| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is npr [H]
Identifier: 83313493
GI number: 83313493
Start: 4797478
End: 4797783
Strand: Reverse
Name: npr [H]
Synonym: amb4394
Alternate gene names: 83313493
Gene position: 4797783-4797478 (Counterclockwise)
Preceding gene: 83313494
Following gene: 83313492
Centisome position: 96.59
GC content: 68.95
Gene sequence:
>306_bases ATGTCGGACGTGATCGGAACCTCGGGCGGGGCCGGCGCGGAGCTGGTCCGCACCGCCACCATCTCCAACCGACGCGGTCT GCACGCCCGGGCCGCCGCCAAGTTCGTCAAGCTGGCCGCCACCTTCGACGCCCAGGTGACCGTCGGTCATCGCGGCACCG AGGTGTCGGGCCTGTCGATCATGGGGCTGATGATGCTGGCTGCGGCGCCCGGCTGCTCCATCGAGCTGAAGGTGACCGGC GCCCAGGCCACCGAAGCCATGGACGCCCTGTTCGATCTCGTCGACCGCAAGTTCGACGAAGACTGA
Upstream 100 bases:
>100_bases GCCATTCCGAGGCCCTGGCCGATGCCGTGGCCAGCGCCCAGGAGGCCGGTCGCAAATACATCAACGTCGCCTCCAAGCTG CTGACTCAGGATCGCAAGTA
Downstream 100 bases:
>100_bases AAGCCCGGTCATGACGGCGAACGGCGGCAGCAAGGCGGTCGGACGAAGCAAGGCGACGGCCCGCGCCGAACTGGTCCGCG ACGGGTTGGGCGTGTCGCGG
Product: phosphotransferase system, HPr-related protein
Products: NA
Alternate protein names: Nitrogen-related HPr [H]
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MSDVIGTSGGAGAELVRTATISNRRGLHARAAAKFVKLAATFDAQVTVGHRGTEVSGLSIMGLMMLAAAPGCSIELKVTG AQATEAMDALFDLVDRKFDED
Sequences:
>Translated_101_residues MSDVIGTSGGAGAELVRTATISNRRGLHARAAAKFVKLAATFDAQVTVGHRGTEVSGLSIMGLMMLAAAPGCSIELKVTG AQATEAMDALFDLVDRKFDED >Mature_100_residues SDVIGTSGGAGAELVRTATISNRRGLHARAAAKFVKLAATFDAQVTVGHRGTEVSGLSIMGLMMLAAAPGCSIELKVTGA QATEAMDALFDLVDRKFDED
Specific function: Component of the phosphoenolpyruvate-dependent nitrogen- metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the p
COG id: COG1925
COG function: function code G; Phosphotransferase system, HPr-related proteins
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPr domain [H]
Homologues:
Organism=Escherichia coli, GI1789599, Length=86, Percent_Identity=41.8604651162791, Blast_Score=67, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001020 - InterPro: IPR005698 - InterPro: IPR000032 - InterPro: IPR002114 [H]
Pfam domain/function: PF00381 PTS-HPr [H]
EC number: NA
Molecular weight: Translated: 10440; Mature: 10309
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS00369 PTS_HPR_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVIGTSGGAGAELVRTATISNRRGLHARAAAKFVKLAATFDAQVTVGHRGTEVSGLSI CCCCCCCCCCCCHHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHH MGLMMLAAAPGCSIELKVTGAQATEAMDALFDLVDRKFDED HHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SDVIGTSGGAGAELVRTATISNRRGLHARAAAKFVKLAATFDAQVTVGHRGTEVSGLSI CCCCCCCCCCCHHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHH MGLMMLAAAPGCSIELKVTGAQATEAMDALFDLVDRKFDED HHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]