| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591686
Identifier: 83591686
GI number: 83591686
Start: 418329
End: 419060
Strand: Direct
Name: 83591686
Synonym: Rru_A0346
Alternate gene names: NA
Gene position: 418329-419060 (Clockwise)
Preceding gene: 83591685
Following gene: 83591687
Centisome position: 9.61
GC content: 67.08
Gene sequence:
>732_bases ATGACCCCGCTTTATCTGATCAGCCTGCCTTTGGACATGGTGTCCTTTCATCGCTGGGCCGGCCAGCGCGGCATCGGCAC CGATGAAGGGCGCGCCTTGCATCACCTGCTTGGCGAGAGCTTCGGCAAGGGTGTCCTTCAGCCGTTCCGCTTGATGGTGG CGCCCAATGGCGCCACCGGCACGCTTTACGCCTATACCCGCGCCGATAGGACGGCGCTTGTTCAGACGACGCGGGACTTT GGTCTGCCCGACGCCTTGGCCGTTTGCGATCCCGCCCGGCTGGCCGCCAAGGCCATGCCCGAGGACTGGCGCGAGGGACG CCGTCTGGCCTTTGACCTGCGGGCGCGGCCGGTTCGCCGGCTTTTGAAACCGGCCGGGGTTTTCCCCAAGGGGGCGGAAG TGGATGCCTTCCTGCTTGAGGCCCTCCGCCGTTTTCCCGAGGGGCGGCCCGCCGAGGGGGTGGCCGGCGCGCCGATCACG CGCGAAGGGGTCTATTTCCAATGGCTGGCCGAGCGTCTGTCCGGCGCGGCCCGGGTGGAGGAGGTACGGCTGGCCCGCTT CGAGCGCCGCGCCGTTCTGCGTGGCAGTAAATCCATCGAAGGCCCGGATGCGGTCTTCCATGGGGAACTGGTCATCCTTG ACGGGGCGAAATTCGCCGGGCATCTGGCGTCTGGCCTTGGCCGACATACCGCTTACGGCTATGGCATGATGCTTCTGCGT CCGGCGCGATAG
Upstream 100 bases:
>100_bases GCATCCATGACCTGCCCGACCTGCGGAACTGGCGCACAGGCCTGCACGGTGGAACGCGCCCGATCGTTGAAGGCGTCGTC GTGGCGCAAGGGGCCGGCCT
Downstream 100 bases:
>100_bases GGGACGGATCATGCTGAGCGGAAGGCTGGGACTTGAAAAAGCGCGCATTCCCCATGCCGACCGCCATGGGCTGGTCTGGC TTGATCGCGGCCGTCTGGAG
Product: CRISPR-associated Cse3 family protein
Products: NA
Alternate protein names: CRISPR-Associated Cse3 Family Protein; CRISPR-Associated Protein
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTPLYLISLPLDMVSFHRWAGQRGIGTDEGRALHHLLGESFGKGVLQPFRLMVAPNGATGTLYAYTRADRTALVQTTRDF GLPDALAVCDPARLAAKAMPEDWREGRRLAFDLRARPVRRLLKPAGVFPKGAEVDAFLLEALRRFPEGRPAEGVAGAPIT REGVYFQWLAERLSGAARVEEVRLARFERRAVLRGSKSIEGPDAVFHGELVILDGAKFAGHLASGLGRHTAYGYGMMLLR PAR
Sequences:
>Translated_243_residues MTPLYLISLPLDMVSFHRWAGQRGIGTDEGRALHHLLGESFGKGVLQPFRLMVAPNGATGTLYAYTRADRTALVQTTRDF GLPDALAVCDPARLAAKAMPEDWREGRRLAFDLRARPVRRLLKPAGVFPKGAEVDAFLLEALRRFPEGRPAEGVAGAPIT REGVYFQWLAERLSGAARVEEVRLARFERRAVLRGSKSIEGPDAVFHGELVILDGAKFAGHLASGLGRHTAYGYGMMLLR PAR >Mature_242_residues TPLYLISLPLDMVSFHRWAGQRGIGTDEGRALHHLLGESFGKGVLQPFRLMVAPNGATGTLYAYTRADRTALVQTTRDFG LPDALAVCDPARLAAKAMPEDWREGRRLAFDLRARPVRRLLKPAGVFPKGAEVDAFLLEALRRFPEGRPAEGVAGAPITR EGVYFQWLAERLSGAARVEEVRLARFERRAVLRGSKSIEGPDAVFHGELVILDGAKFAGHLASGLGRHTAYGYGMMLLRP AR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26687; Mature: 26556
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLYLISLPLDMVSFHRWAGQRGIGTDEGRALHHLLGESFGKGVLQPFRLMVAPNGATG CCCEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHHEEEEECCCCCCE TLYAYTRADRTALVQTTRDFGLPDALAVCDPARLAAKAMPEDWREGRRLAFDLRARPVRR EEEEEECCCCHHHHHHHHHCCCCCHHHHCCHHHHHHHCCCHHHHCCCEEEEHHHHHHHHH LLKPAGVFPKGAEVDAFLLEALRRFPEGRPAEGVAGAPITREGVYFQWLAERLSGAARVE HHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHH EVRLARFERRAVLRGSKSIEGPDAVFHGELVILDGAKFAGHLASGLGRHTAYGYGMMLLR HHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHHHHHCCEEEEE PAR CCC >Mature Secondary Structure TPLYLISLPLDMVSFHRWAGQRGIGTDEGRALHHLLGESFGKGVLQPFRLMVAPNGATG CCEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHHEEEEECCCCCCE TLYAYTRADRTALVQTTRDFGLPDALAVCDPARLAAKAMPEDWREGRRLAFDLRARPVRR EEEEEECCCCHHHHHHHHHCCCCCHHHHCCHHHHHHHCCCHHHHCCCEEEEHHHHHHHHH LLKPAGVFPKGAEVDAFLLEALRRFPEGRPAEGVAGAPITREGVYFQWLAERLSGAARVE HHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHH EVRLARFERRAVLRGSKSIEGPDAVFHGELVILDGAKFAGHLASGLGRHTAYGYGMMLLR HHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHHHHHCCEEEEE PAR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA