| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is actP [H]
Identifier: 83313432
GI number: 83313432
Start: 4738470
End: 4740134
Strand: Reverse
Name: actP [H]
Synonym: amb4333
Alternate gene names: 83313432
Gene position: 4740134-4738470 (Counterclockwise)
Preceding gene: 83313438
Following gene: 83313430
Centisome position: 95.43
GC content: 67.15
Gene sequence:
>1665_bases ATGTCCCACTTCCTCCGCCTCGGCGTTCTGTCCCTGATGCTGCTGGCCCCGTCCCTGCCGGCGCTGGCCGCCGGCGCCGA TCTCGGCCAGGCTGCCCGGCAGGCTACCAACTGGCACGCCATCCTGATGTTCGTGGGCTTCGTCCTGCTGACCCTGGGCA TTACCTGGTGGGCCTCCAAACGCACGAAATCGGCGGCGGACTTCTATACGGCCGGGGGCGGTATCACCGGCTTTCAGAAC GGGCTGGCCATCGCCGGTGACTTCATGTCGGCGGCATCCTTCCTGGGGGTGACCGCCCTGCTCTACGGCACCGGCCTGGA CGGCATGGTTTATGCCGTGGGCGTGGTGGTGGGCTGGCCGCTGATGCTGTTCCTGATCGCAGAGCCGCTGCGCAACCTCG GCAAGTACACCTTCGCCGACGTGGTGGCGTATCGTCTGGCCAAGGTGCCGGTGCGGACCTATGCGGCGTTCAGCTCGCTG ACCGTGGTGGTGTTCTACCTGATCGCCCAGATGGTCGGCGCCGGGCAGCTGATCAAGCTGCTGTTCGGCATGGACTACCT GTACGCCCTGTTCCTGGTGGGCGGGCTGATGATGATCTACGTCACCTTCGGCGGCATGGCCGCCACCACCTGGGTGCAGA TCATCAAGGCGGTGCTGCTGCTGTCGGGCGCCACCTTCATGGCGGGGGCGGTGCTGTCCCGCTTCGGCTTCTCGCCCGAG GCCATGTTCGCCAAGGCCGTTCAGGTCAAGGGCTCCAACGCCATCATGTCGCCGGGCCTGCTGTTCAAGGACCCCATCGA CACCATTTCCCTGGCCATGGCGCTGGCCTTCGGCACCGCCGGCCTGCCTCATATCCTGATGCGCTTCTTCACGGTGCCCG ACGCCAAGGAGGCACGCAAATCGGTGTTCTACGCCACCGCTTTCATCGGCTTCTTCTATGTGCTGGCGGTGGTGATCGGC ATCGGCGCCATCGCCCTGGTGGCCACCGACCCGACCTATCTGGCCGACGGCAAGGCGCTGAAGGGCGGCGGCAACATGGC GGCCGTGTGGCTGGCCCATGCGGTGGGCGGCGATTTGTTCCTGGGCTTCATCTCGGCGGTGGCCTTCGCCACCATCCTGG CCGTGGTGGCGGGGCTGACCCTGGCGGGCGCCTCGGCCATTTCCCACGATCTCTACGCCAACGTCTTCGCCCGCGGCCAC GCCAAGGAGGAGACCGAACTGCGCATCTCGCGGCTGGCCAGTCTGGCGCTCGGCGTGATCGCCATCATCCTGGGCATGCT GTTCGAGAAGCAGAACATCGCCTATCTGGCCGGTCTGACCCTGGCCATCGCCGCCTCGGCCAATTTCCCGCTGCTGCTGC TGTCCATGCTGTGGCCGGGCCTGACGTCGCGCGGAGCCATCCTGGGCGGCGTTGCCGGGCTGGTCTCGGCGGTGGTGCTG ACCGTGCTGGGGCCGGCGGTGTGGAAAGCCGTGCTGGGCAACCCCCAGCCCATCTTCCCCTGGGGCAATCCCGCCCTGTT CTCGGTGGCGGCGGGGTTCGCCGCCACCTGGTTCTTCTCGGTCACCGACGGCAGCGAGCGGGCGGTGCGGGAGAAGGCCG AGTTTAATGCCCAGTTCGTCCGTTCGCAGACCGGGCTGGGGGCGGAAGGAGTCTCGGCTCACTGA
Upstream 100 bases:
>100_bases GATGGCTGTTCGGGAGAGGCGGCGCGTAAAGCTTGCGCGGGAGGAATGAAATAAGTAAACAGGTACCAAAATACCATAAT TAGCCCGGAGAGGCCGTCCC
Downstream 100 bases:
>100_bases TCCGTCCCCCGGGCGGCCGGGGTCAGCGGCCCTTGTCGCTTCTCAGCACGTAAAGGCCGGACGCCATCACCACCAGGGCG CCGGCCAGCGTGTTGAGAGT
Product: symporter
Products: NA
Alternate protein names: Acetate permease; Acetate transporter ActP [H]
Number of amino acids: Translated: 554; Mature: 553
Protein sequence:
>554_residues MSHFLRLGVLSLMLLAPSLPALAAGADLGQAARQATNWHAILMFVGFVLLTLGITWWASKRTKSAADFYTAGGGITGFQN GLAIAGDFMSAASFLGVTALLYGTGLDGMVYAVGVVVGWPLMLFLIAEPLRNLGKYTFADVVAYRLAKVPVRTYAAFSSL TVVVFYLIAQMVGAGQLIKLLFGMDYLYALFLVGGLMMIYVTFGGMAATTWVQIIKAVLLLSGATFMAGAVLSRFGFSPE AMFAKAVQVKGSNAIMSPGLLFKDPIDTISLAMALAFGTAGLPHILMRFFTVPDAKEARKSVFYATAFIGFFYVLAVVIG IGAIALVATDPTYLADGKALKGGGNMAAVWLAHAVGGDLFLGFISAVAFATILAVVAGLTLAGASAISHDLYANVFARGH AKEETELRISRLASLALGVIAIILGMLFEKQNIAYLAGLTLAIAASANFPLLLLSMLWPGLTSRGAILGGVAGLVSAVVL TVLGPAVWKAVLGNPQPIFPWGNPALFSVAAGFAATWFFSVTDGSERAVREKAEFNAQFVRSQTGLGAEGVSAH
Sequences:
>Translated_554_residues MSHFLRLGVLSLMLLAPSLPALAAGADLGQAARQATNWHAILMFVGFVLLTLGITWWASKRTKSAADFYTAGGGITGFQN GLAIAGDFMSAASFLGVTALLYGTGLDGMVYAVGVVVGWPLMLFLIAEPLRNLGKYTFADVVAYRLAKVPVRTYAAFSSL TVVVFYLIAQMVGAGQLIKLLFGMDYLYALFLVGGLMMIYVTFGGMAATTWVQIIKAVLLLSGATFMAGAVLSRFGFSPE AMFAKAVQVKGSNAIMSPGLLFKDPIDTISLAMALAFGTAGLPHILMRFFTVPDAKEARKSVFYATAFIGFFYVLAVVIG IGAIALVATDPTYLADGKALKGGGNMAAVWLAHAVGGDLFLGFISAVAFATILAVVAGLTLAGASAISHDLYANVFARGH AKEETELRISRLASLALGVIAIILGMLFEKQNIAYLAGLTLAIAASANFPLLLLSMLWPGLTSRGAILGGVAGLVSAVVL TVLGPAVWKAVLGNPQPIFPWGNPALFSVAAGFAATWFFSVTDGSERAVREKAEFNAQFVRSQTGLGAEGVSAH >Mature_553_residues SHFLRLGVLSLMLLAPSLPALAAGADLGQAARQATNWHAILMFVGFVLLTLGITWWASKRTKSAADFYTAGGGITGFQNG LAIAGDFMSAASFLGVTALLYGTGLDGMVYAVGVVVGWPLMLFLIAEPLRNLGKYTFADVVAYRLAKVPVRTYAAFSSLT VVVFYLIAQMVGAGQLIKLLFGMDYLYALFLVGGLMMIYVTFGGMAATTWVQIIKAVLLLSGATFMAGAVLSRFGFSPEA MFAKAVQVKGSNAIMSPGLLFKDPIDTISLAMALAFGTAGLPHILMRFFTVPDAKEARKSVFYATAFIGFFYVLAVVIGI GAIALVATDPTYLADGKALKGGGNMAAVWLAHAVGGDLFLGFISAVAFATILAVVAGLTLAGASAISHDLYANVFARGHA KEETELRISRLASLALGVIAIILGMLFEKQNIAYLAGLTLAIAASANFPLLLLSMLWPGLTSRGAILGGVAGLVSAVVLT VLGPAVWKAVLGNPQPIFPWGNPALFSVAAGFAATWFFSVTDGSERAVREKAEFNAQFVRSQTGLGAEGVSAH
Specific function: Transports acetate [H]
COG id: COG4147
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=528, Percent_Identity=22.9166666666667, Blast_Score=96, Evalue=1e-19, Organism=Escherichia coli, GI1790503, Length=544, Percent_Identity=63.7867647058823, Blast_Score=670, Evalue=0.0, Organism=Escherichia coli, GI1787251, Length=442, Percent_Identity=26.4705882352941, Blast_Score=85, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014083 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 57976; Mature: 57845
