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The map label for this gene is crtJ [H]

Identifier: 83591965

GI number: 83591965

Start: 744088

End: 745506

Strand: Direct

Name: crtJ [H]

Synonym: Rru_A0626

Alternate gene names: 83591965

Gene position: 744088-745506 (Clockwise)

Preceding gene: 83591964

Following gene: 83591966

Centisome position: 17.09

GC content: 65.54

Gene sequence:

>1419_bases
GTGAAACAGTTGCGCGACCCGGAAATCGTCCTTGAAGGTCTCGATCCCGAGACTGCGGTAACCCTTGTCACAACGGCGAC
CGATGTCACCCTGGTGATCGACCAGGAGGGCGTCATTCGGGATATCGCGCTGGGCGGTGATGGCAGTCTGCCGGTTCGGC
GCAAGGATTGGCTTGGCCGGCCTTGGGCCGAAACGGTCAGCGCGGAAAGCCGGCCCAAGGTCGAGGCCATGCTGCGCAAG
CCCGATGCCGTCGATCCGACGAAATGGCGGCAGGTCATGCACCTGACCGAAACCGGCGTCGAGTTTCCGGTGCTCTATGC
CACCGTGCGTCCGGGCGGGCATGGACAGATCGTCGCCCTTGGCCGCGACATGCGCTCGGTCGCCACCTTGCAGCAGCGTC
TGATCAACGCCCAGCATTCGCTCGAGCGCCATTATGCCCGCCTGCGCCACATGGAGACCCGCTATCGGCTGCTGTTCAAG
CTGACGACCGAGGCGGTTTTGTTCATCGATGGCGCCAGCCGCCGGGTGGTCGAGGCCAATCCCGCCGCCCTGTCGCTGTT
TGGCGAGACCGCCCGCCATATCGTTGGCCGGGCCTTCCCCTTTGGCTTCTCCCAGCCCAGCACGCAGGAAATCGAAACCC
TGCTGGCCGGGGTGCGGACCATTGGCACCGGCGATCCGGTGGTCGCCACCCTGGCCGAGAGCAGCCGGGCGGTGCTGGTT
TCCGCCGCCCTGTTCCGTCAGGAGCGGGCGACCCAGTTCCTGGTGCGGCTGACCCCCCAGGCCGGGGATCGCGAAACCAA
CGGCGTGCCGCCGGCGAAGTTCATGGTGCTCGACGCCGTCGAGGCGATGCCCGATGGTTTCGTCGTCACCGACCTCGACG
GACGCATCCTGACGGCCAACGCCAGTTTCCTCGATCTGGCCCAATTGGCCACCCAGGAACAGGCGCGTGGCCAGTTTCTC
GGGCGTTTCCTCGGGCGGGCCGGCATGGAGTTCAACAGCCTGCTGGTCAATCTGCGCGACATGGATCTGGTCACCCTGAT
GAACACCACCTTGCAGGGGGAATACGGATCGGTGGCCGATGTGGAGATTTCGGCGGTTTCGGCGCCGCTGGCCGAGCAGC
CCTGCCTGGGCTTCGTCATCCGCGATGTCAGCCAGCGCCACGACCCCGATCAGAAGGGCGGCGGCGATTTCACCCGCTCG
GTCGACCATCTGGCCGATCTGGTGGGCCGGGTGCCGCTGAAGGATATCATCCGCGACACCAACGACATCATCGAGCGCCT
GTGCATTCAGGCCGCCTTGGAACTGACCGGCGACAACCGGGCCTCGGCCGCCGAAATGCTGGGCTTGAGCCGGCAAAGCC
TTTACGTCAAGCTGCGCCGTCACGGCATCGGCGATCTTGATGGTGATCGCGAGGAGTGA

Upstream 100 bases:

>100_bases
CCCTTACCACCTCCACCGGTGAAAACACGCCGACGCGACGGTTGCCGAGCGCTTTTCGACGCGCGGTCCATCGCCGGCCT
TACTCCTTAGAACTGATATT

Downstream 100 bases:

>100_bases
ATCCGAGGGGGATGGCCCGCGCGCCTCATCCCTAAGTGTCAATTATAATTGACGATCTTTTCTGTCAAACCTATGGTCAA
GCCATGCAACGGACCGCAGT

Product: Fis family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MKQLRDPEIVLEGLDPETAVTLVTTATDVTLVIDQEGVIRDIALGGDGSLPVRRKDWLGRPWAETVSAESRPKVEAMLRK
PDAVDPTKWRQVMHLTETGVEFPVLYATVRPGGHGQIVALGRDMRSVATLQQRLINAQHSLERHYARLRHMETRYRLLFK
LTTEAVLFIDGASRRVVEANPAALSLFGETARHIVGRAFPFGFSQPSTQEIETLLAGVRTIGTGDPVVATLAESSRAVLV
SAALFRQERATQFLVRLTPQAGDRETNGVPPAKFMVLDAVEAMPDGFVVTDLDGRILTANASFLDLAQLATQEQARGQFL
GRFLGRAGMEFNSLLVNLRDMDLVTLMNTTLQGEYGSVADVEISAVSAPLAEQPCLGFVIRDVSQRHDPDQKGGGDFTRS
VDHLADLVGRVPLKDIIRDTNDIIERLCIQAALELTGDNRASAAEMLGLSRQSLYVKLRRHGIGDLDGDREE

Sequences:

>Translated_472_residues
MKQLRDPEIVLEGLDPETAVTLVTTATDVTLVIDQEGVIRDIALGGDGSLPVRRKDWLGRPWAETVSAESRPKVEAMLRK
PDAVDPTKWRQVMHLTETGVEFPVLYATVRPGGHGQIVALGRDMRSVATLQQRLINAQHSLERHYARLRHMETRYRLLFK
LTTEAVLFIDGASRRVVEANPAALSLFGETARHIVGRAFPFGFSQPSTQEIETLLAGVRTIGTGDPVVATLAESSRAVLV
SAALFRQERATQFLVRLTPQAGDRETNGVPPAKFMVLDAVEAMPDGFVVTDLDGRILTANASFLDLAQLATQEQARGQFL
GRFLGRAGMEFNSLLVNLRDMDLVTLMNTTLQGEYGSVADVEISAVSAPLAEQPCLGFVIRDVSQRHDPDQKGGGDFTRS
VDHLADLVGRVPLKDIIRDTNDIIERLCIQAALELTGDNRASAAEMLGLSRQSLYVKLRRHGIGDLDGDREE
>Mature_472_residues
MKQLRDPEIVLEGLDPETAVTLVTTATDVTLVIDQEGVIRDIALGGDGSLPVRRKDWLGRPWAETVSAESRPKVEAMLRK
PDAVDPTKWRQVMHLTETGVEFPVLYATVRPGGHGQIVALGRDMRSVATLQQRLINAQHSLERHYARLRHMETRYRLLFK
LTTEAVLFIDGASRRVVEANPAALSLFGETARHIVGRAFPFGFSQPSTQEIETLLAGVRTIGTGDPVVATLAESSRAVLV
SAALFRQERATQFLVRLTPQAGDRETNGVPPAKFMVLDAVEAMPDGFVVTDLDGRILTANASFLDLAQLATQEQARGQFL
GRFLGRAGMEFNSLLVNLRDMDLVTLMNTTLQGEYGSVADVEISAVSAPLAEQPCLGFVIRDVSQRHDPDQKGGGDFTRS
VDHLADLVGRVPLKDIIRDTNDIIERLCIQAALELTGDNRASAAEMLGLSRQSLYVKLRRHGIGDLDGDREE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR000014
- InterPro:   IPR011785 [H]

Pfam domain/function: PF02954 HTH_8 [H]

EC number: NA

Molecular weight: Translated: 51789; Mature: 51789

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLRDPEIVLEGLDPETAVTLVTTATDVTLVIDQEGVIRDIALGGDGSLPVRRKDWLGR
CCCCCCCHHEEECCCCCCEEEEEEECCEEEEEEECCCCEEEEEECCCCCCCCCHHHCCCC
PWAETVSAESRPKVEAMLRKPDAVDPTKWRQVMHLTETGVEFPVLYATVRPGGHGQIVAL
CHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEE
GRDMRSVATLQQRLINAQHSLERHYARLRHMETRYRLLFKLTTEAVLFIDGASRRVVEAN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCEEEECC
PAALSLFGETARHIVGRAFPFGFSQPSTQEIETLLAGVRTIGTGDPVVATLAESSRAVLV
CHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHH
SAALFRQERATQFLVRLTPQAGDRETNGVPPAKFMVLDAVEAMPDGFVVTDLDGRILTAN
HHHHHHHHHHHEEHEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEECC
ASFLDLAQLATQEQARGQFLGRFLGRAGMEFNSLLVNLRDMDLVTLMNTTLQGEYGSVAD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCHHHHHHHHHCCCCCCCEEE
VEISAVSAPLAEQPCLGFVIRDVSQRHDPDQKGGGDFTRSVDHLADLVGRVPLKDIIRDT
EEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCH
NDIIERLCIQAALELTGDNRASAAEMLGLSRQSLYVKLRRHGIGDLDGDREE
HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKQLRDPEIVLEGLDPETAVTLVTTATDVTLVIDQEGVIRDIALGGDGSLPVRRKDWLGR
CCCCCCCHHEEECCCCCCEEEEEEECCEEEEEEECCCCEEEEEECCCCCCCCCHHHCCCC
PWAETVSAESRPKVEAMLRKPDAVDPTKWRQVMHLTETGVEFPVLYATVRPGGHGQIVAL
CHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEE
GRDMRSVATLQQRLINAQHSLERHYARLRHMETRYRLLFKLTTEAVLFIDGASRRVVEAN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCEEEECC
PAALSLFGETARHIVGRAFPFGFSQPSTQEIETLLAGVRTIGTGDPVVATLAESSRAVLV
CHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHH
SAALFRQERATQFLVRLTPQAGDRETNGVPPAKFMVLDAVEAMPDGFVVTDLDGRILTAN
HHHHHHHHHHHEEHEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEECC
ASFLDLAQLATQEQARGQFLGRFLGRAGMEFNSLLVNLRDMDLVTLMNTTLQGEYGSVAD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCHHHHHHHHHCCCCCCCEEE
VEISAVSAPLAEQPCLGFVIRDVSQRHDPDQKGGGDFTRSVDHLADLVGRVPLKDIIRDT
EEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCH
NDIIERLCIQAALELTGDNRASAAEMLGLSRQSLYVKLRRHGIGDLDGDREE
HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA