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The map label for this gene is 83591618

Identifier: 83591618

GI number: 83591618

Start: 342868

End: 343305

Strand: Direct

Name: 83591618

Synonym: Rru_A0278

Alternate gene names: NA

Gene position: 342868-343305 (Clockwise)

Preceding gene: 83591617

Following gene: 83591623

Centisome position: 7.88

GC content: 62.33

Gene sequence:

>438_bases
ATGGATACGGTGAGTGTGTTTACCCGCGTTGGCGGGCCGACCAATCGGGCGAGCGAGGCTGATCGCCATGTGGGAAAGCG
GATTCGCGAACGCCGGGTGATGCTGGGGCTGTCCCAGCAGCAGATGGCCGACATGATCGGCGTTACCTATCAGCAGGCGC
ATAAGTACGAACGCGGCATCAACCGGATCTCCGCCGGCCGGCTGTTCGAGATCGCCCAGGTTCTGCATGTTCCGGTGAAC
TATTTCTTCGATGGTCTTGATGACGAAGCCAGCGAAACGCTGTCGCCGCGTCAGCGGATGTGCCTGGAACTCGCGCGCAA
CTTCGCGATGATCCAGAACGAGCGTCACCAGGAGGCCCTCAGCCAGTTGGCCCGCGCGCTTGCCGCCCAGGTCAGCGTCG
TCGAGGTGATCGAGGAATGTCAGGCTCAGCGCGCCTGA

Upstream 100 bases:

>100_bases
AACAGGCGGCGGGGGACGCCATGCCGGCAGGATCCCACCGGCGAACGGGAGCAGGGCGAGCGGGCGATCCCGGATCGTGG
CAGGGGGAAAGCAAGACATT

Downstream 100 bases:

>100_bases
CCTGATAACGGGCACGGCTGTCAGGCCCCTCGGGCCTGACAAACGCCGCCGCTTAATCCCATTCGGCCCGCACCTGCGGG
TCGTCCTCGATGGCCAGACG

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MDTVSVFTRVGGPTNRASEADRHVGKRIRERRVMLGLSQQQMADMIGVTYQQAHKYERGINRISAGRLFEIAQVLHVPVN
YFFDGLDDEASETLSPRQRMCLELARNFAMIQNERHQEALSQLARALAAQVSVVEVIEECQAQRA

Sequences:

>Translated_145_residues
MDTVSVFTRVGGPTNRASEADRHVGKRIRERRVMLGLSQQQMADMIGVTYQQAHKYERGINRISAGRLFEIAQVLHVPVN
YFFDGLDDEASETLSPRQRMCLELARNFAMIQNERHQEALSQLARALAAQVSVVEVIEECQAQRA
>Mature_145_residues
MDTVSVFTRVGGPTNRASEADRHVGKRIRERRVMLGLSQQQMADMIGVTYQQAHKYERGINRISAGRLFEIAQVLHVPVN
YFFDGLDDEASETLSPRQRMCLELARNFAMIQNERHQEALSQLARALAAQVSVVEVIEECQAQRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 16430; Mature: 16430

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTVSVFTRVGGPTNRASEADRHVGKRIRERRVMLGLSQQQMADMIGVTYQQAHKYERGI
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
NRISAGRLFEIAQVLHVPVNYFFDGLDDEASETLSPRQRMCLELARNFAMIQNERHQEAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
SQLARALAAQVSVVEVIEECQAQRA
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDTVSVFTRVGGPTNRASEADRHVGKRIRERRVMLGLSQQQMADMIGVTYQQAHKYERGI
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
NRISAGRLFEIAQVLHVPVNYFFDGLDDEASETLSPRQRMCLELARNFAMIQNERHQEAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
SQLARALAAQVSVVEVIEECQAQRA
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]