAIERNILSSIHSASQKTGVSFAFMLAKARRESNFQADASNASSSAQGLYQFTHQTWLEQV KLHGADYGLGDLAAHIIRTPSGRYDVDSPEVRKQILALRHDPDTSAAMAAEYASDNRRLLAGALGRPVTDTDLYLSHFFG PGGAIEFLRAMDSQPNATGAEVLPKAARTNPDTFYAADGRARPLTEIYAIVGHGIDSSMRRFAGAATAAAMSGKVPLAPE AKPEGFQVATLAEDMAGETATASAVLGAPLPLETKPASPAAEDIGRTRQIAEATPPRPMVFKPLAEDMSRQPVAPTPPTP PAEILVAEATVPSPAPPAAPPAAPVGSAYRVSAAARSAALARAQAAQSDRTVAGARSDQVTPAAERLVASTTVERLVAST TVDRSVAASRGTPAPGTTLMASAFPSEEDRALATRVLVATERAGLRREMATADMAHSAARVFAALAAADLPPGSATPISD SLGEDALAHQAAPSGSLPHPDMLADLMLADAADKPDDAPLVTAEATTQARETLPDESLPGIDATKPLPAVPPLGTTTYSV LAVVESFDPTRHLTEISGQMPGLTTAPHVIPVRTTPAPEATGRATTAALAPPPAAPGQTTLAASEGPILRWLRTMTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65932; Mature: 65800
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDLSRTIIQLAGTVRLGGSAIERNILSSIHSASQKTGVSFAFMLAKARRESNFQADAS CCCHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC NASSSAQGLYQFTHQTWLEQVKLHGADYGLGDLAAHIIRTPSGRYDVDSPEVRKQILALR CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH HDPDTSAAMAAEYASDNRRLLAGALGRPVTDTDLYLSHFFGPGGAIEFLRAMDSQPNATG CCCCCHHHHHHHHHCCCCEEEHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCH AEVLPKAARTNPDTFYAADGRARPLTEIYAIVGHGIDSSMRRFAGAATAAAMSGKVPLAP HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC EAKPEGFQVATLAEDMAGETATASAVLGAPLPLETKPASPAAEDIGRTRQIAEATPPRPM CCCCCCEEEEHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCE VFKPLAEDMSRQPVAPTPPTPPAEILVAEATVPSPAPPAAPPAAPVGSAYRVSAAARSAA EEHHHHHHHCCCCCCCCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LARAQAAQSDRTVAGARSDQVTPAAERLVASTTVERLVASTTVDRSVAASRGTPAPGTTL HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE MASAFPSEEDRALATRVLVATERAGLRREMATADMAHSAARVFAALAAADLPPGSATPIS EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DSLGEDALAHQAAPSGSLPHPDMLADLMLADAADKPDDAPLVTAEATTQARETLPDESLP HHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHCCCCCCCC GIDATKPLPAVPPLGTTTYSVLAVVESFDPTRHLTEISGQMPGLTTAPHVIPVRTTPAPE CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCC ATGRATTAALAPPPAAPGQTTLAASEGPILRWLRTMTG CCCCCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHCC >Mature Secondary Structure TDDLSRTIIQLAGTVRLGGSAIERNILSSIHSASQKTGVSFAFMLAKARRESNFQADAS CCHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC NASSSAQGLYQFTHQTWLEQVKLHGADYGLGDLAAHIIRTPSGRYDVDSPEVRKQILALR CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH HDPDTSAAMAAEYASDNRRLLAGALGRPVTDTDLYLSHFFGPGGAIEFLRAMDSQPNATG CCCCCHHHHHHHHHCCCCEEEHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCH AEVLPKAARTNPDTFYAADGRARPLTEIYAIVGHGIDSSMRRFAGAATAAAMSGKVPLAP HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC EAKPEGFQVATLAEDMAGETATASAVLGAPLPLETKPASPAAEDIGRTRQIAEATPPRPM CCCCCCEEEEHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCE VFKPLAEDMSRQPVAPTPPTPPAEILVAEATVPSPAPPAAPPAAPVGSAYRVSAAARSAA EEHHHHHHHCCCCCCCCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LARAQAAQSDRTVAGARSDQVTPAAERLVASTTVERLVASTTVDRSVAASRGTPAPGTTL HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE MASAFPSEEDRALATRVLVATERAGLRREMATADMAHSAARVFAALAAADLPPGSATPIS EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DSLGEDALAHQAAPSGSLPHPDMLADLMLADAADKPDDAPLVTAEATTQARETLPDESLP HHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHCCCCCCCC GIDATKPLPAVPPLGTTTYSVLAVVESFDPTRHLTEISGQMPGLTTAPHVIPVRTTPAPE CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCC ATGRATTAALAPPPAAPGQTTLAASEGPILRWLRTMTG CCCCCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA