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The map label for this gene is yvdB [H]

Identifier: 83591504

GI number: 83591504

Start: 189941

End: 191668

Strand: Direct

Name: yvdB [H]

Synonym: Rru_A0164

Alternate gene names: 83591504

Gene position: 189941-191668 (Clockwise)

Preceding gene: 83591503

Following gene: 83591527

Centisome position: 4.36

GC content: 67.42

Gene sequence:

>1728_bases
ATGGACAGCCCCCGGATCGCCCCCCGCCCGTCGATCACCCGCCCCCCCGAGGAAGACTCGTTCCTCGCCCTTTTCACCCC
CAAGCTCGTCACCATGCTGCGCGACGGCTATGGGCTGGGCGATCTGCGCGCCGATGCCCTTGCCGGGCTGACGGTGGCGA
TCGTCGCCCTGCCGCTGTCGATGGCCATCGCCATCGCCTCCGGGGCGACTCCCGAACAGGGGCTGTTCACCGCCATCGTC
GGCGGCTTTCTGATCTCCGCCTTGGGCGGCAGCCGCTTCCAGATCGGCGGACCGGCGGGGGCCTTCATCGTTCTGGTCGC
CGCCACCGTCGCCGAGCACGGCTTTGCCGGCATGATCCTCGCCACCTTCGTGGCCGGGCTGATCCTGGTGGCCATGGGGC
TGTTGCGGCTGGGGACCTACGTCAAATTCATCCCCTATCCGGTCACGGTGGGCTTTACCGCCGGCATCGGCGTGGTGATC
TTCACCACCCAGATCAAAGACCTTCTCGGCCTCAGCTTAAGCGGGCCCGAACCGGGCGAGATCTTGCCCAAGCTGATGGC
CCTGGGTTCGGCCCTGCCGTCGATCACCCCGGCGGCCCTGCTGATCTCGATCCCCACCATCGCCTTCATCGTCTTGCAAA
AGCGCTTCCGCCCGGGCTGGCCGGGCATGCTGCTGGCCGTCGCCCTGGGCAGTTTCACCGCCTGGCTATTCAATATGCCA
ATCGAGACGGTGGGCTCGCGCTTTGGCGAGATCCCGCGCACCCTGCCGCTGCCGTCGATGCCGGTCTTCTCCTTTGATCT
TTTGATCGCTGTCCTGCCCGATGCGGCGGCCTTCGCCCTGCTTGGCGCCATCGAGTCGCTGCTCTCGGCCGTGGTCGCCG
ACGGCATGACCGGGCGCCGTCACCGCTCCAATTGCGAATTGGTGGCCCAGGGCATCGCCAATATGGCCTCGGCGCTGTTT
GGCGGCGTCTGCGCCACCGGCACCATCGCCAGAACGGCGACCAATGTGCGGGCCGGGGCGCGCGGGCCGATCGCCGGCAT
GCTCCACGCCCTGTTCCTGCTTGGCTTCCTGGCGGTGGCGGCGCCCTTGGTCAGCTATATCCCGCTGGCCTCGCTGGCGG
CGGTTCTGGCGATCGTCGCCTGGAACATGATCGAGCGCCATGCCTTCGCCGTGCTGCTGCGCACCTCGCGCGGCGATACG
GTGGTGCTGATGGCAACCTTCCTGTTGACCATCTTCCGCGATCTGACCGAGGGGATCGTCGCCGGTTTCCTGATCGGCAC
CTTGCTGTTCCTTAATCGCATGGCCAAGGCCACGGTGGTCGAAGCCGATCAGCCCCTGATCGCCGAGGACCGCGCCGATG
GCGCCTTTGGCCGCTCGGCCTATGACGCCGCCCTGGCCAGCGATCCCCGGGTGGTGGTCTATCGCATCTCCGGGGCGTTC
TTCTTCGGCGCGGCCTCGACCGTGGGCTCGGTGCTCGATCGCATCGCCGATCAGCGCAAGGCCTTCGTCCTTGATTTCGC
CGCCGTCCCCTTCCTCGACTCGACGGCGGCCAATGCCATCGAGGGCGCGGTGCGCAAGGCCCAGCGCCACAAGGTGAAGG
TCTTCTTCACCGGCGCCTCACCCAAGGTCCGCCGAACCCTGCTCGCCCACGACCTGCGTCCGCCGCGCGTCATCTACAAG
CGGACCATCGACGATGCGGTGACGGCCGTGAAAGCCGAACCGATCTGA

Upstream 100 bases:

>100_bases
GCCAGCATACCAGGGGATAAGGGGTCCAGGGTTTCCCCCGCGACGGTGGACATGCCGGCTTTTCGACGAGTCCGCCCGTC
TTTCTTGCGCAAAGGTCGTC

Downstream 100 bases:

>100_bases
GCAGCCGGCGGGCTGGCGGCGGCGGGCGGGACTCCGTTTTTTGGTTCTTCCCGTCTGGGTGTGTTGCGGGGGGTGGTTTG
CGGACTTTGCGGCGATCTAT

Product: sulfate transporter/antisigma-factor antagonist

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 575; Mature: 575

Protein sequence:

>575_residues
MDSPRIAPRPSITRPPEEDSFLALFTPKLVTMLRDGYGLGDLRADALAGLTVAIVALPLSMAIAIASGATPEQGLFTAIV
GGFLISALGGSRFQIGGPAGAFIVLVAATVAEHGFAGMILATFVAGLILVAMGLLRLGTYVKFIPYPVTVGFTAGIGVVI
FTTQIKDLLGLSLSGPEPGEILPKLMALGSALPSITPAALLISIPTIAFIVLQKRFRPGWPGMLLAVALGSFTAWLFNMP
IETVGSRFGEIPRTLPLPSMPVFSFDLLIAVLPDAAAFALLGAIESLLSAVVADGMTGRRHRSNCELVAQGIANMASALF
GGVCATGTIARTATNVRAGARGPIAGMLHALFLLGFLAVAAPLVSYIPLASLAAVLAIVAWNMIERHAFAVLLRTSRGDT
VVLMATFLLTIFRDLTEGIVAGFLIGTLLFLNRMAKATVVEADQPLIAEDRADGAFGRSAYDAALASDPRVVVYRISGAF
FFGAASTVGSVLDRIADQRKAFVLDFAAVPFLDSTAANAIEGAVRKAQRHKVKVFFTGASPKVRRTLLAHDLRPPRVIYK
RTIDDAVTAVKAEPI

Sequences:

>Translated_575_residues
MDSPRIAPRPSITRPPEEDSFLALFTPKLVTMLRDGYGLGDLRADALAGLTVAIVALPLSMAIAIASGATPEQGLFTAIV
GGFLISALGGSRFQIGGPAGAFIVLVAATVAEHGFAGMILATFVAGLILVAMGLLRLGTYVKFIPYPVTVGFTAGIGVVI
FTTQIKDLLGLSLSGPEPGEILPKLMALGSALPSITPAALLISIPTIAFIVLQKRFRPGWPGMLLAVALGSFTAWLFNMP
IETVGSRFGEIPRTLPLPSMPVFSFDLLIAVLPDAAAFALLGAIESLLSAVVADGMTGRRHRSNCELVAQGIANMASALF
GGVCATGTIARTATNVRAGARGPIAGMLHALFLLGFLAVAAPLVSYIPLASLAAVLAIVAWNMIERHAFAVLLRTSRGDT
VVLMATFLLTIFRDLTEGIVAGFLIGTLLFLNRMAKATVVEADQPLIAEDRADGAFGRSAYDAALASDPRVVVYRISGAF
FFGAASTVGSVLDRIADQRKAFVLDFAAVPFLDSTAANAIEGAVRKAQRHKVKVFFTGASPKVRRTLLAHDLRPPRVIYK
RTIDDAVTAVKAEPI
>Mature_575_residues
MDSPRIAPRPSITRPPEEDSFLALFTPKLVTMLRDGYGLGDLRADALAGLTVAIVALPLSMAIAIASGATPEQGLFTAIV
GGFLISALGGSRFQIGGPAGAFIVLVAATVAEHGFAGMILATFVAGLILVAMGLLRLGTYVKFIPYPVTVGFTAGIGVVI
FTTQIKDLLGLSLSGPEPGEILPKLMALGSALPSITPAALLISIPTIAFIVLQKRFRPGWPGMLLAVALGSFTAWLFNMP
IETVGSRFGEIPRTLPLPSMPVFSFDLLIAVLPDAAAFALLGAIESLLSAVVADGMTGRRHRSNCELVAQGIANMASALF
GGVCATGTIARTATNVRAGARGPIAGMLHALFLLGFLAVAAPLVSYIPLASLAAVLAIVAWNMIERHAFAVLLRTSRGDT
VVLMATFLLTIFRDLTEGIVAGFLIGTLLFLNRMAKATVVEADQPLIAEDRADGAFGRSAYDAALASDPRVVVYRISGAF
FFGAASTVGSVLDRIADQRKAFVLDFAAVPFLDSTAANAIEGAVRKAQRHKVKVFFTGASPKVRRTLLAHDLRPPRVIYK
RTIDDAVTAVKAEPI

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI262206105, Length=572, Percent_Identity=27.4475524475524, Blast_Score=151, Evalue=2e-36,
Organism=Homo sapiens, GI262206075, Length=572, Percent_Identity=27.4475524475524, Blast_Score=151, Evalue=2e-36,
Organism=Homo sapiens, GI262206069, Length=572, Percent_Identity=27.4475524475524, Blast_Score=151, Evalue=2e-36,
Organism=Homo sapiens, GI262206063, Length=572, Percent_Identity=27.4475524475524, Blast_Score=151, Evalue=2e-36,
Organism=Homo sapiens, GI45827800, Length=531, Percent_Identity=21.6572504708098, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI39752683, Length=531, Percent_Identity=21.6572504708098, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI94721257, Length=485, Percent_Identity=23.5051546391753, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI94721253, Length=485, Percent_Identity=23.5051546391753, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI94721259, Length=487, Percent_Identity=23.8193018480493, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI94721255, Length=485, Percent_Identity=23.5051546391753, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI20336282, Length=445, Percent_Identity=22.6966292134831, Blast_Score=79, Evalue=2e-14,
Organism=Homo sapiens, GI16306483, Length=445, Percent_Identity=22.6966292134831, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI45827802, Length=431, Percent_Identity=22.969837587007, Blast_Score=78, Evalue=3e-14,
Organism=Homo sapiens, GI16418457, Length=578, Percent_Identity=21.4532871972318, Blast_Score=66, Evalue=8e-11,
Organism=Homo sapiens, GI301601599, Length=578, Percent_Identity=21.4532871972318, Blast_Score=66, Evalue=8e-11,
Organism=Escherichia coli, GI87081859, Length=515, Percent_Identity=37.2815533980583, Blast_Score=281, Evalue=1e-76,
Organism=Caenorhabditis elegans, GI17566848, Length=572, Percent_Identity=24.6503496503496, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17551690, Length=571, Percent_Identity=21.1908931698774, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI86564876, Length=629, Percent_Identity=22.0985691573927, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI86564196, Length=534, Percent_Identity=21.3483146067416, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI86565215, Length=524, Percent_Identity=24.0458015267176, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI193203292, Length=502, Percent_Identity=21.5139442231076, Blast_Score=83, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17562578, Length=445, Percent_Identity=23.5955056179775, Blast_Score=69, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6325260, Length=577, Percent_Identity=22.5303292894281, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24647160, Length=432, Percent_Identity=27.0833333333333, Blast_Score=122, Evalue=9e-28,
Organism=Drosophila melanogaster, GI21355087, Length=432, Percent_Identity=27.0833333333333, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI85815873, Length=427, Percent_Identity=27.8688524590164, Blast_Score=119, Evalue=8e-27,
Organism=Drosophila melanogaster, GI19922482, Length=450, Percent_Identity=24.4444444444444, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24651449, Length=586, Percent_Identity=22.8668941979522, Blast_Score=109, Evalue=6e-24,
Organism=Drosophila melanogaster, GI21358229, Length=577, Percent_Identity=23.3968804159445, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24649801, Length=532, Percent_Identity=22.3684210526316, Blast_Score=98, Evalue=2e-20,
Organism=Drosophila melanogaster, GI21358633, Length=581, Percent_Identity=23.7521514629948, Blast_Score=88, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24666186, Length=377, Percent_Identity=24.1379310344828, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24663084, Length=137, Percent_Identity=37.956204379562, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21357695, Length=137, Percent_Identity=37.956204379562, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 60287; Mature: 60287

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSPRIAPRPSITRPPEEDSFLALFTPKLVTMLRDGYGLGDLRADALAGLTVAIVALPLS
CCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
MAIAIASGATPEQGLFTAIVGGFLISALGGSRFQIGGPAGAFIVLVAATVAEHGFAGMIL
HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCHHHHHH
ATFVAGLILVAMGLLRLGTYVKFIPYPVTVGFTAGIGVVIFTTQIKDLLGLSLSGPEPGE
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEHHHHHHHHCCCCCCCCCHH
ILPKLMALGSALPSITPAALLISIPTIAFIVLQKRFRPGWPGMLLAVALGSFTAWLFNMP
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
IETVGSRFGEIPRTLPLPSMPVFSFDLLIAVLPDAAAFALLGAIESLLSAVVADGMTGRR
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC
HRSNCELVAQGIANMASALFGGVCATGTIARTATNVRAGARGPIAGMLHALFLLGFLAVA
CCCCHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
APLVSYIPLASLAAVLAIVAWNMIERHAFAVLLRTSRGDTVVLMATFLLTIFRDLTEGIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEHHHHHHHHHHHHHHHHHHH
AGFLIGTLLFLNRMAKATVVEADQPLIAEDRADGAFGRSAYDAALASDPRVVVYRISGAF
HHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCE
FFGAASTVGSVLDRIADQRKAFVLDFAAVPFLDSTAANAIEGAVRKAQRHKVKVFFTGAS
EHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCHHHHHHHHHHHHHHHHCEEEEEEECCC
PKVRRTLLAHDLRPPRVIYKRTIDDAVTAVKAEPI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDSPRIAPRPSITRPPEEDSFLALFTPKLVTMLRDGYGLGDLRADALAGLTVAIVALPLS
CCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
MAIAIASGATPEQGLFTAIVGGFLISALGGSRFQIGGPAGAFIVLVAATVAEHGFAGMIL
HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCHHHHHH
ATFVAGLILVAMGLLRLGTYVKFIPYPVTVGFTAGIGVVIFTTQIKDLLGLSLSGPEPGE
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEHHHHHHHHCCCCCCCCCHH
ILPKLMALGSALPSITPAALLISIPTIAFIVLQKRFRPGWPGMLLAVALGSFTAWLFNMP
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
IETVGSRFGEIPRTLPLPSMPVFSFDLLIAVLPDAAAFALLGAIESLLSAVVADGMTGRR
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC
HRSNCELVAQGIANMASALFGGVCATGTIARTATNVRAGARGPIAGMLHALFLLGFLAVA
CCCCHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
APLVSYIPLASLAAVLAIVAWNMIERHAFAVLLRTSRGDTVVLMATFLLTIFRDLTEGIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEHHHHHHHHHHHHHHHHHHH
AGFLIGTLLFLNRMAKATVVEADQPLIAEDRADGAFGRSAYDAALASDPRVVVYRISGAF
HHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCE
FFGAASTVGSVLDRIADQRKAFVLDFAAVPFLDSTAANAIEGAVRKAQRHKVKVFFTGAS
EHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCHHHHHHHHHHHHHHHHCEEEEEEECCC
PKVRRTLLAHDLRPPRVIYKRTIDDAVTAVKAEPI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]