| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591973
Identifier: 83591973
GI number: 83591973
Start: 754155
End: 755969
Strand: Reverse
Name: 83591973
Synonym: Rru_A0634
Alternate gene names: NA
Gene position: 755969-754155 (Counterclockwise)
Preceding gene: 83591974
Following gene: 83591972
Centisome position: 17.37
GC content: 66.39
Gene sequence:
>1815_bases ATGGGAACCTTCGATTTCACCATCTCGCCCTTCGATCTTCTCGCCCCCGCCGAGCGCGACAAACTGCAAGGCGGCGCCGA TATCGCCTATTTCACCGCCGGCGAGCGCCTGACCGGACCGGACCGGCCGGGGGATGCGCTTTTCGTGGTGATGAAGGGGC TGGTCGCCGAACGCGAGGGTGATGACCTGCTGACCGTGCATGGCGCGGGCGATTGCGTCGGCGCCCTGGCCCTGATCCAC GGCACGCCAGCGCTGATCTGCGAGGCCCAGGAGGAAACCATCGCCCATGTCATCCCGCGCCAGTTGGTTTTGGATCTCTG CCGGAGCAACGCCGCCTTTGAGCGCTTCTTCGCCACCTCGCTTGGCGATCGTCTGGCCAGCCACGCCCAAACCCGGCATC TGCGCGGGGTCGCCGGGTTCATGGTGGCCAAGGTTGGCGAGGCCTATCTCCACCCGCCGATTTTCGTGTCCGGCACGCTG GGCCTGCGCGACGCCGCCTTGCTGATGAAGCGGCATCGGGCGACCAGCCTGCTGGTCACCGGCGCCGACGGCCGGGTGGG GGTGCTGTCGGGATCGGACCTGCGGGAATGGGCGATCATCCGCGAGCAACCCCTGAGCACCCCGGTCGAGGCCTGCGCCA CCTTTGACACCGTCTTTGTCGATGTCGATGACTTCCTGTTCAATGCCCAGGTGCTGATGACCCGCCACGGCATCCGCCGC TTGCCGGTGCGCCGCGACGGCGCGGTGATCGGCGTGCTCGAAATGATCGATCTGCTGGGCTATATGTCCAGCCACGCCCA TCTGGTGGCGCTGCGCATCGACCGCGCCGACACCCTGGACGATCTGGCCCTCGCCGCCCAGGCCCTCGATCCGCTGATCC AGGGGATGGGCGGATCGGGGGTGCGCCTGCGCGACGTGGCGCGCATGGTTTCGGATCTGTCGCGCAAACTCCAGCGCAAG CTGTTCTCCCTGATCGCCGATCCCGAAATCGCCCAAAGCTGCTGTCTGGTGGTCATGGGATCGGAGGGGCGGGGCGAACA ACTGGCCAAGACCGACCAGGACAACGCCCTGATCATCAAGGATGGCATCGATCCCGAAAGCTTGCGCGGGCTGTGCAACC GGTTCACCGAGGCGATGCTGACCTTTGGCTATCCGCCGTGTCCCGGCGGCATGATGGTGTCCAATCCGGCCTGGGCGAAA AGCGAAAGCGCCCTGCGCGACGATGTCTATGGCTGGATCACCAGCCCCAGCGAGATCGGTTTTCTCAATCTGGCCGCCTT CATCGATGCCGAGGCGGTGGCCGGCGATGGCGCCATGCTCGCCCGCCTCAAAACCCTGCTCTTTGCCCGCCTGCGCGGCA ACAGCGCCTTCCTCAGCCTGTTCGCCCGGCCGATCCTCGCCTTCGACACCCCGCTTGGCTTCTTCCATCAGTTGCTGATC GACCATGGATCGGCCGGCGGCGGCCTTGATGTCAAAAAGGGCGGCATCTTCCCGATCGTTCACGGGGTGCGGGCCCTGGC CCTGGAACACGCCATCACCGAGACCAGCACCTTCGACCGCATCGAAGCCCTGCGCGGCCTTGGCGCGCTCGACGACGGCG TCGCCACCGATCTGGTCGAAGCCCTGCAGGCGCTGATGGCCCTGCGGCTCGAGGCCCGCCTTGGCCGCTCGCCCCAGGAC GGAGCGGTGGCCGACACCCTGATCCGCGCCGGCAGCCTGACCCGCTCCCAGCATACGGCGCTGCGTGACGCCCTGCTGAT CGTCAAACGCTTCAAGGCCCTGCTGACCCACCATTTCCATCTTGAGTCGTTTTAA
Upstream 100 bases:
>100_bases ATCCAACGATACCTGCTGTTTCAGCCCCCCGACGCCAGGACGCGCCGGGGGGTTTTCTTCAAGAGCGGCCGGCGCCGCGA CCCGCCGAGGGGAACACACC
Downstream 100 bases:
>100_bases GGGACGCCGCCATGCTCAGCCGATTGCGCCGCGCCCTCGCCCGCCGCCGTCTCAAGGACCCTGCCTATGATTTCCTCTTC CACCCCGCCCCCGAGGGCGA
Product: cyclic nucleotide-binding domain-containing protein
Products: NA
Alternate protein names: Signal-Transduction Protein; Nucleotidyltransferase; Signal Transduction Protein; Signal Transduction Protein With CBS Domains; Signal-Transduction Protein With CBS Domains; Nucleotidyltransferase Family; CBS Domain Protein; Signal Protein; Inosine-5-Monophosphate Dehydrogenase; CBS Signal-Transduction Protein; Cyclic-Nucleotide Signal Transduction Protein; Multidomain-Containing Protein; Nucleotidyltransferase Domain Family Protein; Cyclic Nucleotide-Regulated Nucleotidyltransferase; Nucleotidyltransferases
Number of amino acids: Translated: 604; Mature: 603
Protein sequence:
>604_residues MGTFDFTISPFDLLAPAERDKLQGGADIAYFTAGERLTGPDRPGDALFVVMKGLVAEREGDDLLTVHGAGDCVGALALIH GTPALICEAQEETIAHVIPRQLVLDLCRSNAAFERFFATSLGDRLASHAQTRHLRGVAGFMVAKVGEAYLHPPIFVSGTL GLRDAALLMKRHRATSLLVTGADGRVGVLSGSDLREWAIIREQPLSTPVEACATFDTVFVDVDDFLFNAQVLMTRHGIRR LPVRRDGAVIGVLEMIDLLGYMSSHAHLVALRIDRADTLDDLALAAQALDPLIQGMGGSGVRLRDVARMVSDLSRKLQRK LFSLIADPEIAQSCCLVVMGSEGRGEQLAKTDQDNALIIKDGIDPESLRGLCNRFTEAMLTFGYPPCPGGMMVSNPAWAK SESALRDDVYGWITSPSEIGFLNLAAFIDAEAVAGDGAMLARLKTLLFARLRGNSAFLSLFARPILAFDTPLGFFHQLLI DHGSAGGGLDVKKGGIFPIVHGVRALALEHAITETSTFDRIEALRGLGALDDGVATDLVEALQALMALRLEARLGRSPQD GAVADTLIRAGSLTRSQHTALRDALLIVKRFKALLTHHFHLESF
Sequences:
>Translated_604_residues MGTFDFTISPFDLLAPAERDKLQGGADIAYFTAGERLTGPDRPGDALFVVMKGLVAEREGDDLLTVHGAGDCVGALALIH GTPALICEAQEETIAHVIPRQLVLDLCRSNAAFERFFATSLGDRLASHAQTRHLRGVAGFMVAKVGEAYLHPPIFVSGTL GLRDAALLMKRHRATSLLVTGADGRVGVLSGSDLREWAIIREQPLSTPVEACATFDTVFVDVDDFLFNAQVLMTRHGIRR LPVRRDGAVIGVLEMIDLLGYMSSHAHLVALRIDRADTLDDLALAAQALDPLIQGMGGSGVRLRDVARMVSDLSRKLQRK LFSLIADPEIAQSCCLVVMGSEGRGEQLAKTDQDNALIIKDGIDPESLRGLCNRFTEAMLTFGYPPCPGGMMVSNPAWAK SESALRDDVYGWITSPSEIGFLNLAAFIDAEAVAGDGAMLARLKTLLFARLRGNSAFLSLFARPILAFDTPLGFFHQLLI DHGSAGGGLDVKKGGIFPIVHGVRALALEHAITETSTFDRIEALRGLGALDDGVATDLVEALQALMALRLEARLGRSPQD GAVADTLIRAGSLTRSQHTALRDALLIVKRFKALLTHHFHLESF >Mature_603_residues GTFDFTISPFDLLAPAERDKLQGGADIAYFTAGERLTGPDRPGDALFVVMKGLVAEREGDDLLTVHGAGDCVGALALIHG TPALICEAQEETIAHVIPRQLVLDLCRSNAAFERFFATSLGDRLASHAQTRHLRGVAGFMVAKVGEAYLHPPIFVSGTLG LRDAALLMKRHRATSLLVTGADGRVGVLSGSDLREWAIIREQPLSTPVEACATFDTVFVDVDDFLFNAQVLMTRHGIRRL PVRRDGAVIGVLEMIDLLGYMSSHAHLVALRIDRADTLDDLALAAQALDPLIQGMGGSGVRLRDVARMVSDLSRKLQRKL FSLIADPEIAQSCCLVVMGSEGRGEQLAKTDQDNALIIKDGIDPESLRGLCNRFTEAMLTFGYPPCPGGMMVSNPAWAKS ESALRDDVYGWITSPSEIGFLNLAAFIDAEAVAGDGAMLARLKTLLFARLRGNSAFLSLFARPILAFDTPLGFFHQLLID HGSAGGGLDVKKGGIFPIVHGVRALALEHAITETSTFDRIEALRGLGALDDGVATDLVEALQALMALRLEARLGRSPQDG AVADTLIRAGSLTRSQHTALRDALLIVKRFKALLTHHFHLESF
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65038; Mature: 64907
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTFDFTISPFDLLAPAERDKLQGGADIAYFTAGERLTGPDRPGDALFVVMKGLVAEREG CCCEEEECCCHHHHCCCCHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCC DDLLTVHGAGDCVGALALIHGTPALICEAQEETIAHVIPRQLVLDLCRSNAAFERFFATS CCEEEEECCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LGDRLASHAQTRHLRGVAGFMVAKVGEAYLHPPIFVSGTLGLRDAALLMKRHRATSLLVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCEEEEE GADGRVGVLSGSDLREWAIIREQPLSTPVEACATFDTVFVDVDDFLFNAQVLMTRHGIRR CCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHEEEEHHHHHHHHHHHHHHHCHHC LPVRRDGAVIGVLEMIDLLGYMSSHAHLVALRIDRADTLDDLALAAQALDPLIQGMGGSG CCCCCCCCEEHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCC VRLRDVARMVSDLSRKLQRKLFSLIADPEIAQSCCLVVMGSEGRGEQLAKTDQDNALIIK CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCCCCHHHCCCCCCEEEEE DGIDPESLRGLCNRFTEAMLTFGYPPCPGGMMVSNPAWAKSESALRDDVYGWITSPSEIG CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHEEECCCCCCC FLNLAAFIDAEAVAGDGAMLARLKTLLFARLRGNSAFLSLFARPILAFDTPLGFFHQLLI HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHH DHGSAGGGLDVKKGGIFPIVHGVRALALEHAITETSTFDRIEALRGLGALDDGVATDLVE HCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHH ALQALMALRLEARLGRSPQDGAVADTLIRAGSLTRSQHTALRDALLIVKRFKALLTHHFH HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC LESF CCCC >Mature Secondary Structure GTFDFTISPFDLLAPAERDKLQGGADIAYFTAGERLTGPDRPGDALFVVMKGLVAEREG CCEEEECCCHHHHCCCCHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCC DDLLTVHGAGDCVGALALIHGTPALICEAQEETIAHVIPRQLVLDLCRSNAAFERFFATS CCEEEEECCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LGDRLASHAQTRHLRGVAGFMVAKVGEAYLHPPIFVSGTLGLRDAALLMKRHRATSLLVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCEEEEE GADGRVGVLSGSDLREWAIIREQPLSTPVEACATFDTVFVDVDDFLFNAQVLMTRHGIRR CCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHEEEEHHHHHHHHHHHHHHHCHHC LPVRRDGAVIGVLEMIDLLGYMSSHAHLVALRIDRADTLDDLALAAQALDPLIQGMGGSG CCCCCCCCEEHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCC VRLRDVARMVSDLSRKLQRKLFSLIADPEIAQSCCLVVMGSEGRGEQLAKTDQDNALIIK CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCCCCHHHCCCCCCEEEEE DGIDPESLRGLCNRFTEAMLTFGYPPCPGGMMVSNPAWAKSESALRDDVYGWITSPSEIG CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHEEECCCCCCC FLNLAAFIDAEAVAGDGAMLARLKTLLFARLRGNSAFLSLFARPILAFDTPLGFFHQLLI HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHH DHGSAGGGLDVKKGGIFPIVHGVRALALEHAITETSTFDRIEALRGLGALDDGVATDLVE HCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHH ALQALMALRLEARLGRSPQDGAVADTLIRAGSLTRSQHTALRDALLIVKRFKALLTHHFH HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC LESF CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA