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The map label for this gene is 83591419

Identifier: 83591419

GI number: 83591419

Start: 91210

End: 91707

Strand: Direct

Name: 83591419

Synonym: Rru_A0079

Alternate gene names: NA

Gene position: 91210-91707 (Clockwise)

Preceding gene: 83591418

Following gene: 83591423

Centisome position: 2.1

GC content: 59.64

Gene sequence:

>498_bases
ATGTCCAACCAGCTACAGTATGAAACCGGCGATTTTGTTGTTTATCCCACCCATGGCGTGGGTCAGGTCCTGGACATCGA
GAAACAGGTTATCGGCGGTTACGACCTGGAACTTCTGGTTATCGGCTTCGAGCGCGAACGCATGAAATTGCGGATCCCCA
TGCCCAAGGTGCGCGAATCGGGTCTGCGCCGCCTGTCGACCAAGAAAGTCATGGAATCGGCCCTGGTGACCCTGCGCGGC
AAGGCCCGCGTCAAGCGCACCATGTGGAGCCGCCGCGCCCAGGAATACGAAGCCAAGATCAATTCCGGCGATCCGGTTTC
CATCGCCGAAGTGGTGCGCGATCTTCACCGCAACGCCACCCAGCCCGAGCAGTCCTATTCCGAACGTCAGATCTATGAAC
TGGCGCTGGAGCGTCTGACCTGCGAACTGGCCGCGATCGAGGATATCGACGCCTCGACCGCCACCCAGAAGGTCGAAAAG
CTGCTAAGCGCCGCCTGA

Upstream 100 bases:

>100_bases
TGAAACGCCGGGGAAGTGTATCGGGGCGCTCGGAAATGCGGCAGCGGGCAGTCGGAATGATCGTAGTCGCCGGGTTCAAG
AACGGAGAGAAGTAACAGAT

Downstream 100 bases:

>100_bases
TCGACGGTCGCCTTGATCGTTGTCGCCGGTTTCAACGGAGGTCGTCGTTTCAGAGGGCCTCCGTTGTCTTATGGAGCGAG
GCGATCAGGCTTCCGGCTGC

Product: CarD family transcriptional regulator

Products: NA

Alternate protein names: CarD Family Transcriptional Regulator; Transcriptional Regulator; Transcription Factor CarD; Transcription Factor; Transcriptional Factor Regulator; CarD-Like Transcriptional Regulator; Transcriptional Regulator CarD Family Protein; Transcription Regulator CarD; CarD-Like Transcriptional Regulator Family; CarD-Family Transcriptional Regulator; Transcriptional Regulator Card Family; CarD Transcriptional Regulator-Like Protein; Transcriptional Regulator Protein CarD Family; Transcription Factor Regulator; CarD-Like Transcriptional Regulator Protein; CarD-Like Protein; CarD Transcriptional Regulator; Transcription Factor Protein; Transcriptional Regulator CarD-Like Regulator; Transcriptional Regulator CarD; CarD-Like Transcriptional Regulator Family Protein; Transcriptional Regulator Of CarD Family; Transcriptional Regulator Card Domain Protein

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSNQLQYETGDFVVYPTHGVGQVLDIEKQVIGGYDLELLVIGFERERMKLRIPMPKVRESGLRRLSTKKVMESALVTLRG
KARVKRTMWSRRAQEYEAKINSGDPVSIAEVVRDLHRNATQPEQSYSERQIYELALERLTCELAAIEDIDASTATQKVEK
LLSAA

Sequences:

>Translated_165_residues
MSNQLQYETGDFVVYPTHGVGQVLDIEKQVIGGYDLELLVIGFERERMKLRIPMPKVRESGLRRLSTKKVMESALVTLRG
KARVKRTMWSRRAQEYEAKINSGDPVSIAEVVRDLHRNATQPEQSYSERQIYELALERLTCELAAIEDIDASTATQKVEK
LLSAA
>Mature_164_residues
SNQLQYETGDFVVYPTHGVGQVLDIEKQVIGGYDLELLVIGFERERMKLRIPMPKVRESGLRRLSTKKVMESALVTLRGK
ARVKRTMWSRRAQEYEAKINSGDPVSIAEVVRDLHRNATQPEQSYSERQIYELALERLTCELAAIEDIDASTATQKVEKL
LSAA

Specific function: Unknown

COG id: COG1329

COG function: function code K; Transcriptional regulators, similar to M. xanthus CarD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18753; Mature: 18622

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQLQYETGDFVVYPTHGVGQVLDIEKQVIGGYDLELLVIGFERERMKLRIPMPKVRES
CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCHHHHHH
GLRRLSTKKVMESALVTLRGKARVKRTMWSRRAQEYEAKINSGDPVSIAEVVRDLHRNAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
QPEQSYSERQIYELALERLTCELAAIEDIDASTATQKVEKLLSAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNQLQYETGDFVVYPTHGVGQVLDIEKQVIGGYDLELLVIGFERERMKLRIPMPKVRES
CCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCHHHHHH
GLRRLSTKKVMESALVTLRGKARVKRTMWSRRAQEYEAKINSGDPVSIAEVVRDLHRNAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
QPEQSYSERQIYELALERLTCELAAIEDIDASTATQKVEKLLSAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA