| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is ahcY [H]
Identifier: 83313490
GI number: 83313490
Start: 4793749
End: 4795140
Strand: Reverse
Name: ahcY [H]
Synonym: amb4391
Alternate gene names: 83313490
Gene position: 4795140-4793749 (Counterclockwise)
Preceding gene: 83313491
Following gene: 83313489
Centisome position: 96.54
GC content: 64.15
Gene sequence:
>1392_bases ATGACCGATTACGTCGTTGCCGATATCGCCCTGGCCGCTTGGGGCCGCAAGGAGCTGGACATCGCCGAGAGCGAGATGCC CGGCCTGATGGCCACCCGCGAGGAATTCGGCCCGTCGCAGCCGCTGAAGGGCGCCCGCATCGCCGGCTCGCTGCACATGA CCATTCAGACCGGCGTGCTGATCGAGACCCTGAAGGCTCTGGGCGCCGACATCCGCTGGGCGTCGTGCAACATCTTCTCG ACCCAGGACCACGCCGCCGCCGCCATCGCCGCCGCCGGCATCCCGGTGTTCGCCGTCAAGGGCGAGAACCTGGAAGAGTA CTGGGACTACACCCACCGCATCTTCGAATGGGCCGATGGCGGCTGCCCCAACATGATCCTGGACGACGGCGGTGACGCCA CTCTGCTGATCCATCTGGGCATGCGCGCCGAGAAGGACCTGTCGGTCCTCAACAACCCGACCTGCGAGGAAGAGGAAGTC CTGTTCGCCTCCATCAAGAAGAAGCTGGCGACCGACAAGACCTTCTACACCCGCAACGGCACCGCCATCCGCGGCGTGAC CGAGGAGACCACCACCGGCGTGCACCGTCTCTACGAGATGGAGAAGAAGGGCACCCTGCTGTGGCCGGCCATCAACGTCA ACGACTCGGTGACCAAGTCCAAGTTCGATAACAAGTACGGCTGCCGCGAGTCGCTGGTCGATGGCATCCGCCGCGCCACC GACGTCATGCTGGCCGGCAAGGTCGCCGTGGTCGCCGGCTTCGGCGATGTGGGCAAGGGCTCGGCCGAGTCGCTGGCGTC CCAGGGCTGCCGCGTCATCGTCACCGAAATCGACCCCATCTGCGCCCTGCAGGCCTGCATGGAAGGCTATGAGGTCGCCA CCATGGAAGAGGCCGCGCCCCGCGGCGACATCTTCGTCACCACCACCGGCAATGTGGACGTGATCACCGTCGATCACATG CGCGCCATGAAGGACCGCGCCATCGTCTGCAACATCGGTCACTTCGACTCGGAGATCCAGGTCGCCGGCCTGAAGAACTT CGAGTGGAACAACATCAAGCCGCAGGTGGACGAGATCAAGTTCCCCAGCGGCAACCGCATCCTGCTGCTGGCCGAGGGCC GTCTCGTCAACCTGGGCTGCGCCACCGGCCACCCCTCCTTCGTGATGAGCGCCTCGTTCACCAACCAGGTGATGGCCCAG ATCGAGATCTTCACCAATCCCGGCAAGTACGAGAAGAAGGTCTACGTCCTGCCCAAGACCCTGGACGAGAAGGTGGCCAT GCTGCACCTCGCCAAGCTGGGCGCCACCCTGACCAAGCTGAACAAGAAGCAGTCCGATTATATCGGCGTCGCGGTCGAAG GCCCCTTCAAGCCTGAAACCTATCGGTACTAG
Upstream 100 bases:
>100_bases GGGCCATACTCACATAAAGATATCTTTATATCGTGTTGCGTTTTGCCGAAAGGGCTGGTACACAGGCGGCAACTGGAACA TTCCTGTCCGAGGGACCATC
Downstream 100 bases:
>100_bases ACTGCGAATACGTTAGACCGACGAAGCCCCCTTCCGGTGACGGAAGGGGGCTTTTTCTTGGGGAGAACCGAGCATGTGCA CCTGTGGCAAGACCGGTCCC
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MTDYVVADIALAAWGRKELDIAESEMPGLMATREEFGPSQPLKGARIAGSLHMTIQTGVLIETLKALGADIRWASCNIFS TQDHAAAAIAAAGIPVFAVKGENLEEYWDYTHRIFEWADGGCPNMILDDGGDATLLIHLGMRAEKDLSVLNNPTCEEEEV LFASIKKKLATDKTFYTRNGTAIRGVTEETTTGVHRLYEMEKKGTLLWPAINVNDSVTKSKFDNKYGCRESLVDGIRRAT DVMLAGKVAVVAGFGDVGKGSAESLASQGCRVIVTEIDPICALQACMEGYEVATMEEAAPRGDIFVTTTGNVDVITVDHM RAMKDRAIVCNIGHFDSEIQVAGLKNFEWNNIKPQVDEIKFPSGNRILLLAEGRLVNLGCATGHPSFVMSASFTNQVMAQ IEIFTNPGKYEKKVYVLPKTLDEKVAMLHLAKLGATLTKLNKKQSDYIGVAVEGPFKPETYRY
Sequences:
>Translated_463_residues MTDYVVADIALAAWGRKELDIAESEMPGLMATREEFGPSQPLKGARIAGSLHMTIQTGVLIETLKALGADIRWASCNIFS TQDHAAAAIAAAGIPVFAVKGENLEEYWDYTHRIFEWADGGCPNMILDDGGDATLLIHLGMRAEKDLSVLNNPTCEEEEV LFASIKKKLATDKTFYTRNGTAIRGVTEETTTGVHRLYEMEKKGTLLWPAINVNDSVTKSKFDNKYGCRESLVDGIRRAT DVMLAGKVAVVAGFGDVGKGSAESLASQGCRVIVTEIDPICALQACMEGYEVATMEEAAPRGDIFVTTTGNVDVITVDHM RAMKDRAIVCNIGHFDSEIQVAGLKNFEWNNIKPQVDEIKFPSGNRILLLAEGRLVNLGCATGHPSFVMSASFTNQVMAQ IEIFTNPGKYEKKVYVLPKTLDEKVAMLHLAKLGATLTKLNKKQSDYIGVAVEGPFKPETYRY >Mature_462_residues TDYVVADIALAAWGRKELDIAESEMPGLMATREEFGPSQPLKGARIAGSLHMTIQTGVLIETLKALGADIRWASCNIFST QDHAAAAIAAAGIPVFAVKGENLEEYWDYTHRIFEWADGGCPNMILDDGGDATLLIHLGMRAEKDLSVLNNPTCEEEEVL FASIKKKLATDKTFYTRNGTAIRGVTEETTTGVHRLYEMEKKGTLLWPAINVNDSVTKSKFDNKYGCRESLVDGIRRATD VMLAGKVAVVAGFGDVGKGSAESLASQGCRVIVTEIDPICALQACMEGYEVATMEEAAPRGDIFVTTTGNVDVITVDHMR AMKDRAIVCNIGHFDSEIQVAGLKNFEWNNIKPQVDEIKFPSGNRILLLAEGRLVNLGCATGHPSFVMSASFTNQVMAQI EIFTNPGKYEKKVYVLPKTLDEKVAMLHLAKLGATLTKLNKKQSDYIGVAVEGPFKPETYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=462, Percent_Identity=62.3376623376623, Blast_Score=537, Evalue=1e-153, Organism=Homo sapiens, GI239937451, Length=440, Percent_Identity=61.3636363636364, Blast_Score=503, Evalue=1e-142, Organism=Homo sapiens, GI298286489, Length=465, Percent_Identity=47.9569892473118, Blast_Score=434, Evalue=1e-122, Organism=Homo sapiens, GI195539349, Length=465, Percent_Identity=47.9569892473118, Blast_Score=434, Evalue=1e-121, Organism=Homo sapiens, GI24308043, Length=465, Percent_Identity=47.9569892473118, Blast_Score=433, Evalue=1e-121, Organism=Homo sapiens, GI195539337, Length=465, Percent_Identity=47.9569892473118, Blast_Score=433, Evalue=1e-121, Organism=Homo sapiens, GI21361647, Length=465, Percent_Identity=46.4516129032258, Blast_Score=408, Evalue=1e-114, Organism=Caenorhabditis elegans, GI17506425, Length=465, Percent_Identity=60.8602150537634, Blast_Score=540, Evalue=1e-154, Organism=Saccharomyces cerevisiae, GI6320882, Length=478, Percent_Identity=58.9958158995816, Blast_Score=514, Evalue=1e-146, Organism=Drosophila melanogaster, GI24642172, Length=462, Percent_Identity=61.6883116883117, Blast_Score=528, Evalue=1e-150, Organism=Drosophila melanogaster, GI45553387, Length=464, Percent_Identity=50.4310344827586, Blast_Score=433, Evalue=1e-121, Organism=Drosophila melanogaster, GI24656245, Length=466, Percent_Identity=48.068669527897, Blast_Score=432, Evalue=1e-121, Organism=Drosophila melanogaster, GI45553385, Length=463, Percent_Identity=50.3239740820734, Blast_Score=430, Evalue=1e-120,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 50586; Mature: 50454
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDYVVADIALAAWGRKELDIAESEMPGLMATREEFGPSQPLKGARIAGSLHMTIQTGVL CCCEEEEHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEECEEEEEEECCHH IETLKALGADIRWASCNIFSTQDHAAAAIAAAGIPVFAVKGENLEEYWDYTHRIFEWADG HHHHHHHCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCC GCPNMILDDGGDATLLIHLGMRAEKDLSVLNNPTCEEEEVLFASIKKKLATDKTFYTRNG CCCCEEEECCCCEEEEEEECCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCC TAIRGVTEETTTGVHRLYEMEKKGTLLWPAINVNDSVTKSKFDNKYGCRESLVDGIRRAT CEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHH DVMLAGKVAVVAGFGDVGKGSAESLASQGCRVIVTEIDPICALQACMEGYEVATMEEAAP HHHEECCEEEEEECCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHCCCEEEEHHHCCC RGDIFVTTTGNVDVITVDHMRAMKDRAIVCNIGHFDSEIQVAGLKNFEWNNIKPQVDEIK CCCEEEEECCCEEEEEEHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHEE FPSGNRILLLAEGRLVNLGCATGHPSFVMSASFTNQVMAQIEIFTNPGKYEKKVYVLPKT CCCCCEEEEEECCEEEEEEECCCCCCEEEECCHHHEEEEEEEEEECCCCCCCEEEEECCC LDEKVAMLHLAKLGATLTKLNKKQSDYIGVAVEGPFKPETYRY HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure TDYVVADIALAAWGRKELDIAESEMPGLMATREEFGPSQPLKGARIAGSLHMTIQTGVL CCEEEEHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEECEEEEEEECCHH IETLKALGADIRWASCNIFSTQDHAAAAIAAAGIPVFAVKGENLEEYWDYTHRIFEWADG HHHHHHHCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCC GCPNMILDDGGDATLLIHLGMRAEKDLSVLNNPTCEEEEVLFASIKKKLATDKTFYTRNG CCCCEEEECCCCEEEEEEECCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCC TAIRGVTEETTTGVHRLYEMEKKGTLLWPAINVNDSVTKSKFDNKYGCRESLVDGIRRAT CEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHH DVMLAGKVAVVAGFGDVGKGSAESLASQGCRVIVTEIDPICALQACMEGYEVATMEEAAP HHHEECCEEEEEECCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHCCCEEEEHHHCCC RGDIFVTTTGNVDVITVDHMRAMKDRAIVCNIGHFDSEIQVAGLKNFEWNNIKPQVDEIK CCCEEEEECCCEEEEEEHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHEE FPSGNRILLLAEGRLVNLGCATGHPSFVMSASFTNQVMAQIEIFTNPGKYEKKVYVLPKT CCCCCEEEEEECCEEEEEEECCCCCCEEEECCHHHEEEEEEEEEECCCCCCCEEEEECCC LDEKVAMLHLAKLGATLTKLNKKQSDYIGVAVEGPFKPETYRY HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]