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The map label for this gene is 83313460

Identifier: 83313460

GI number: 83313460

Start: 4763745

End: 4764128

Strand: Reverse

Name: 83313460

Synonym: amb4361

Alternate gene names: NA

Gene position: 4764128-4763745 (Counterclockwise)

Preceding gene: 83313461

Following gene: 83313458

Centisome position: 95.91

GC content: 61.98

Gene sequence:

>384_bases
ATGCGTTTGCGGCGGACGTTACTGGGGCTCAGCCAGGAAAAGCTTGGCGAGTTGATAGGACTTACCTTCCAGCAGGTGCA
GAAATACGAACGCGGCGCCAATCGAATCAGTTGCTCGCGACTGTTCGATTTGTCCCGGTCGCTTGAAGTACCGATCTCAT
ACTTCTTCGACGACATGCCCGAGGAGACCAAGGGCCTGTCGCCGGTGCAGATGGTGCGCGAGCCTCCCAAGGAGGAGCCG
CCGGCCGCCGAGGCCGACCCCCGCCTGCGCCGCGAGACGCTGGAACTGGTGCGCAATTACTACAGCATCGTCGACCCCGA
CGTGCGCCGTCGCATCTATGATCTGGCCAAGGCTCTTTCCGACCGGGGCGGCGAGGAAGAGTAG

Upstream 100 bases:

>100_bases
GCTTCATGTGACAGAGGGAAACATGCCGCGCAGAAAGGCAAATCGAGGCCGTACCCCAGCCGGGGCGCCTAATCCGATCG
ATGTCCATGTCGGATCGCGC

Downstream 100 bases:

>100_bases
GCCTCAGCCGCCGCCCGCCGGACTCCGGATGGGCAGCGGATACGTCGCCCGGGGTGGCAGGCGGTGAATCAGCACCGCCA
CCGCCACCAGGGTCACCGCC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MRLRRTLLGLSQEKLGELIGLTFQQVQKYERGANRISCSRLFDLSRSLEVPISYFFDDMPEETKGLSPVQMVREPPKEEP
PAAEADPRLRRETLELVRNYYSIVDPDVRRRIYDLAKALSDRGGEEE

Sequences:

>Translated_127_residues
MRLRRTLLGLSQEKLGELIGLTFQQVQKYERGANRISCSRLFDLSRSLEVPISYFFDDMPEETKGLSPVQMVREPPKEEP
PAAEADPRLRRETLELVRNYYSIVDPDVRRRIYDLAKALSDRGGEEE
>Mature_127_residues
MRLRRTLLGLSQEKLGELIGLTFQQVQKYERGANRISCSRLFDLSRSLEVPISYFFDDMPEETKGLSPVQMVREPPKEEP
PAAEADPRLRRETLELVRNYYSIVDPDVRRRIYDLAKALSDRGGEEE

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 14744; Mature: 14744

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRRTLLGLSQEKLGELIGLTFQQVQKYERGANRISCSRLFDLSRSLEVPISYFFDDMP
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCCC
EETKGLSPVQMVREPPKEEPPAAEADPRLRRETLELVRNYYSIVDPDVRRRIYDLAKALS
HHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
DRGGEEE
HCCCCCC
>Mature Secondary Structure
MRLRRTLLGLSQEKLGELIGLTFQQVQKYERGANRISCSRLFDLSRSLEVPISYFFDDMP
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCCC
EETKGLSPVQMVREPPKEEPPAAEADPRLRRETLELVRNYYSIVDPDVRRRIYDLAKALS
HHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
DRGGEEE
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]