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The map label for this gene is hslR [H]

Identifier: 83591415

GI number: 83591415

Start: 88991

End: 89425

Strand: Direct

Name: hslR [H]

Synonym: Rru_A0075

Alternate gene names: 83591415

Gene position: 88991-89425 (Clockwise)

Preceding gene: 83591414

Following gene: 83591416

Centisome position: 2.04

GC content: 71.49

Gene sequence:

>435_bases
ATGAGCAAGGCCGGCATCGGAGCCGGAGACGGGGCGGGCGGGCTATCGCCAGGGATCGATAGCCCGCTTTCGCAGCGGAT
CGATAAGTGGCTGTGGTACGCCCGCTTCTGCAAAACGCGCGGTCTGGCCCAAACCCTATGCGCCGCCGGCCATGTGAAGC
GCGAGGGGGAGTCGCTGGTCAAGGCGGCCACCCTGGTGCGGCCGGGGGACCGCCTGACCCTGGTCCTTGGCCCGCTGCGC
CGAACGGTGGTGGTGCGCGCGGCCGGGGCGCGGCGGGGGCCGGCCCCCGAAGCCAGAACCCTTTATGACGAGCCCGAGCC
CGCCGAACGTCTGGGCGATCCGACGATGGAAGGGCTGTCGCGACCAAGCGGCGGCGGGCGGCCGACCAAAAAGGATCGCC
GCGCCCTTGATCGCTGGCGGGCCGAGGACGAGTAG

Upstream 100 bases:

>100_bases
GTGGCGCCTCGACCACCGCTTACAGCAGCGGTCCGCGACCGGCGCGCTCGGAGATCAACCCCGATAGTCCCTTTGCCAAG
CTAAGGGAACTGATGGGTCG

Downstream 100 bases:

>100_bases
GCCGCTTTTCGGGCTTGATGCCGGGCGGCGCGGAGCCCAGCTAAGGCAAACCCCAAGCGATCTGAACCAGGGCGCGGCGA
CGATGTGCTTCACCATCAGG

Product: RNA-binding S4

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSKAGIGAGDGAGGLSPGIDSPLSQRIDKWLWYARFCKTRGLAQTLCAAGHVKREGESLVKAATLVRPGDRLTLVLGPLR
RTVVVRAAGARRGPAPEARTLYDEPEPAERLGDPTMEGLSRPSGGGRPTKKDRRALDRWRAEDE

Sequences:

>Translated_144_residues
MSKAGIGAGDGAGGLSPGIDSPLSQRIDKWLWYARFCKTRGLAQTLCAAGHVKREGESLVKAATLVRPGDRLTLVLGPLR
RTVVVRAAGARRGPAPEARTLYDEPEPAERLGDPTMEGLSRPSGGGRPTKKDRRALDRWRAEDE
>Mature_143_residues
SKAGIGAGDGAGGLSPGIDSPLSQRIDKWLWYARFCKTRGLAQTLCAAGHVKREGESLVKAATLVRPGDRLTLVLGPLRR
TVVVRAAGARRGPAPEARTLYDEPEPAERLGDPTMEGLSRPSGGGRPTKKDRRALDRWRAEDE

Specific function: Involved in the recycling of free 50S ribosomal subunits that still carry a nascent chain. Binds RNA more specifically than DNA. Binds with very high affinity to the free 50S ribosomal subunit. Does not bind it when it is part of the 70S ribosome [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=123, Percent_Identity=39.8373983739837, Blast_Score=73, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 15485; Mature: 15354

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKAGIGAGDGAGGLSPGIDSPLSQRIDKWLWYARFCKTRGLAQTLCAAGHVKREGESLV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KAATLVRPGDRLTLVLGPLRRTVVVRAAGARRGPAPEARTLYDEPEPAERLGDPTMEGLS
HHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHC
RPSGGGRPTKKDRRALDRWRAEDE
CCCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SKAGIGAGDGAGGLSPGIDSPLSQRIDKWLWYARFCKTRGLAQTLCAAGHVKREGESLV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KAATLVRPGDRLTLVLGPLRRTVVVRAAGARRGPAPEARTLYDEPEPAERLGDPTMEGLS
HHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHC
RPSGGGRPTKKDRRALDRWRAEDE
CCCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]