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The map label for this gene is gltD [H]

Identifier: 83591358

GI number: 83591358

Start: 19695

End: 21152

Strand: Direct

Name: gltD [H]

Synonym: Rru_A0018

Alternate gene names: 83591358

Gene position: 19695-21152 (Clockwise)

Preceding gene: 83591356

Following gene: 83591359

Centisome position: 0.45

GC content: 68.11

Gene sequence:

>1458_bases
ATGGCCCGCAAGATGCTCCAGTTCACCCGGCTGGACCAGCGCACCCCCGACAAGCGGTCGGCGGGAACGCGCCGCGTCGA
TTTCGACGAGATCTATGGCCGTTTCACCCCCGATGCGGCGGGCGATCAGGCTTCGCGCTGCGAGCAGTGCGGCATTCCCT
TCTGCCAGATCCATTGCCCTTTGCAAAACAACATCCCCGACTGGCTGATGCTGACCGCCGCGGGCCGCCTTGAAGAAGCC
TATGCGCTGTCTTCGGCGACCAATTCGATGCCGGAGATCTGCGGCCGCATCTGTCCCCAGGATCGCCTGTGCGAGGGGTC
TTGCGTGCTCGAGCAGTCGCGCCACGGCGCGGTGACCATCGGCGCGGTGGAGAAATTCATCACCGATACCGCCTGGGAGC
GCGGCTGGGTCAAGCCGATCCTTCCCTTGCGCGAACGCGAGCAGTCGGTGGGCATCATCGGCGGCGGTCCGGCGGGCATG
GCCGCGGCCGAGCAGCTGCGCGCCCAGGGCTATCAGGTCACGCTGTATGACCGCTATGACCGCATCGGCGGTCTGCTGGT
TTATGGCATTCCCGGCTTCAAGCTGGAGAAATCCGTCGTCGAGCGCCGCGTCGATCTGCTGGCGCGCTCGGGGGTGATCT
TCAAGACCAATTTCGAGGTCGGCCGCGACGCCTCCTTGCCGGAATTGCGCAAGACCCACGACGCCGTGCTGATCGCCACC
GGCGTCTACAAGGCGCGCGGGCTGTCGATCCCCGGGGCCGGCTTGCGCGGCGTGACCAAGGCGCTTGATTACCTGATCGC
CTCGAACCGCACCGGCCTGGGCGACCGGGTTCCGGCCTTCGAGGACGGCACCCTTGACGCCAAGGACAAGGCGGTGGTGG
TGATCGGCGGCGGCGATACGGCGATGGACTGTCTGCGCACCGCCATCCGTCAGGGCGCGCGCTCGGTCAAATGTCTTTAT
CGCCGCGACCGGGCCAATATGCCCGGCTCGCAGCGCGAGGTGATCAACGCCGTTGAAGAGGGCGTCGATTTCGTCTGGTT
GACCGCCCCGGAAGCCGTGCTTGGTGACGAGCGGGCGACGGGCGTGCGCGCCCACCGCATGCATCTGGGCGTCGCCGACG
CCACCGGCCGCCAGTCGCCCCAGCCGATCGCCGGTTCCGAATTCACCCTCGAGGCCGATCTGGTGATCGAGGCCCTGGGC
TTCGAGCCCGAGGATCTGCCCGCGGTGTTTGGCGAGCCGCGCTTGCCGATCACCCGCTGGGGCACCATCCAGATCGATCC
GGTCTCGAAAATGAGCGGGCTCGACGGGGTGTTCGCCGCCGGCGACATCGTGCGCGGCGCCTCGCTGGTGGTTTGGGCCG
TCCGCGACGGCCGCGACGCCGCCGAAGGCATCCGCCGCTATCTGGTCGCCAAGGCCGCCGCCGCGCCGGCCAAAGCCGCC
CCCCTGGTCAACGCCTGA

Upstream 100 bases:

>100_bases
GCTTGCCGCCGCGCCCGACCGGCGCCGCCGGCGGCCTTGCCCAAGATGACCCGCCGACAGCCGTTCCTATTCGCCAGATC
GCCACCAGGGAGAGTCGCCG

Downstream 100 bases:

>100_bases
GAGAAACGGGAAGGACCCCGCCGATGACCCAGTCTTCCGAACGCCTTTCCGCGTCGGCTCCCGAATCGGGCGAGGCCTTC
GTCGCCCGCTGGCAGCGCGA

Product: putative oxidoreductase

Products: NA

Alternate protein names: Glutamate synthase subunit beta; GLTS beta chain; NADPH-GOGAT [H]

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MARKMLQFTRLDQRTPDKRSAGTRRVDFDEIYGRFTPDAAGDQASRCEQCGIPFCQIHCPLQNNIPDWLMLTAAGRLEEA
YALSSATNSMPEICGRICPQDRLCEGSCVLEQSRHGAVTIGAVEKFITDTAWERGWVKPILPLREREQSVGIIGGGPAGM
AAAEQLRAQGYQVTLYDRYDRIGGLLVYGIPGFKLEKSVVERRVDLLARSGVIFKTNFEVGRDASLPELRKTHDAVLIAT
GVYKARGLSIPGAGLRGVTKALDYLIASNRTGLGDRVPAFEDGTLDAKDKAVVVIGGGDTAMDCLRTAIRQGARSVKCLY
RRDRANMPGSQREVINAVEEGVDFVWLTAPEAVLGDERATGVRAHRMHLGVADATGRQSPQPIAGSEFTLEADLVIEALG
FEPEDLPAVFGEPRLPITRWGTIQIDPVSKMSGLDGVFAAGDIVRGASLVVWAVRDGRDAAEGIRRYLVAKAAAAPAKAA
PLVNA

Sequences:

>Translated_485_residues
MARKMLQFTRLDQRTPDKRSAGTRRVDFDEIYGRFTPDAAGDQASRCEQCGIPFCQIHCPLQNNIPDWLMLTAAGRLEEA
YALSSATNSMPEICGRICPQDRLCEGSCVLEQSRHGAVTIGAVEKFITDTAWERGWVKPILPLREREQSVGIIGGGPAGM
AAAEQLRAQGYQVTLYDRYDRIGGLLVYGIPGFKLEKSVVERRVDLLARSGVIFKTNFEVGRDASLPELRKTHDAVLIAT
GVYKARGLSIPGAGLRGVTKALDYLIASNRTGLGDRVPAFEDGTLDAKDKAVVVIGGGDTAMDCLRTAIRQGARSVKCLY
RRDRANMPGSQREVINAVEEGVDFVWLTAPEAVLGDERATGVRAHRMHLGVADATGRQSPQPIAGSEFTLEADLVIEALG
FEPEDLPAVFGEPRLPITRWGTIQIDPVSKMSGLDGVFAAGDIVRGASLVVWAVRDGRDAAEGIRRYLVAKAAAAPAKAA
PLVNA
>Mature_484_residues
ARKMLQFTRLDQRTPDKRSAGTRRVDFDEIYGRFTPDAAGDQASRCEQCGIPFCQIHCPLQNNIPDWLMLTAAGRLEEAY
ALSSATNSMPEICGRICPQDRLCEGSCVLEQSRHGAVTIGAVEKFITDTAWERGWVKPILPLREREQSVGIIGGGPAGMA
AAEQLRAQGYQVTLYDRYDRIGGLLVYGIPGFKLEKSVVERRVDLLARSGVIFKTNFEVGRDASLPELRKTHDAVLIATG
VYKARGLSIPGAGLRGVTKALDYLIASNRTGLGDRVPAFEDGTLDAKDKAVVVIGGGDTAMDCLRTAIRQGARSVKCLYR
RDRANMPGSQREVINAVEEGVDFVWLTAPEAVLGDERATGVRAHRMHLGVADATGRQSPQPIAGSEFTLEADLVIEALGF
EPEDLPAVFGEPRLPITRWGTIQIDPVSKMSGLDGVFAAGDIVRGASLVVWAVRDGRDAAEGIRRYLVAKAAAAPAKAAP
LVNA

