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The map label for this gene is ymfK [C]

Identifier: 83313328

GI number: 83313328

Start: 4638972

End: 4639643

Strand: Reverse

Name: ymfK [C]

Synonym: amb4229

Alternate gene names: 83313328

Gene position: 4639643-4638972 (Counterclockwise)

Preceding gene: 83313335

Following gene: 83313327

Centisome position: 93.41

GC content: 66.82

Gene sequence:

>672_bases
GTGGAACCCGGGGCCGAATTGCGGGACCATCTTCCCATGCTGAAGCACGCCGACATTTGGGCCGCCATTGATGCGCTTGC
CCGTGACCACGGGCTGACGGCGTCTGCCCTTGCGCGGAAGGCGGGGCTCGATCCCACCACCTTCAACAAGAGCAAGCGCA
TCACCCGCGAAGGCAAGCCCCGCTGGCCGTCGACGGAAAGCGTCGCCAAGGTCCTGGAGGCGACAGGCGCCAGCATGACC
GCCTTCGTCGCCTATATCGAGGACCTGGCCCAGCCCCACAATCAGGCCAGCACCATTCCGCTGGTCGGCTTTGCCCAGGC
GGGCGACCGCGGCTATTTCGACGATGCCGGCTATCCCGTGGGCGGCAGTTGGGATGAAATCCCCTTCCCCGAAATCGGCG
ACCCCCATGCCTATGCGCTGGAGGTCAGCGGCGATTCCATGGAACCCCTTTACCGCGATGGCGATGTGGTCATCGTCTCG
CCGGCCGCCGGGGTGCGGCGTGGCGACCGAGTGGTGGTCCGCACCACCGAGGGCGAGGTCATGGTCAAGCAGTTGCTGCG
CCAGACCGCCAGGCGCATCGAGTTGGGCTCCATCAATCCCGCCCATCCCGGGCGCTCCCTCGCCACCGAGGAGGTGGCCT
GGATGGCCCGCATCCTGTGGTCAAGCCAGTAG

Upstream 100 bases:

>100_bases
TTCCGTTTTAAAGCCATTTAAGTTCTCCGATGCTAGGATCGTATGCCGATAGTTGTCCCGCATATGGCCGAATAGAGTCA
ATAAAAAGGTTTATGTTCCT

Downstream 100 bases:

>100_bases
CGCTTGCAAATCAGTTCCCGTTGTGTTCTCTTCGTTCTCCATCGTGCCGAGGAGAACGGAATGCCTGTCCGCTTTGCCTT
TCGGCGGATGGACGCGGCCG

Product: transcriptional regulator

Products: NA

Alternate protein names: Peptidase; Transcriptional Regulator; Bacteriophage Repressor; Peptidase Family S; S24 Family Peptidase; Transcriptional Regulator Protein; Phage-Related Transcriptional Regulator Protein; LexA-Like Transcriptional Repressor; Peptidase Family; Transcription Regulator Protein; Phage-Related Transcriptional Regulator; Peptidase S

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MEPGAELRDHLPMLKHADIWAAIDALARDHGLTASALARKAGLDPTTFNKSKRITREGKPRWPSTESVAKVLEATGASMT
AFVAYIEDLAQPHNQASTIPLVGFAQAGDRGYFDDAGYPVGGSWDEIPFPEIGDPHAYALEVSGDSMEPLYRDGDVVIVS
PAAGVRRGDRVVVRTTEGEVMVKQLLRQTARRIELGSINPAHPGRSLATEEVAWMARILWSSQ

Sequences:

>Translated_223_residues
MEPGAELRDHLPMLKHADIWAAIDALARDHGLTASALARKAGLDPTTFNKSKRITREGKPRWPSTESVAKVLEATGASMT
AFVAYIEDLAQPHNQASTIPLVGFAQAGDRGYFDDAGYPVGGSWDEIPFPEIGDPHAYALEVSGDSMEPLYRDGDVVIVS
PAAGVRRGDRVVVRTTEGEVMVKQLLRQTARRIELGSINPAHPGRSLATEEVAWMARILWSSQ
>Mature_223_residues
MEPGAELRDHLPMLKHADIWAAIDALARDHGLTASALARKAGLDPTTFNKSKRITREGKPRWPSTESVAKVLEATGASMT
AFVAYIEDLAQPHNQASTIPLVGFAQAGDRGYFDDAGYPVGGSWDEIPFPEIGDPHAYALEVSGDSMEPLYRDGDVVIVS
PAAGVRRGDRVVVRTTEGEVMVKQLLRQTARRIELGSINPAHPGRSLATEEVAWMARILWSSQ

Specific function: Unknown

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24227; Mature: 24227

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPGAELRDHLPMLKHADIWAAIDALARDHGLTASALARKAGLDPTTFNKSKRITREGKP
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCC
RWPSTESVAKVLEATGASMTAFVAYIEDLAQPHNQASTIPLVGFAQAGDRGYFDDAGYPV
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
GGSWDEIPFPEIGDPHAYALEVSGDSMEPLYRDGDVVIVSPAAGVRRGDRVVVRTTEGEV
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCHH
MVKQLLRQTARRIELGSINPAHPGRSLATEEVAWMARILWSSQ
HHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEPGAELRDHLPMLKHADIWAAIDALARDHGLTASALARKAGLDPTTFNKSKRITREGKP
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCC
RWPSTESVAKVLEATGASMTAFVAYIEDLAQPHNQASTIPLVGFAQAGDRGYFDDAGYPV
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
GGSWDEIPFPEIGDPHAYALEVSGDSMEPLYRDGDVVIVSPAAGVRRGDRVVVRTTEGEV
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCHH
MVKQLLRQTARRIELGSINPAHPGRSLATEEVAWMARILWSSQ
HHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA