| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is yceG [H]
Identifier: 83591759
GI number: 83591759
Start: 495193
End: 496179
Strand: Direct
Name: yceG [H]
Synonym: Rru_A0419
Alternate gene names: 83591759
Gene position: 495193-496179 (Clockwise)
Preceding gene: 83591758
Following gene: 83591768
Centisome position: 11.38
GC content: 67.78
Gene sequence:
>987_bases ATGCGGGCCATTCTCGGTGTTTTCCTGGTCGCGGTTCTGGCGGCGCTGACCGTTTTTGGCGGTTATCTGTATGTGACCGA TCGCTTCGTCGCTGCGGGCCCGTTGGCTGCGGAGCGCGTGGTGGTGGTGGCCCCGGGCAGCGGGGTGGACGGCATCGCCG CCACCCTGGCCCGCGAGGGCGTGATCAATGATCCCCTGATCTTCAAAATCGGCGTGCGGCTGGCCGAAACGGCCCGCCAG CTCAAGGCCGGCGAATACCGCTTCACCCCGGGCATGAGCGCCGAGCAGGTGATGGGGCTGCTGGTCTCCGGGCAGGTGGT GGTTCACCGCTTCACCGTGGCCGAGGGGCTGACCACCCGCGTCGTCCGCGACATCGTCCTCGCCCAGGAAGACCTGGTCG GCGAGATTTCGCTGGAGCCGGGCGAAGGCGCGCTTCTGCCCGAGACCTATAATTATCTGCGCGGCGATAGCCGCGACGCC GTCGTCAAGCGGATGGGCGCGGCCATGGGCGAGGCCATCGACAGCCTGTGGGAGCATCGCGCCCCCGGACTGCCGGTGAC CACCAAGGCTCAGGCGGTGGTTCTGGCGTCGATCGTCGAGAAGGAAACCGCCGTTCCGGCGGAGCGGGCGCGGGTGGCCG GGGTTTTCATCAACCGGCTGCGCATCGGCATGCCGCTGCAATCCGATCCGACGGTGATCTATGGCCTGTCGGCTGGCACG GGAACCCTAGGCCGCGCCCTGACCCGCAAGGATCTTGAGACCCCCCACGCCTGGAACACCTATGTGATCCCCGGCCTGCC GCCCAGCCCGATCTGCAATCCGGGCCGCGAGTCCCTGGCCGCCGTGCTCAATCCGGCCGATGGCGGGGATCTTTATTTCG TCGCCGATGGCAGCGGCGGGCATGTCTTCGCCGCCAGCCTCGATGCGCATAACCGCAATGTCGCGCGCTGGCGCAAGATC CAGCGCGATCAGGCCAAGCGGGAGTGA
Upstream 100 bases:
>100_bases GCAAGGCGCTGTCGAATTCCTTCGGCTTTGGCGGCACCAATGCCTCGCTGATCTTCGGGGGAGCCCCCTAACCAGGGGCT CCTTCTTTTCAGGTAAGTCC
Downstream 100 bases:
>100_bases CCCCCCGGCCGCCGGCCTCTATTCGGCGGTGGGCGGCAGGCGACGGATACGGTTGGCGTCCATGATCACCAGGACGCGGT CGACCTCGCGCACCAGATCC
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MRAILGVFLVAVLAALTVFGGYLYVTDRFVAAGPLAAERVVVVAPGSGVDGIAATLAREGVINDPLIFKIGVRLAETARQ LKAGEYRFTPGMSAEQVMGLLVSGQVVVHRFTVAEGLTTRVVRDIVLAQEDLVGEISLEPGEGALLPETYNYLRGDSRDA VVKRMGAAMGEAIDSLWEHRAPGLPVTTKAQAVVLASIVEKETAVPAERARVAGVFINRLRIGMPLQSDPTVIYGLSAGT GTLGRALTRKDLETPHAWNTYVIPGLPPSPICNPGRESLAAVLNPADGGDLYFVADGSGGHVFAASLDAHNRNVARWRKI QRDQAKRE
Sequences:
>Translated_328_residues MRAILGVFLVAVLAALTVFGGYLYVTDRFVAAGPLAAERVVVVAPGSGVDGIAATLAREGVINDPLIFKIGVRLAETARQ LKAGEYRFTPGMSAEQVMGLLVSGQVVVHRFTVAEGLTTRVVRDIVLAQEDLVGEISLEPGEGALLPETYNYLRGDSRDA VVKRMGAAMGEAIDSLWEHRAPGLPVTTKAQAVVLASIVEKETAVPAERARVAGVFINRLRIGMPLQSDPTVIYGLSAGT GTLGRALTRKDLETPHAWNTYVIPGLPPSPICNPGRESLAAVLNPADGGDLYFVADGSGGHVFAASLDAHNRNVARWRKI QRDQAKRE >Mature_328_residues MRAILGVFLVAVLAALTVFGGYLYVTDRFVAAGPLAAERVVVVAPGSGVDGIAATLAREGVINDPLIFKIGVRLAETARQ LKAGEYRFTPGMSAEQVMGLLVSGQVVVHRFTVAEGLTTRVVRDIVLAQEDLVGEISLEPGEGALLPETYNYLRGDSRDA VVKRMGAAMGEAIDSLWEHRAPGLPVTTKAQAVVLASIVEKETAVPAERARVAGVFINRLRIGMPLQSDPTVIYGLSAGT GTLGRALTRKDLETPHAWNTYVIPGLPPSPICNPGRESLAAVLNPADGGDLYFVADGSGGHVFAASLDAHNRNVARWRKI QRDQAKRE
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=305, Percent_Identity=40.9836065573771, Blast_Score=219, Evalue=2e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 34882; Mature: 34882
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAILGVFLVAVLAALTVFGGYLYVTDRFVAAGPLAAERVVVVAPGSGVDGIAATLAREG CHHHHHHHHHHHHHHHHHHCCEEEEECCHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCC VINDPLIFKIGVRLAETARQLKAGEYRFTPGMSAEQVMGLLVSGQVVVHRFTVAEGLTTR CCCCCEEEEHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCEEEEEEEHHHHHHHHH VVRDIVLAQEDLVGEISLEPGEGALLPETYNYLRGDSRDAVVKRMGAAMGEAIDSLWEHR HHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC APGLPVTTKAQAVVLASIVEKETAVPAERARVAGVFINRLRIGMPLQSDPTVIYGLSAGT CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC GTLGRALTRKDLETPHAWNTYVIPGLPPSPICNPGRESLAAVLNPADGGDLYFVADGSGG CHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCC HVFAASLDAHNRNVARWRKIQRDQAKRE EEEEEECCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MRAILGVFLVAVLAALTVFGGYLYVTDRFVAAGPLAAERVVVVAPGSGVDGIAATLAREG CHHHHHHHHHHHHHHHHHHCCEEEEECCHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCC VINDPLIFKIGVRLAETARQLKAGEYRFTPGMSAEQVMGLLVSGQVVVHRFTVAEGLTTR CCCCCEEEEHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCEEEEEEEHHHHHHHHH VVRDIVLAQEDLVGEISLEPGEGALLPETYNYLRGDSRDAVVKRMGAAMGEAIDSLWEHR HHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC APGLPVTTKAQAVVLASIVEKETAVPAERARVAGVFINRLRIGMPLQSDPTVIYGLSAGT CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC GTLGRALTRKDLETPHAWNTYVIPGLPPSPICNPGRESLAAVLNPADGGDLYFVADGSGG CHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCC HVFAASLDAHNRNVARWRKIQRDQAKRE EEEEEECCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 1644759; 8631667 [H]