Specific function: Unknown

COG id: COG0493

COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119943098, Length=498, Percent_Identity=26.5060240963855, Blast_Score=155, Evalue=7e-38,
Organism=Homo sapiens, GI111118983, Length=168, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI111118981, Length=168, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=6e-13,
Organism=Escherichia coli, GI1788811, Length=464, Percent_Identity=45.2586206896552, Blast_Score=389, Evalue=1e-109,
Organism=Escherichia coli, GI1789606, Length=476, Percent_Identity=43.6974789915966, Blast_Score=384, Evalue=1e-108,
Organism=Escherichia coli, GI87082180, Length=464, Percent_Identity=43.75, Blast_Score=365, Evalue=1e-102,
Organism=Escherichia coli, GI1788468, Length=446, Percent_Identity=31.390134529148, Blast_Score=179, Evalue=4e-46,
Organism=Escherichia coli, GI1789243, Length=420, Percent_Identity=31.4285714285714, Blast_Score=142, Evalue=5e-35,
Organism=Caenorhabditis elegans, GI17570289, Length=508, Percent_Identity=36.0236220472441, Blast_Score=261, Evalue=9e-70,
Organism=Caenorhabditis elegans, GI71984108, Length=466, Percent_Identity=28.755364806867, Blast_Score=150, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17543860, Length=174, Percent_Identity=32.183908045977, Blast_Score=77, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6320030, Length=495, Percent_Identity=34.9494949494949, Blast_Score=249, Evalue=6e-67,
Organism=Drosophila melanogaster, GI28574881, Length=495, Percent_Identity=38.1818181818182, Blast_Score=293, Evalue=2e-79,
Organism=Drosophila melanogaster, GI24665539, Length=495, Percent_Identity=38.1818181818182, Blast_Score=293, Evalue=2e-79,
Organism=Drosophila melanogaster, GI24665547, Length=495, Percent_Identity=38.1818181818182, Blast_Score=292, Evalue=3e-79,
Organism=Drosophila melanogaster, GI24665543, Length=495, Percent_Identity=38.1818181818182, Blast_Score=292, Evalue=3e-79,
Organism=Drosophila melanogaster, GI24640763, Length=472, Percent_Identity=28.8135593220339, Blast_Score=149, Evalue=5e-36,
Organism=Drosophila melanogaster, GI18858217, Length=472, Percent_Identity=28.8135593220339, Blast_Score=149, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR012285
- InterPro:   IPR006006
- InterPro:   IPR009051
- InterPro:   IPR016040
- InterPro:   IPR001327 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: =1.4.1.13 [H]

Molecular weight: Translated: 52428; Mature: 52296

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKMLQFTRLDQRTPDKRSAGTRRVDFDEIYGRFTPDAAGDQASRCEQCGIPFCQIHCP
CCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEECC
LQNNIPDWLMLTAAGRLEEAYALSSATNSMPEICGRICPQDRLCEGSCVLEQSRHGAVTI
CCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCEEH
GAVEKFITDTAWERGWVKPILPLREREQSVGIIGGGPAGMAAAEQLRAQGYQVTLYDRYD
HHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEECCCCHHHHHHHHHHHCCCEEEEEECHH
RIGGLLVYGIPGFKLEKSVVERRVDLLARSGVIFKTNFEVGRDASLPELRKTHDAVLIAT
CCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHCCCEEEEEE
GVYKARGLSIPGAGLRGVTKALDYLIASNRTGLGDRVPAFEDGTLDAKDKAVVVIGGGDT
CCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHH
AMDCLRTAIRQGARSVKCLYRRDRANMPGSQREVINAVEEGVDFVWLTAPEAVLGDERAT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHCCCCCC
GVRAHRMHLGVADATGRQSPQPIAGSEFTLEADLVIEALGFEPEDLPAVFGEPRLPITRW
CCEEEEEEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCHHCCCCCCCEEEC
GTIQIDPVSKMSGLDGVFAAGDIVRGASLVVWAVRDGRDAAEGIRRYLVAKAAAAPAKAA
CEEEECCCHHHCCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC
PLVNA
CCCCC
>Mature Secondary Structure 
ARKMLQFTRLDQRTPDKRSAGTRRVDFDEIYGRFTPDAAGDQASRCEQCGIPFCQIHCP
CHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEECC
LQNNIPDWLMLTAAGRLEEAYALSSATNSMPEICGRICPQDRLCEGSCVLEQSRHGAVTI
CCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCEEH
GAVEKFITDTAWERGWVKPILPLREREQSVGIIGGGPAGMAAAEQLRAQGYQVTLYDRYD
HHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEECCCCHHHHHHHHHHHCCCEEEEEECHH
RIGGLLVYGIPGFKLEKSVVERRVDLLARSGVIFKTNFEVGRDASLPELRKTHDAVLIAT
CCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHCCCEEEEEE
GVYKARGLSIPGAGLRGVTKALDYLIASNRTGLGDRVPAFEDGTLDAKDKAVVVIGGGDT
CCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHH
AMDCLRTAIRQGARSVKCLYRRDRANMPGSQREVINAVEEGVDFVWLTAPEAVLGDERAT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHCCCCCC
GVRAHRMHLGVADATGRQSPQPIAGSEFTLEADLVIEALGFEPEDLPAVFGEPRLPITRW
CCEEEEEEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCHHCCCCCCCEEEC
GTIQIDPVSKMSGLDGVFAAGDIVRGASLVVWAVRDGRDAAEGIRRYLVAKAAAAPAKAA
CEEEECCCHHHCCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC
PLVNA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8428988; 2198943 [H]