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The map label for this gene is ybjT [C]

Identifier: 83591356

GI number: 83591356

Start: 17356

End: 18378

Strand: Direct

Name: ybjT [C]

Synonym: Rru_A0016

Alternate gene names: 83591356

Gene position: 17356-18378 (Clockwise)

Preceding gene: 83591346

Following gene: 83591358

Centisome position: 0.4

GC content: 67.35

Gene sequence:

>1023_bases
ATGACTGGCCGCGTCGTTACCGTTTTCGGGGGCTCGGGCTCCATCGGCAGGCAATTGGTCGCCCTGTTGGCCGACCAGGG
GGCGCGGGTGCGCGTCGCCGTGCGCGATACCGAGAAGGCCCATTTCCTCAAGCCCCTCGGCCAACTGGGCCAGATCGCCC
CGATCTCGGCCTCGGTGTCGGATGCCGCTTCGGTCAAGCGCGCCGTCGAAGGCGCCGATCAGGTGGTCAATCTGGTGGGC
ATCCTGGCCGAAAGCGGCCGGCGGACCTTTCAGGCGGTTCATGTCGACGGGGCGGCCACCGTCGCCCGGGCCAGCGCCGA
AGCCGGCGTCGACGCCCTGATCCACATGTCGGCCCTGGGGGCCGATGAGGCCTCGGACGCCAACTATAGCAAAACAAAGG
CTTTGGGCGAAAAGGCCGTGCGCGAGGCCTTTCCCGCCGCCACCATTTTGCGCCCCAGCGTTGTCTTCGGCCCCGACGAC
GGGTTCTTCAACCTGTTCGCCGGTCTCCAGCGGCTTTCGCCGGTGCTGCCCTATTTCACCCGCGACGGCTTCCGGCGCGG
CGGCTCGGGCGTTTGCGGGATCGATCTGGCGGGCAGCGGCGGCCCGAAGTTCCAGCCGGTTTATGTCGGCGATGTCGCCC
GCGCCATGATCGCCATCCTCGATACCCCGGCCCTGCGCGGCAAAACCTATGAACTGGGCGGCCCCCGGGTTTATTCCATG
AAAGAGATCATGGATCTGGTGGTCGCGGTGACCCGCCGGCGCACCCTTGTGGTTCCGCTGCCGTTCTGGGTCGCCCGGCT
GCAGGGGCGTTTGCTTGAAAAGCTGCCCAATCCGCCGCTGACCAGCGATCAGGTGCGGCTGATGGAAGTCGACAACGTGT
GTTCGGGCGCCCTGCCCGGTCTTGGCGATCTTGGCATCGAGCCCGAGGCGGCCGAGGCGATCTTGCCCACCTATCTCAGC
CGTTTCCGCGGGCTTGACCGCCACATGATCCTGCGCGGCGACGGCCGCCCGCCAAAGGTGTGA

Upstream 100 bases:

>100_bases
AGGCTTATGTCAGGTTTCCTCCGCTCCGGTTGTTTGAGCCGGATCGGGGCGGCGTCGCCATCGACGTCGGACGGATCGCA
AGGCGAAGGGAAGGCGCAAG

Downstream 100 bases:

>100_bases
GCGAGGCGCCGGGAACACCGGCCGCTCCATTGCGGCGCCTCCGCTCCGCTTTTGCCTGAGCAGAGCGAATCCCGAGCACT
CCGGACCAAAGTGCGGCGAC

Product: 3-beta-hydroxy-delta(5)-steroid dehydrogenase

Products: NAD+; ubiquinol

Alternate protein names: NADH Dehydrogenase; NADH-Ubiquinone Oxidoreductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family Protein; NADH-Ubiquinone Oxidoreductase Subunit; Oxidoreductase Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Dtdp-Glucose-46-Dehydratase; NADH-Ubiquinone Oxireductase; NADH Dehydrogenase/Oxidoreductase-Like Protein; NADH-Ubiquinone Oxidoreductase Family Protein; NmrA Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family; 3-Beta-Hydroxy-Delta(5)-Steroid Dehydrogenase; NADH Ubiquinone Oxidoreductase; NmrA-Like Family; Nucleoside-Diphosphate-Sugar Epimerases; NADH Dehydrogenase 1 Alpha Subcomplex; Dehydrogenase; NADH Dehydrogenase/NADH Dehydrogenase Protein; Ubiquinone Dependent NADH Dehydrogenase; NADH Dehydrogenase Subunit; Homolog NADH Dehydrogenase; NADH Dehydrogenase-Like Protein; NAD Dependent Epimerase; Nucleoside-Diphosphate Sugar Epimerase; NADH-Ubiquinone Oxidoreductase -Like Protein; NADH-Ubiquinone Oxidoreductase Putativ; NADH-Quinone Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase Protein; LOW QUALITY PROTEIN Oxidoreductase

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MTGRVVTVFGGSGSIGRQLVALLADQGARVRVAVRDTEKAHFLKPLGQLGQIAPISASVSDAASVKRAVEGADQVVNLVG
ILAESGRRTFQAVHVDGAATVARASAEAGVDALIHMSALGADEASDANYSKTKALGEKAVREAFPAATILRPSVVFGPDD
GFFNLFAGLQRLSPVLPYFTRDGFRRGGSGVCGIDLAGSGGPKFQPVYVGDVARAMIAILDTPALRGKTYELGGPRVYSM
KEIMDLVVAVTRRRTLVVPLPFWVARLQGRLLEKLPNPPLTSDQVRLMEVDNVCSGALPGLGDLGIEPEAAEAILPTYLS
RFRGLDRHMILRGDGRPPKV

Sequences:

>Translated_340_residues
MTGRVVTVFGGSGSIGRQLVALLADQGARVRVAVRDTEKAHFLKPLGQLGQIAPISASVSDAASVKRAVEGADQVVNLVG
ILAESGRRTFQAVHVDGAATVARASAEAGVDALIHMSALGADEASDANYSKTKALGEKAVREAFPAATILRPSVVFGPDD
GFFNLFAGLQRLSPVLPYFTRDGFRRGGSGVCGIDLAGSGGPKFQPVYVGDVARAMIAILDTPALRGKTYELGGPRVYSM
KEIMDLVVAVTRRRTLVVPLPFWVARLQGRLLEKLPNPPLTSDQVRLMEVDNVCSGALPGLGDLGIEPEAAEAILPTYLS
RFRGLDRHMILRGDGRPPKV
>Mature_339_residues
TGRVVTVFGGSGSIGRQLVALLADQGARVRVAVRDTEKAHFLKPLGQLGQIAPISASVSDAASVKRAVEGADQVVNLVGI
LAESGRRTFQAVHVDGAATVARASAEAGVDALIHMSALGADEASDANYSKTKALGEKAVREAFPAATILRPSVVFGPDDG
FFNLFAGLQRLSPVLPYFTRDGFRRGGSGVCGIDLAGSGGPKFQPVYVGDVARAMIAILDTPALRGKTYELGGPRVYSMK
EIMDLVVAVTRRRTLVVPLPFWVARLQGRLLEKLPNPPLTSDQVRLMEVDNVCSGALPGLGDLGIEPEAAEAILPTYLSR
FRGLDRHMILRGDGRPPKV

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=327, Percent_Identity=35.1681957186544, Blast_Score=171, Evalue=9e-43,
Organism=Escherichia coli, GI87081793, Length=265, Percent_Identity=24.5283018867925, Blast_Score=73, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17556106, Length=328, Percent_Identity=30.7926829268293, Blast_Score=151, Evalue=4e-37,
Organism=Drosophila melanogaster, GI24667554, Length=342, Percent_Identity=30.7017543859649, Blast_Score=136, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 35976; Mature: 35845

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGRVVTVFGGSGSIGRQLVALLADQGARVRVAVRDTEKAHFLKPLGQLGQIAPISASVS
CCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCHH
DAASVKRAVEGADQVVNLVGILAESGRRTFQAVHVDGAATVARASAEAGVDALIHMSALG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCHHHHHHHHHCC
ADEASDANYSKTKALGEKAVREAFPAATILRPSVVFGPDDGFFNLFAGLQRLSPVLPYFT
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH
RDGFRRGGSGVCGIDLAGSGGPKFQPVYVGDVARAMIAILDTPALRGKTYELGGPRVYSM
HHHHCCCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCEEECCCCEEECH
KEIMDLVVAVTRRRTLVVPLPFWVARLQGRLLEKLPNPPLTSDQVRLMEVDNVCSGALPG
HHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHCCCCCC
LGDLGIEPEAAEAILPTYLSRFRGLDRHMILRGDGRPPKV
CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
TGRVVTVFGGSGSIGRQLVALLADQGARVRVAVRDTEKAHFLKPLGQLGQIAPISASVS
CCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCHH
DAASVKRAVEGADQVVNLVGILAESGRRTFQAVHVDGAATVARASAEAGVDALIHMSALG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCHHHHHHHHHCC
ADEASDANYSKTKALGEKAVREAFPAATILRPSVVFGPDDGFFNLFAGLQRLSPVLPYFT
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH
RDGFRRGGSGVCGIDLAGSGGPKFQPVYVGDVARAMIAILDTPALRGKTYELGGPRVYSM
HHHHCCCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCEEECCCCEEECH
KEIMDLVVAVTRRRTLVVPLPFWVARLQGRLLEKLPNPPLTSDQVRLMEVDNVCSGALPG
HHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHCCCCCC
LGDLGIEPEAAEAILPTYLSRFRGLDRHMILRGDGRPPKV
CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA