| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83313489
Identifier: 83313489
GI number: 83313489
Start: 4793028
End: 4793675
Strand: Reverse
Name: 83313489
Synonym: amb4390
Alternate gene names: NA
Gene position: 4793675-4793028 (Counterclockwise)
Preceding gene: 83313490
Following gene: 83313488
Centisome position: 96.51
GC content: 70.99
Gene sequence:
>648_bases ATGTGCACCTGTGGCAAGACCGGTCCCAACCGTCGCCGCCTGCTGACCGGCATGGCCGCCCTGGCGGCCTTCGGGCGATT GCGCCCGGCCATTGCCATGCCATCGGGCAGCGGGACCCTGCGGCAGGGACACGGCGAGGTGCTGATCAACGGCAGGCCCG CCCCGGTGGGCAGTGCCGTCGCCGCCGGTGACACGGTTGCCGCCGGGCCGGGGGCCCAGGCGGTGTTCACCCTGGGCGAC GACGCCTTCCTGCTGCGCTCGGACGGCGCGGTAACCGTTTCCGACGGTCCGGCCGGACGCGAGGTCAGTCTGGAAAGCGG CCGCGTCCTGTCGGTTTTCGGCCCCAAGCAGATCACCCTGAAGACCCCCCACGCCAATGTGGGTATCCGCGGCACGGCCG TGTACCTGGAAAGCCATTCCGTATCGACCAATGTCTGCGTCTGCTACGGCCGCGCGGTGATGATCCCCACGGGCGATCCC GCCGGGGCCGAGGAGGTGGCGACCCGCCACCACGACGCCCCGCGCCAGATCTTCCCCGCCGGCCGCCGGCCGGTGATGGA GCCCTATAGGGTGACCAACCACGCCGACGAGGAACTGGTGATGCTGGAAGCCCTGCTGGGCCGGGTGCCGCCGTTCGTGG CCAAGTAG
Upstream 100 bases:
>100_bases TTCAAGCCTGAAACCTATCGGTACTAGACTGCGAATACGTTAGACCGACGAAGCCCCCTTCCGGTGACGGAAGGGGGCTT TTTCTTGGGGAGAACCGAGC
Downstream 100 bases:
>100_bases TGCCCCCTTGCCCCCAAGCCCGCTTGGCCCCAAACTCTGGCCCCATGCGTGCCCTGATCCTCGCCCTTTGCCTGCTGCTT GCCCCCGCCGTTGCCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MCTCGKTGPNRRRLLTGMAALAAFGRLRPAIAMPSGSGTLRQGHGEVLINGRPAPVGSAVAAGDTVAAGPGAQAVFTLGD DAFLLRSDGAVTVSDGPAGREVSLESGRVLSVFGPKQITLKTPHANVGIRGTAVYLESHSVSTNVCVCYGRAVMIPTGDP AGAEEVATRHHDAPRQIFPAGRRPVMEPYRVTNHADEELVMLEALLGRVPPFVAK
Sequences:
>Translated_215_residues MCTCGKTGPNRRRLLTGMAALAAFGRLRPAIAMPSGSGTLRQGHGEVLINGRPAPVGSAVAAGDTVAAGPGAQAVFTLGD DAFLLRSDGAVTVSDGPAGREVSLESGRVLSVFGPKQITLKTPHANVGIRGTAVYLESHSVSTNVCVCYGRAVMIPTGDP AGAEEVATRHHDAPRQIFPAGRRPVMEPYRVTNHADEELVMLEALLGRVPPFVAK >Mature_215_residues MCTCGKTGPNRRRLLTGMAALAAFGRLRPAIAMPSGSGTLRQGHGEVLINGRPAPVGSAVAAGDTVAAGPGAQAVFTLGD DAFLLRSDGAVTVSDGPAGREVSLESGRVLSVFGPKQITLKTPHANVGIRGTAVYLESHSVSTNVCVCYGRAVMIPTGDP AGAEEVATRHHDAPRQIFPAGRRPVMEPYRVTNHADEELVMLEALLGRVPPFVAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22314; Mature: 22314
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTCGKTGPNRRRLLTGMAALAAFGRLRPAIAMPSGSGTLRQGHGEVLINGRPAPVGSAV CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCEECCCCEEEECCCCCCCCCHH AAGDTVAAGPGAQAVFTLGDDAFLLRSDGAVTVSDGPAGREVSLESGRVLSVFGPKQITL CCCCEEECCCCCCEEEEECCCEEEEECCCEEEECCCCCCCEEEECCCCEEEEECCCEEEE KTPHANVGIRGTAVYLESHSVSTNVCVCYGRAVMIPTGDPAGAEEVATRHHDAPRQIFPA ECCCCCCCEEEEEEEEECCCCCCCEEEEECCEEEEECCCCCCHHHHHHHCCCCCHHHCCC GRRPVMEPYRVTNHADEELVMLEALLGRVPPFVAK CCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MCTCGKTGPNRRRLLTGMAALAAFGRLRPAIAMPSGSGTLRQGHGEVLINGRPAPVGSAV CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCEECCCCEEEECCCCCCCCCHH AAGDTVAAGPGAQAVFTLGDDAFLLRSDGAVTVSDGPAGREVSLESGRVLSVFGPKQITL CCCCEEECCCCCCEEEEECCCEEEEECCCEEEECCCCCCCEEEECCCCEEEEECCCEEEE KTPHANVGIRGTAVYLESHSVSTNVCVCYGRAVMIPTGDPAGAEEVATRHHDAPRQIFPA ECCCCCCCEEEEEEEEECCCCCCCEEEEECCEEEEECCCCCCHHHHHHHCCCCCHHHCCC GRRPVMEPYRVTNHADEELVMLEALLGRVPPFVAK CCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA