| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591536
Identifier: 83591536
GI number: 83591536
Start: 243725
End: 244675
Strand: Direct
Name: 83591536
Synonym: Rru_A0196
Alternate gene names: NA
Gene position: 243725-244675 (Clockwise)
Preceding gene: 83591535
Following gene: 83591537
Centisome position: 5.6
GC content: 67.72
Gene sequence:
>951_bases GTGGCCGGCGATCAGGAACGGAGGCTCGCATCATGGGGGGCGACGCTTCCAAGGCTTCAGGGGCCGGGCGCCGTGCTGGC GGTCGATTTCGACCGTGTGGCCGGGACCCTGCCGCCGGCGTTGCGATCCCTGATCGGCACCGCCCGGGATGGGGTGGCGC TCACGCCGCGGACTGGGGGCCTCGGGCTGGGTCAGGCCCTCGGCCTTGATGTCGGCGGGCCGGACCCCAAGGCCGCGCGC CTGTTTTGGCAAACCATCGATGGCCGGCGGGTTCTCAATCTGCGAAGCGCGCCTCGCGCATCGCACCAAGTCGCGGATGT GCCCCTTCCGGTCATCGCCCCCCTCGCCGGCACCGACTGGACCTTTGCGCTTGCGGGCGAGGTGACCTTTCGTCGGTTGA TCGCCGATGGCTTCAATGCCCTTTCCGATCACCTCAAGCTCGAGGCGGTCCCTCCAGGAGAGGGGGGGCCGGGGGAGGCC GCGATGGACTGGTTTCTGCGTGGCCAGAACCGAATTCTGTTTCAAGGGACGATCCAATGGGGCGACGCCCCGCCGGTCAG CCGACAGCATGAGCAACTGGGGTTTGAACTGCACGGCGACGCGGACGGCCGTTTGGCCGTTCGGCAAACCCATTCGCGCG GCGCCACCCTTCAGATTGACGTTCATCTTTGCCAAAGCTTCGGCCTTGAAAGCGTCGCCGCGGCCGGCGGGGCGGAGCTC AGGCTGAAAGGCTCCGAGCTGCGGGTGTCCGGTGCGGGCATCGCCGAGGAAACGCTGATGGGAATTGTCCGCGAGCTGTT TGACGGCCCGTTCAAGCAGGCGTTGGAAGCCGTTCCGCTGTCGGCGGCGACGGCGCTTCTGGCCCAAAGCCTCCGCCTTA TCGACAAGACGCCGCGGGTGACCGGTGGCGGCCTGTTCGGCCAGATGGTGCTGGTCGGAGAATTCGGCTGA
Upstream 100 bases:
>100_bases GCTTTGGGGTGGGAACCTGACGGGGGACGGACCCCACCCGGGCGCGGGTCGCCCGGGTGGGGCCCAGGCGTTTGGGAACG TTCAGAAAAGGGGGAAGGCC
Downstream 100 bases:
>100_bases CCGTCGGCTTTTTGACCCGCCCTTCCTCGCACGATCAACAAGGACCCTTACCGATGCCGTCGACCGGGGCGACCTTTGAC AGTCTTGTCGGCCAAATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MAGDQERRLASWGATLPRLQGPGAVLAVDFDRVAGTLPPALRSLIGTARDGVALTPRTGGLGLGQALGLDVGGPDPKAAR LFWQTIDGRRVLNLRSAPRASHQVADVPLPVIAPLAGTDWTFALAGEVTFRRLIADGFNALSDHLKLEAVPPGEGGPGEA AMDWFLRGQNRILFQGTIQWGDAPPVSRQHEQLGFELHGDADGRLAVRQTHSRGATLQIDVHLCQSFGLESVAAAGGAEL RLKGSELRVSGAGIAEETLMGIVRELFDGPFKQALEAVPLSAATALLAQSLRLIDKTPRVTGGGLFGQMVLVGEFG
Sequences:
>Translated_316_residues MAGDQERRLASWGATLPRLQGPGAVLAVDFDRVAGTLPPALRSLIGTARDGVALTPRTGGLGLGQALGLDVGGPDPKAAR LFWQTIDGRRVLNLRSAPRASHQVADVPLPVIAPLAGTDWTFALAGEVTFRRLIADGFNALSDHLKLEAVPPGEGGPGEA AMDWFLRGQNRILFQGTIQWGDAPPVSRQHEQLGFELHGDADGRLAVRQTHSRGATLQIDVHLCQSFGLESVAAAGGAEL RLKGSELRVSGAGIAEETLMGIVRELFDGPFKQALEAVPLSAATALLAQSLRLIDKTPRVTGGGLFGQMVLVGEFG >Mature_315_residues AGDQERRLASWGATLPRLQGPGAVLAVDFDRVAGTLPPALRSLIGTARDGVALTPRTGGLGLGQALGLDVGGPDPKAARL FWQTIDGRRVLNLRSAPRASHQVADVPLPVIAPLAGTDWTFALAGEVTFRRLIADGFNALSDHLKLEAVPPGEGGPGEAA MDWFLRGQNRILFQGTIQWGDAPPVSRQHEQLGFELHGDADGRLAVRQTHSRGATLQIDVHLCQSFGLESVAAAGGAELR LKGSELRVSGAGIAEETLMGIVRELFDGPFKQALEAVPLSAATALLAQSLRLIDKTPRVTGGGLFGQMVLVGEFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33230; Mature: 33099
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGDQERRLASWGATLPRLQGPGAVLAVDFDRVAGTLPPALRSLIGTARDGVALTPRTGG CCCCHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHCCCCHHHHHHHHCCCCCEEECCCCCC LGLGQALGLDVGGPDPKAARLFWQTIDGRRVLNLRSAPRASHQVADVPLPVIAPLAGTDW CCCCHHHCCCCCCCCHHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCE TFALAGEVTFRRLIADGFNALSDHLKLEAVPPGEGGPGEAAMDWFLRGQNRILFQGTIQW EEEEECHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEEEEEC GDAPPVSRQHEQLGFELHGDADGRLAVRQTHSRGATLQIDVHLCQSFGLESVAAAGGAEL CCCCCCCCHHHHCCEEEECCCCCEEEEEEECCCCCEEEEEEHHHHHCCHHHHHHCCCCEE RLKGSELRVSGAGIAEETLMGIVRELFDGPFKQALEAVPLSAATALLAQSLRLIDKTPRV EEECCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC TGGGLFGQMVLVGEFG CCCCCEEEEEEEECCC >Mature Secondary Structure AGDQERRLASWGATLPRLQGPGAVLAVDFDRVAGTLPPALRSLIGTARDGVALTPRTGG CCCHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHCCCCHHHHHHHHCCCCCEEECCCCCC LGLGQALGLDVGGPDPKAARLFWQTIDGRRVLNLRSAPRASHQVADVPLPVIAPLAGTDW CCCCHHHCCCCCCCCHHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCE TFALAGEVTFRRLIADGFNALSDHLKLEAVPPGEGGPGEAAMDWFLRGQNRILFQGTIQW EEEEECHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEEEEEC GDAPPVSRQHEQLGFELHGDADGRLAVRQTHSRGATLQIDVHLCQSFGLESVAAAGGAEL CCCCCCCCHHHHCCEEEECCCCCEEEEEEECCCCCEEEEEEHHHHHCCHHHHHHCCCCEE RLKGSELRVSGAGIAEETLMGIVRELFDGPFKQALEAVPLSAATALLAQSLRLIDKTPRV EEECCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC TGGGLFGQMVLVGEFG CCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA