| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83313335
Identifier: 83313335
GI number: 83313335
Start: 4643660
End: 4644418
Strand: Reverse
Name: 83313335
Synonym: amb4236
Alternate gene names: NA
Gene position: 4644418-4643660 (Counterclockwise)
Preceding gene: 83313336
Following gene: 83313328
Centisome position: 93.5
GC content: 63.24
Gene sequence:
>759_bases ATGAAGTGCGTTACTCTGTTCCGCCAGGATGACCATTGCTGGCAGATGTTTGGCCAGGACCCGGACAAGCCCGACAATAT TGTCGACACCAACCAGTACCTGGTCCGGTCCGGCGACAGCGCCATCTTGCTCGATCCCGGCGGGATGGAGGTCTTTCCGG CCATGCTGGCGGCGCTGACCCGCGAGGTCCCGGTGTCCCATCTCAAGGCGCTGTTCCTGTCGCATCAGGACCCGGATATC GGCTCGTCCCTGCCGCTGTGGCGCCGGGTCTGCGAGCCCGACATCAAGATCTACCTGTCCTGGCTGTGGTCCAGTTTCAC CGCCCATTTCGACCGTGAGGCCACCTTCACCACCATTCCCGACGAGGGGATGGAGATTTCGCTGACCCCCGATCTCCGCC TGCGTTTCGTGCCGGCCCATTACCTGCATTCATCGGGGAATTTCAACGTCTACGACCCCAAGGCCAAGGTGCTGTTCTCG GGCGATATCGGCGCGGCCCTGATTCCCAAGGACAAGGCCAGCGGCTCCATGTTCGTGGCCGATTTCGCCTCCCATGTGCA GTACATGGAGGCCTTCCACCGGCGCTGGCTGGGCTCGGCCCAGGCCCGCGACGCCTGGTGCGCCCAGGTTTCCAAGCTGG ACATCGACTTCCTGGCGCCGCAGCACGGCCTGGTGTTCAAGGGCGATGACGTGAAGCGCTTCATCGACTGGTTCGCCGGT TTCGAGATCGGCAGCGGTGTGGCCGCCATGAAGCGGTAG
Upstream 100 bases:
>100_bases GGTTCGCCGCGCCGCCGAGAAGGGTGCGGCCTTGCGGCGCATCGGCCTTGACGCCCTCGACGAACTCCACCGCAACTCAT AGCGAGTCAGGACCCCGCCC
Downstream 100 bases:
>100_bases GCTCGGGACAAACAGGCCCCCCTCCCCGCCGGGAGGGGGGCTTTTTCTTGCCTGGAGTGCGTCAGCGTCAAGCTGAAGCA CTCCAGGAGTCTGTCTATAC
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein; Metallo-Beta-Lactamase Family Protein; Flavoprotein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Histidine Kinase; Metallo-Beta-Lactamase Superfamily Domain Protein; Two-Component Sensor Histidine Kinase; Metallo-Beta-Lactamase Superfamily Hydrolase; Metallo-Beta-Lactamase Superfamily Protein; Diguanylate Cyclase Domain Protein; Metallo-Beta-Lactamase Domain Protein; CDP-Abequose Synthase
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MKCVTLFRQDDHCWQMFGQDPDKPDNIVDTNQYLVRSGDSAILLDPGGMEVFPAMLAALTREVPVSHLKALFLSHQDPDI GSSLPLWRRVCEPDIKIYLSWLWSSFTAHFDREATFTTIPDEGMEISLTPDLRLRFVPAHYLHSSGNFNVYDPKAKVLFS GDIGAALIPKDKASGSMFVADFASHVQYMEAFHRRWLGSAQARDAWCAQVSKLDIDFLAPQHGLVFKGDDVKRFIDWFAG FEIGSGVAAMKR
Sequences:
>Translated_252_residues MKCVTLFRQDDHCWQMFGQDPDKPDNIVDTNQYLVRSGDSAILLDPGGMEVFPAMLAALTREVPVSHLKALFLSHQDPDI GSSLPLWRRVCEPDIKIYLSWLWSSFTAHFDREATFTTIPDEGMEISLTPDLRLRFVPAHYLHSSGNFNVYDPKAKVLFS GDIGAALIPKDKASGSMFVADFASHVQYMEAFHRRWLGSAQARDAWCAQVSKLDIDFLAPQHGLVFKGDDVKRFIDWFAG FEIGSGVAAMKR >Mature_252_residues MKCVTLFRQDDHCWQMFGQDPDKPDNIVDTNQYLVRSGDSAILLDPGGMEVFPAMLAALTREVPVSHLKALFLSHQDPDI GSSLPLWRRVCEPDIKIYLSWLWSSFTAHFDREATFTTIPDEGMEISLTPDLRLRFVPAHYLHSSGNFNVYDPKAKVLFS GDIGAALIPKDKASGSMFVADFASHVQYMEAFHRRWLGSAQARDAWCAQVSKLDIDFLAPQHGLVFKGDDVKRFIDWFAG FEIGSGVAAMKR
Specific function: Unknown
COG id: COG0426
COG function: function code C; Uncharacterized flavoproteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28374; Mature: 28374
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCVTLFRQDDHCWQMFGQDPDKPDNIVDTNQYLVRSGDSAILLDPGGMEVFPAMLAALT CCEEEEEECCCHHHHHHCCCCCCCCCCCCCCHHEEECCCCEEEECCCCHHHHHHHHHHHH REVPVSHLKALFLSHQDPDIGSSLPLWRRVCEPDIKIYLSWLWSSFTAHFDREATFTTIP HHCCHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECC DEGMEISLTPDLRLRFVPAHYLHSSGNFNVYDPKAKVLFSGDIGAALIPKDKASGSMFVA CCCCEEEECCCCEEEEEEHHHEECCCCEEEECCCEEEEEECCCCEEECCCCCCCCCEEHH DFASHVQYMEAFHRRWLGSAQARDAWCAQVSKLDIDFLAPQHGLVFKGDDVKRFIDWFAG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEECCCCCEEEECCHHHHHHHHHHC FEIGSGVAAMKR CCCCCCHHHHCC >Mature Secondary Structure MKCVTLFRQDDHCWQMFGQDPDKPDNIVDTNQYLVRSGDSAILLDPGGMEVFPAMLAALT CCEEEEEECCCHHHHHHCCCCCCCCCCCCCCHHEEECCCCEEEECCCCHHHHHHHHHHHH REVPVSHLKALFLSHQDPDIGSSLPLWRRVCEPDIKIYLSWLWSSFTAHFDREATFTTIP HHCCHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECC DEGMEISLTPDLRLRFVPAHYLHSSGNFNVYDPKAKVLFSGDIGAALIPKDKASGSMFVA CCCCEEEECCCCEEEEEEHHHEECCCCEEEECCCEEEEEECCCCEEECCCCCCCCCEEHH DFASHVQYMEAFHRRWLGSAQARDAWCAQVSKLDIDFLAPQHGLVFKGDDVKRFIDWFAG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEECCCCCEEEECCHHHHHHHHHHC FEIGSGVAAMKR CCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA