| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is yieG [C]
Identifier: 83313458
GI number: 83313458
Start: 4761816
End: 4763114
Strand: Reverse
Name: yieG [C]
Synonym: amb4359
Alternate gene names: 83313458
Gene position: 4763114-4761816 (Counterclockwise)
Preceding gene: 83313460
Following gene: 83313451
Centisome position: 95.89
GC content: 69.67
Gene sequence:
>1299_bases ATGTTGCAGCGTCTGTTCGATCTGTCCGGCCACCGGACCAGCCTGCGCACCGAGTGTCTGGCGGGCGCCACCACCTTCCT GACCATGGCCTATATCATCTTCGTCAACCCGGCCATGCTGGCCGAGGCGGGCATGGACAAGGGCGCGGTATTCGTCGCCA CCTGCCTGGCGGCGGCCCTGGGCAGCGCCGCCATGGGGCTGCTGGCCAATTATCCCATCGCCCTGGCTCCCGGCATGGGG CTCAACGCCTATTTCACCTATGGCGTGGTCATCGGCATGGGCGTGCCCTGGCCGGTTGCCCTGGGGGCGGTGTTCGTCTC CGGCGTGCTGTTCCTGGTTCTGGCGCTGACCCGGGTGCGCGAGGCCATCATCAACGCCGTGCCGCAATCGCTGAAGCTGG CCATTTCGGCGGGAATCGGCCTGTTCCTCGGCCTGATCGCCTTCGAAAGCGCCGGGCTGGTCGAGGGGCACAAGGCCACC CTGGTGACGCTCGGCCATCTCGGCCGGCCGGAGCCGCTGCTGGCGGCGGCGGGCTTCGTGGCGATGGTCGGGCTGGAGGC CCGCCGGGTGCCGGGTGCCATCATGATCGGCATCCTGGGCACGGCGGCGGCCGGCATGGCCCTGGGGGTCACGCCGTTCG GCGGCATCGCCGCCTGGCCGCCGTCGCTGGCGCCCACCTTTCTCAAGATGGACGTGGCCGGAGCCTTGAACCTGGGGCTA GTAACCATCGTCTTCGCCCTGCTGTTCGTCGATCTGTTCGACAATGCCGGAACACTGATTGGTCTGGCCCACCGGGCGGG CATGCTGGACGCGCGGGGCAGGCTGCCGCGGCTGGGCCGCGCCCTGATCGCCGATTCCCTGGCGGCCATGGCCGGTGGTG CGTTGGGGACCTCCACCACCACCAGCTATATCGAAAGCGCCTCGGGCATCAATGCCGGCGGCCGCACCGGGTTGGCGGCG GTGGTCACCGGCCTGCTGTTCGCCGCCGCCCTGTTTCTGGCCCCCCTGGCGGCAGCCATTCCGGCCTATGCCACGGCGCC GGCCCTGCTGTTCGTGGCCTGCCTGATGGCCCGCTCCCTGGCCGACATCGCCTGGGACGACGTCACCGAGGCGGTCCCGG CGGTGGTCACCGCCCTGGCCATGCCGTTCACCTTCTCCATCGCCCACGGCATTTCGCTGGGGTTTATCACCTTCGCGGCG GTCAAGCTGCTGGGCGGCAAGGCGCGCGACGTCGGCCCGGCGGTGTGGCTGCTGGCGGGGGCCTTCGTGCTGAAATTCGT GCTGCTGGGCAGTGTTTAG
Upstream 100 bases:
>100_bases ACGCCTTCGAAAAGCGGGAAAAAAATACAACTTTATCGCCGCACGCATCCATGATGAGGGTCAAGGATGATGCGGATTCC TTGAAAAGGGGGCTGGGGCC
Downstream 100 bases:
>100_bases GGAGCCCGCTACGCGGCCGGGCTATCGCCCGGACCCATTCGGAGGCACAGCCTCCGAGCCTCCAGGATATTTATTCATAA GAAACTGGAGGGTTGGGGAG
Product: permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MLQRLFDLSGHRTSLRTECLAGATTFLTMAYIIFVNPAMLAEAGMDKGAVFVATCLAAALGSAAMGLLANYPIALAPGMG LNAYFTYGVVIGMGVPWPVALGAVFVSGVLFLVLALTRVREAIINAVPQSLKLAISAGIGLFLGLIAFESAGLVEGHKAT LVTLGHLGRPEPLLAAAGFVAMVGLEARRVPGAIMIGILGTAAAGMALGVTPFGGIAAWPPSLAPTFLKMDVAGALNLGL VTIVFALLFVDLFDNAGTLIGLAHRAGMLDARGRLPRLGRALIADSLAAMAGGALGTSTTTSYIESASGINAGGRTGLAA VVTGLLFAAALFLAPLAAAIPAYATAPALLFVACLMARSLADIAWDDVTEAVPAVVTALAMPFTFSIAHGISLGFITFAA VKLLGGKARDVGPAVWLLAGAFVLKFVLLGSV
Sequences:
>Translated_432_residues MLQRLFDLSGHRTSLRTECLAGATTFLTMAYIIFVNPAMLAEAGMDKGAVFVATCLAAALGSAAMGLLANYPIALAPGMG LNAYFTYGVVIGMGVPWPVALGAVFVSGVLFLVLALTRVREAIINAVPQSLKLAISAGIGLFLGLIAFESAGLVEGHKAT LVTLGHLGRPEPLLAAAGFVAMVGLEARRVPGAIMIGILGTAAAGMALGVTPFGGIAAWPPSLAPTFLKMDVAGALNLGL VTIVFALLFVDLFDNAGTLIGLAHRAGMLDARGRLPRLGRALIADSLAAMAGGALGTSTTTSYIESASGINAGGRTGLAA VVTGLLFAAALFLAPLAAAIPAYATAPALLFVACLMARSLADIAWDDVTEAVPAVVTALAMPFTFSIAHGISLGFITFAA VKLLGGKARDVGPAVWLLAGAFVLKFVLLGSV >Mature_432_residues MLQRLFDLSGHRTSLRTECLAGATTFLTMAYIIFVNPAMLAEAGMDKGAVFVATCLAAALGSAAMGLLANYPIALAPGMG LNAYFTYGVVIGMGVPWPVALGAVFVSGVLFLVLALTRVREAIINAVPQSLKLAISAGIGLFLGLIAFESAGLVEGHKAT LVTLGHLGRPEPLLAAAGFVAMVGLEARRVPGAIMIGILGTAAAGMALGVTPFGGIAAWPPSLAPTFLKMDVAGALNLGL VTIVFALLFVDLFDNAGTLIGLAHRAGMLDARGRLPRLGRALIADSLAAMAGGALGTSTTTSYIESASGINAGGRTGLAA VVTGLLFAAALFLAPLAAAIPAYATAPALLFVACLMARSLADIAWDDVTEAVPAVVTALAMPFTFSIAHGISLGFITFAA VKLLGGKARDVGPAVWLLAGAFVLKFVLLGSV
Specific function: Unknown
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790150, Length=429, Percent_Identity=48.018648018648, Blast_Score=399, Evalue=1e-112, Organism=Escherichia coli, GI87082309, Length=428, Percent_Identity=45.7943925233645, Blast_Score=393, Evalue=1e-110, Organism=Escherichia coli, GI1790499, Length=430, Percent_Identity=38.8372093023256, Blast_Score=252, Evalue=3e-68, Organism=Escherichia coli, GI48994909, Length=403, Percent_Identity=37.9652605459057, Blast_Score=230, Evalue=1e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 43731; Mature: 43731
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQRLFDLSGHRTSLRTECLAGATTFLTMAYIIFVNPAMLAEAGMDKGAVFVATCLAAAL CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHH GSAAMGLLANYPIALAPGMGLNAYFTYGVVIGMGVPWPVALGAVFVSGVLFLVLALTRVR HHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EAIINAVPQSLKLAISAGIGLFLGLIAFESAGLVEGHKATLVTLGHLGRPEPLLAAAGFV HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHH AMVGLEARRVPGAIMIGILGTAAAGMALGVTPFGGIAAWPPSLAPTFLKMDVAGALNLGL HHHCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH VTIVFALLFVDLFDNAGTLIGLAHRAGMLDARGRLPRLGRALIADSLAAMAGGALGTSTT HHHHHHHHHHHHHCCCCHHEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHH TSYIESASGINAGGRTGLAAVVTGLLFAAALFLAPLAAAIPAYATAPALLFVACLMARSL HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADIAWDDVTEAVPAVVTALAMPFTFSIAHGISLGFITFAAVKLLGGKARDVGPAVWLLAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AFVLKFVLLGSV HHHHHHHHHCCC >Mature Secondary Structure MLQRLFDLSGHRTSLRTECLAGATTFLTMAYIIFVNPAMLAEAGMDKGAVFVATCLAAAL CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHH GSAAMGLLANYPIALAPGMGLNAYFTYGVVIGMGVPWPVALGAVFVSGVLFLVLALTRVR HHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EAIINAVPQSLKLAISAGIGLFLGLIAFESAGLVEGHKATLVTLGHLGRPEPLLAAAGFV HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHH AMVGLEARRVPGAIMIGILGTAAAGMALGVTPFGGIAAWPPSLAPTFLKMDVAGALNLGL HHHCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH VTIVFALLFVDLFDNAGTLIGLAHRAGMLDARGRLPRLGRALIADSLAAMAGGALGTSTT HHHHHHHHHHHHHCCCCHHEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHH TSYIESASGINAGGRTGLAAVVTGLLFAAALFLAPLAAAIPAYATAPALLFVACLMARSL HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADIAWDDVTEAVPAVVTALAMPFTFSIAHGISLGFITFAAVKLLGGKARDVGPAVWLLAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AFVLKFVLLGSV HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]