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The map label for this gene is mcpA [H]

Identifier: 83591907

GI number: 83591907

Start: 674130

End: 676118

Strand: Reverse

Name: mcpA [H]

Synonym: Rru_A0568

Alternate gene names: 83591907

Gene position: 676118-674130 (Counterclockwise)

Preceding gene: 83591908

Following gene: 83591905

Centisome position: 15.53

GC content: 65.71

Gene sequence:

>1989_bases
ATGCTCAAGAACATTTCGATCAAGGTTCGTCTATACGCCGGTTTTTTTCTCGTCCTGGCCCTGATGGGGGGCGTCGGACT
GGTGTCTTATTCAATCTTCACCAGTTCGAACGACAAATTCGACGAGTTCTCCGAAGCATCGGAAGTGGCGCTCTCGGCCC
TTCAATTGAACCGCTTGGTTCAATCCTTCGACACCGACGTATCGAAATATCTCGATACGGCCTCGTCCGAGGCCGCGGCG
CGCTTGCACCAGGATCAGATCACCGTCCAGCAAGCCATCTCGGCCTTTGGCGCCCTCGTTGCCGGCACGCCCCAGCAGGA
GGCGGCCGAACGCATCGCCGAGGCGTATCGCAAACATGAAGACGCCCTGAAGCCGGCGATCGGACTGGTCGGCCAGCGCG
TCGATCTAATCTCGACCTCGCTGCTGCCCGCCGCCGAAGGTCTGGTGGAGTGGGCCGTCGATGTCCGCGACAAGGCCTTC
GAGGCCGGCGACGCCCCCACCGCCCAACATGCGTCCAAGGTCATCGAGAACATGTTGCGCGCCCGGGTGGCGGCCGACGG
CTATCTGTCGGACGGCTCGGAAGAGCAGTTCAACGCCATCTGGGAAGCGCTGTTCGCCGTCACCGAAAACCTTGATGGCA
TCCCCACCGCCGCCCAGGTCCAGGACCTTTATGGGCAGTACGAGGAGGCGCTGAATACCCTTTCGGGGATTCTGGGCGAA
ATCACCACGATGGAAACCGCCCTGCGCGACGCCGGGGCGGCGATCACCCGCGAGGGCGAGAACGTCAAGGACGCGGCGCT
GGCCCGCCAGCAGATCATCCGCGACGCCACCCGCAGCCAGCTTGGCAACGCCAGTTCGCTGGTCGTCTGGTCCAATCTGG
TGATCTTGCTGCTTGGTCTGGCCCTGGCCGGCTTTATCGGCCGCGGCATCAGCAAGCCGCTGGGCGCAATGACCGCCGCC
CTCAAGAAGCTTTCCGAGGGGGATAGCGAGACCACCATCCCCGGCCTTGGCCGGGGCGACGAATTGGGCGCCATGGCCCA
TGCCGCCCAGGTGTTCAAGGAATACAACCACAAGATGGAGGCCCTGCGCCGCGATCAGGTCGAGGCGCAGAAACAGGCCG
AGGCCGACCGCCATAGCGCCATCCGCAAGCTGGCCGACGACCTGGAAAACACCGTCTCGGGCGTCATCGGCGTCATCGGC
GCCTCGGCCGGCCAGATGGAAGCCTCGGCCCGCTCGATGTCGGTCACCGCCGAGGATACGGCGCGACGGGCCGGTGACGT
GTCGACCATCACCGATTCCGCCACCCACGATGTCGAGGAGGTCGCCGCCAGCGCCGAGGAGCTCAACGCCTCGATCAGCG
AGATCAGCCGACAGGTCCACCATTCCTCGACGATTTCGCGCGATGCCGTCGAGCGAGCGTCGAAGGCCAGCCATCGGGTC
TCCGACCTCAAGGACGCCGCCGAGCGCATCGGCGAGGTGGTGGCCCTGATCACCGATATCGCCGATCAGACCAACCTTCT
GGCGCTCAACGCCACCATCGAAGCCGCCCGCGCCGGCGATGCCGGCAAGGGCTTCGCCGTGGTCGCCAATGAGGTCAAAA
GCCTTGCCAACCAGACCTCGCGGGCGACCGACGAGATCGGCAAGCAGATCGGCGCCGTCCAGCTCGCCACCAACGAAGCG
GTGGCGGCGATTTCGGGGATCGTCACGGTGATCGGCGAAATGGATCAGGTCTCGGCCGCCGTCGCCGCCGCCATCGAGGA
ACAGGACGCCGCGACCCGGACCATCGCCCAAAGCACCCAGCGCGCCGCGTCGGGCACCCAGCAGGCCAGCTCGACCATGG
GCAATGTCACCCAGGCCGCCGCCAATACGGGCACCGCGGCGACGGAAGTGCTGGCCGCCGCCGGCGAGCTGACTCGTCAG
GCCAGCGAACTGCGCACCCAGGTCGCCCGCTTCCTCGCCCATATCCGCAAGGGCGGCGAATCGGCGTAA

Upstream 100 bases:

>100_bases
CTCAGGTCGTGAGAAAGGCCTTTATCCGAAAGACTGTAGCGCCGGCTTCCTACGCTCCCCCATAACAAAGACCGCCCCGG
GACAGACGTCGGAAACGCGA

Downstream 100 bases:

>100_bases
GCCACCCGCGCCAACACCCTTCAAGGGGACGCTCACGCGCGTCCCCTTGGAACTATCCCGCTCTTTGAGGGGGGAGGCTC
AGCCCCCCCTTCCCTCAGGC

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 662; Mature: 662

Protein sequence:

>662_residues
MLKNISIKVRLYAGFFLVLALMGGVGLVSYSIFTSSNDKFDEFSEASEVALSALQLNRLVQSFDTDVSKYLDTASSEAAA
RLHQDQITVQQAISAFGALVAGTPQQEAAERIAEAYRKHEDALKPAIGLVGQRVDLISTSLLPAAEGLVEWAVDVRDKAF
EAGDAPTAQHASKVIENMLRARVAADGYLSDGSEEQFNAIWEALFAVTENLDGIPTAAQVQDLYGQYEEALNTLSGILGE
ITTMETALRDAGAAITREGENVKDAALARQQIIRDATRSQLGNASSLVVWSNLVILLLGLALAGFIGRGISKPLGAMTAA
LKKLSEGDSETTIPGLGRGDELGAMAHAAQVFKEYNHKMEALRRDQVEAQKQAEADRHSAIRKLADDLENTVSGVIGVIG
ASAGQMEASARSMSVTAEDTARRAGDVSTITDSATHDVEEVAASAEELNASISEISRQVHHSSTISRDAVERASKASHRV
SDLKDAAERIGEVVALITDIADQTNLLALNATIEAARAGDAGKGFAVVANEVKSLANQTSRATDEIGKQIGAVQLATNEA
VAAISGIVTVIGEMDQVSAAVAAAIEEQDAATRTIAQSTQRAASGTQQASSTMGNVTQAAANTGTAATEVLAAAGELTRQ
ASELRTQVARFLAHIRKGGESA

Sequences:

>Translated_662_residues
MLKNISIKVRLYAGFFLVLALMGGVGLVSYSIFTSSNDKFDEFSEASEVALSALQLNRLVQSFDTDVSKYLDTASSEAAA
RLHQDQITVQQAISAFGALVAGTPQQEAAERIAEAYRKHEDALKPAIGLVGQRVDLISTSLLPAAEGLVEWAVDVRDKAF
EAGDAPTAQHASKVIENMLRARVAADGYLSDGSEEQFNAIWEALFAVTENLDGIPTAAQVQDLYGQYEEALNTLSGILGE
ITTMETALRDAGAAITREGENVKDAALARQQIIRDATRSQLGNASSLVVWSNLVILLLGLALAGFIGRGISKPLGAMTAA
LKKLSEGDSETTIPGLGRGDELGAMAHAAQVFKEYNHKMEALRRDQVEAQKQAEADRHSAIRKLADDLENTVSGVIGVIG
ASAGQMEASARSMSVTAEDTARRAGDVSTITDSATHDVEEVAASAEELNASISEISRQVHHSSTISRDAVERASKASHRV
SDLKDAAERIGEVVALITDIADQTNLLALNATIEAARAGDAGKGFAVVANEVKSLANQTSRATDEIGKQIGAVQLATNEA
VAAISGIVTVIGEMDQVSAAVAAAIEEQDAATRTIAQSTQRAASGTQQASSTMGNVTQAAANTGTAATEVLAAAGELTRQ
ASELRTQVARFLAHIRKGGESA
>Mature_662_residues
MLKNISIKVRLYAGFFLVLALMGGVGLVSYSIFTSSNDKFDEFSEASEVALSALQLNRLVQSFDTDVSKYLDTASSEAAA
RLHQDQITVQQAISAFGALVAGTPQQEAAERIAEAYRKHEDALKPAIGLVGQRVDLISTSLLPAAEGLVEWAVDVRDKAF
EAGDAPTAQHASKVIENMLRARVAADGYLSDGSEEQFNAIWEALFAVTENLDGIPTAAQVQDLYGQYEEALNTLSGILGE
ITTMETALRDAGAAITREGENVKDAALARQQIIRDATRSQLGNASSLVVWSNLVILLLGLALAGFIGRGISKPLGAMTAA
LKKLSEGDSETTIPGLGRGDELGAMAHAAQVFKEYNHKMEALRRDQVEAQKQAEADRHSAIRKLADDLENTVSGVIGVIG
ASAGQMEASARSMSVTAEDTARRAGDVSTITDSATHDVEEVAASAEELNASISEISRQVHHSSTISRDAVERASKASHRV
SDLKDAAERIGEVVALITDIADQTNLLALNATIEAARAGDAGKGFAVVANEVKSLANQTSRATDEIGKQIGAVQLATNEA
VAAISGIVTVIGEMDQVSAAVAAAIEEQDAATRTIAQSTQRAASGTQQASSTMGNVTQAAANTGTAATEVLAAAGELTRQ
ASELRTQVARFLAHIRKGGESA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein. Note=Localized at the flagellum-bearing pole of the swarmer cell [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=243, Percent_Identity=34.9794238683128, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1788194, Length=241, Percent_Identity=32.3651452282158, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI2367378, Length=244, Percent_Identity=31.1475409836066, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1788195, Length=246, Percent_Identity=30.8943089430894, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1789453, Length=116, Percent_Identity=43.9655172413793, Blast_Score=84, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 69481; Mature: 69481

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNISIKVRLYAGFFLVLALMGGVGLVSYSIFTSSNDKFDEFSEASEVALSALQLNRLV
CCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHH
QSFDTDVSKYLDTASSEAAARLHQDQITVQQAISAFGALVAGTPQQEAAERIAEAYRKHE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
DALKPAIGLVGQRVDLISTSLLPAAEGLVEWAVDVRDKAFEAGDAPTAQHASKVIENMLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ARVAADGYLSDGSEEQFNAIWEALFAVTENLDGIPTAAQVQDLYGQYEEALNTLSGILGE
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ITTMETALRDAGAAITREGENVKDAALARQQIIRDATRSQLGNASSLVVWSNLVILLLGL
HHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ALAGFIGRGISKPLGAMTAALKKLSEGDSETTIPGLGRGDELGAMAHAAQVFKEYNHKME
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ALRRDQVEAQKQAEADRHSAIRKLADDLENTVSGVIGVIGASAGQMEASARSMSVTAEDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHH
ARRAGDVSTITDSATHDVEEVAASAEELNASISEISRQVHHSSTISRDAVERASKASHRV
HHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDLKDAAERIGEVVALITDIADQTNLLALNATIEAARAGDAGKGFAVVANEVKSLANQTS
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
RATDEIGKQIGAVQLATNEAVAAISGIVTVIGEMDQVSAAVAAAIEEQDAATRTIAQSTQ
HHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAASGTQQASSTMGNVTQAAANTGTAATEVLAAAGELTRQASELRTQVARFLAHIRKGGE
HHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SA
CC
>Mature Secondary Structure
MLKNISIKVRLYAGFFLVLALMGGVGLVSYSIFTSSNDKFDEFSEASEVALSALQLNRLV
CCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHH
QSFDTDVSKYLDTASSEAAARLHQDQITVQQAISAFGALVAGTPQQEAAERIAEAYRKHE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
DALKPAIGLVGQRVDLISTSLLPAAEGLVEWAVDVRDKAFEAGDAPTAQHASKVIENMLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ARVAADGYLSDGSEEQFNAIWEALFAVTENLDGIPTAAQVQDLYGQYEEALNTLSGILGE
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ITTMETALRDAGAAITREGENVKDAALARQQIIRDATRSQLGNASSLVVWSNLVILLLGL
HHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ALAGFIGRGISKPLGAMTAALKKLSEGDSETTIPGLGRGDELGAMAHAAQVFKEYNHKME
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ALRRDQVEAQKQAEADRHSAIRKLADDLENTVSGVIGVIGASAGQMEASARSMSVTAEDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHH
ARRAGDVSTITDSATHDVEEVAASAEELNASISEISRQVHHSSTISRDAVERASKASHRV
HHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDLKDAAERIGEVVALITDIADQTNLLALNATIEAARAGDAGKGFAVVANEVKSLANQTS
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
RATDEIGKQIGAVQLATNEAVAAISGIVTVIGEMDQVSAAVAAAIEEQDAATRTIAQSTQ
HHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAASGTQQASSTMGNVTQAAANTGTAATEVLAAAGELTRQASELRTQVARFLAHIRKGGE
HHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1577276; 11259647 [H]