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHFLRLGVLSLMLLAPSLPALAAGADLGQAARQATNWHAILMFVGFVLLTLGITWWASK CCHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC RTKSAADFYTAGGGITGFQNGLAIAGDFMSAASFLGVTALLYGTGLDGMVYAVGVVVGWP CCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LMLFLIAEPLRNLGKYTFADVVAYRLAKVPVRTYAAFSSLTVVVFYLIAQMVGAGQLIKL HHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH LFGMDYLYALFLVGGLMMIYVTFGGMAATTWVQIIKAVLLLSGATFMAGAVLSRFGFSPE HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHH AMFAKAVQVKGSNAIMSPGLLFKDPIDTISLAMALAFGTAGLPHILMRFFTVPDAKEARK HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHH SVFYATAFIGFFYVLAVVIGIGAIALVATDPTYLADGKALKGGGNMAAVWLAHAVGGDLF HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEECCCCEECCCCCHHHHHHHHHHHHHHH LGFISAVAFATILAVVAGLTLAGASAISHDLYANVFARGHAKEETELRISRLASLALGVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH AIILGMLFEKQNIAYLAGLTLAIAASANFPLLLLSMLWPGLTSRGAILGGVAGLVSAVVL HHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH TVLGPAVWKAVLGNPQPIFPWGNPALFSVAAGFAATWFFSVTDGSERAVREKAEFNAQFV HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHH RSQTGLGAEGVSAH HHHCCCCCCCCCCC >Mature Secondary Structure SHFLRLGVLSLMLLAPSLPALAAGADLGQAARQATNWHAILMFVGFVLLTLGITWWASK CHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC RTKSAADFYTAGGGITGFQNGLAIAGDFMSAASFLGVTALLYGTGLDGMVYAVGVVVGWP CCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LMLFLIAEPLRNLGKYTFADVVAYRLAKVPVRTYAAFSSLTVVVFYLIAQMVGAGQLIKL HHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH LFGMDYLYALFLVGGLMMIYVTFGGMAATTWVQIIKAVLLLSGATFMAGAVLSRFGFSPE HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHH AMFAKAVQVKGSNAIMSPGLLFKDPIDTISLAMALAFGTAGLPHILMRFFTVPDAKEARK HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHH SVFYATAFIGFFYVLAVVIGIGAIALVATDPTYLADGKALKGGGNMAAVWLAHAVGGDLF HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEECCCCEECCCCCHHHHHHHHHHHHHHH LGFISAVAFATILAVVAGLTLAGASAISHDLYANVFARGHAKEETELRISRLASLALGVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH AIILGMLFEKQNIAYLAGLTLAIAASANFPLLLLSMLWPGLTSRGAILGGVAGLVSAVVL HHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH TVLGPAVWKAVLGNPQPIFPWGNPALFSVAAGFAATWFFSVTDGSERAVREKAEFNAQFV HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHH RSQTGLGAEGVSAH HHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA