| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83313316
Identifier: 83313316
GI number: 83313316
Start: 4629500
End: 4630117
Strand: Reverse
Name: 83313316
Synonym: amb4217
Alternate gene names: NA
Gene position: 4630117-4629500 (Counterclockwise)
Preceding gene: 83313319
Following gene: 83313311
Centisome position: 93.21
GC content: 65.86
Gene sequence:
>618_bases ATGGGGGAGGACAAAATGAAGGCATGGGCAGGGCTTGCCGCCGTGGGACTTTTGGTCGCGTCCGGCGCCATCGCTGCTCC GCAATCGGTGGAGTACAAGGGGCGGAAAATCCAGGCGGAGGCGGGTGACCAGGCCGGCGAATGCGTCGCCCTGGTGCGCA AGGCCATCGACATGACGGCGGAGCTGGCGCCGAAGCAGCGCGCTCTGGCCGCCGAGGTCAAGGATTTGCGCTGTCTGCCC GTTCCCGAGGGCAAGCGGACCAACGAGGTCGCCGACAACACCATCGGAATCTACACCATGCAATCGCCGGACACCCCCGG CGGATACATCCGCTTCCCCTTGAAGCCCGGGAACCTGTCCGCCGCCGAGGTGGTCATGTCGCTGGTGGGCAACGGCCAGT ATGCCAAATGGCACCAGGCCTATCTGGCGGCCAAGCGGCAGGGCGACCCATCGGCCGGGCGGTACCATGCCCTCCTGACC AAGTCGGACCAGAAGGTCCTGATCGCCGCTGAATGCGAATTGCTCGACCACCGGCGGGCGGCGGCCAAATCCCTTGATCT CGGGGAACGGCGGATCGCCTCCATCAACCGGCAGAGTTCACTGCGCGGTTGTCCCTGA
Upstream 100 bases:
>100_bases TGGGTAGATCGTGCGGTTGCATTGATCCCTCATTCGCCGATCCGCATCATTGCGGCCATTCGCCTTGCCCCCCCGGGGGG GAAGAGAGCCAGGCGAAACC
Downstream 100 bases:
>100_bases GTGCCGGGGGCTACTTCTTGGACTTGCCCCGGGGCATGCGCGATTCCATCAGGGCGAAGAGCTTGGTGTCGAACAGCCAG ATCATGACGCCCTCTTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MGEDKMKAWAGLAAVGLLVASGAIAAPQSVEYKGRKIQAEAGDQAGECVALVRKAIDMTAELAPKQRALAAEVKDLRCLP VPEGKRTNEVADNTIGIYTMQSPDTPGGYIRFPLKPGNLSAAEVVMSLVGNGQYAKWHQAYLAAKRQGDPSAGRYHALLT KSDQKVLIAAECELLDHRRAAAKSLDLGERRIASINRQSSLRGCP
Sequences:
>Translated_205_residues MGEDKMKAWAGLAAVGLLVASGAIAAPQSVEYKGRKIQAEAGDQAGECVALVRKAIDMTAELAPKQRALAAEVKDLRCLP VPEGKRTNEVADNTIGIYTMQSPDTPGGYIRFPLKPGNLSAAEVVMSLVGNGQYAKWHQAYLAAKRQGDPSAGRYHALLT KSDQKVLIAAECELLDHRRAAAKSLDLGERRIASINRQSSLRGCP >Mature_204_residues GEDKMKAWAGLAAVGLLVASGAIAAPQSVEYKGRKIQAEAGDQAGECVALVRKAIDMTAELAPKQRALAAEVKDLRCLPV PEGKRTNEVADNTIGIYTMQSPDTPGGYIRFPLKPGNLSAAEVVMSLVGNGQYAKWHQAYLAAKRQGDPSAGRYHALLTK SDQKVLIAAECELLDHRRAAAKSLDLGERRIASINRQSSLRGCP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21909; Mature: 21778
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEDKMKAWAGLAAVGLLVASGAIAAPQSVEYKGRKIQAEAGDQAGECVALVRKAIDMTA CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHH ELAPKQRALAAEVKDLRCLPVPEGKRTNEVADNTIGIYTMQSPDTPGGYIRFPLKPGNLS HHCCHHHHHHHHHHHCEECCCCCCCCCCHHCCCCEEEEEECCCCCCCCEEEEECCCCCCC AAEVVMSLVGNGQYAKWHQAYLAAKRQGDPSAGRYHALLTKSDQKVLIAAECELLDHRRA HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHH AAKSLDLGERRIASINRQSSLRGCP HHHHCCCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure GEDKMKAWAGLAAVGLLVASGAIAAPQSVEYKGRKIQAEAGDQAGECVALVRKAIDMTA CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHH ELAPKQRALAAEVKDLRCLPVPEGKRTNEVADNTIGIYTMQSPDTPGGYIRFPLKPGNLS HHCCHHHHHHHHHHHCEECCCCCCCCCCHHCCCCEEEEEECCCCCCCCEEEEECCCCCCC AAEVVMSLVGNGQYAKWHQAYLAAKRQGDPSAGRYHALLTKSDQKVLIAAECELLDHRRA HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHH AAKSLDLGERRIASINRQSSLRGCP HHHHCCCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA