| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83313293
Identifier: 83313293
GI number: 83313293
Start: 4608720
End: 4609610
Strand: Reverse
Name: 83313293
Synonym: amb4194
Alternate gene names: NA
Gene position: 4609610-4608720 (Counterclockwise)
Preceding gene: 83313308
Following gene: 83313291
Centisome position: 92.8
GC content: 66.78
Gene sequence:
>891_bases ATGGACAGCAGGTCGCGCAGCACCCACAGCAAGGGGGTGTCGGGCGCGGCGTCCACCTTGTGCCGTTCACCGTTGATGAT CAGGGAGAACATCCGCTCAGCGTCCTTCCGTTTGGAAGCGTTACAGGCTTACCCTCAAAGGGCATGGCAGGCAAGGGTTA ACAAAATCCTAACCACGCTCGTGGTTGGAGTGGAGCGACCACAGTTTTCCACGGAGGCCTCCATGTCCAGACTGATCGCC CTGGCCCTTGCGGTTCTGTTTCTCGCCGGCGGCGCCAAGGCCCAGCAGGTCACCGATCAGACCATGATGGTGGGCAAGGC GGTCACCGTGGTGGAGCGCCTGCGGGCCGATCCCAATTTCAGTGGGCAGATGGCCAATCTGCTGGGGCGGGCGCGGGCGG TGCTGGTGGTGCCCGATCTGGTCAAGGGCGGGTTCATCCTGGGGGCGCAATACGGCACCGGCGTGCTGCTGGCCCGCGAC GGGTCGGGACGCTGGAGCGGTCCGGCCTTCTACTCCATCGCGGCGGGCAGCGTCGGGCTGCAGATCGGCCTGCAGGATGC CGAGGCGGTCTATGTCATCATGAGCGAGGGTGGCCTCAAGGCCGTGGTGGAGAACCAGTTCAAGGCCGGCGCCGAGGCCG GCGTGGCGGTGGCGGTGGTCGGCGCCGGCGCCTCGGCCAACACCACCACCAATGTGGGGGCGGATATCTATGCCTTCTCC CGCGCCGTGGGGCTTTACGGCGGCGCCACCCTGGACGGCGCCGGCATCCTGCCCCGTCATTCGTGGAACGCCGCCTATTA CGGCGGCAATCCGACGCCCGAGGACATCCTGTTCAGCCGCAGCGTGGATTCCCGCCAAGCCGACCGGCTGCGGGACATCC TGTCCCGCTAG
Upstream 100 bases:
>100_bases CTCGGAGACGGGGGTCTGGCAGGCCCGGGTCGGCTCGCCGTCCACCAGGATGGAGCAGGCACCGCACAGGCCCTGGCCGC AGCCGTAGCGGATGGAGGTC
Downstream 100 bases:
>100_bases ATCATGTCAGTCCCTCGCCGGGCGCGGGCTTCCGCCCGCTTGGCCGCGGCCTCAATGGCCGCTATTAGGTGCCTATTTCA TCACCCGCGAGAACCCTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MDSRSRSTHSKGVSGAASTLCRSPLMIRENIRSASFRLEALQAYPQRAWQARVNKILTTLVVGVERPQFSTEASMSRLIA LALAVLFLAGGAKAQQVTDQTMMVGKAVTVVERLRADPNFSGQMANLLGRARAVLVVPDLVKGGFILGAQYGTGVLLARD GSGRWSGPAFYSIAAGSVGLQIGLQDAEAVYVIMSEGGLKAVVENQFKAGAEAGVAVAVVGAGASANTTTNVGADIYAFS RAVGLYGGATLDGAGILPRHSWNAAYYGGNPTPEDILFSRSVDSRQADRLRDILSR
Sequences:
>Translated_296_residues MDSRSRSTHSKGVSGAASTLCRSPLMIRENIRSASFRLEALQAYPQRAWQARVNKILTTLVVGVERPQFSTEASMSRLIA LALAVLFLAGGAKAQQVTDQTMMVGKAVTVVERLRADPNFSGQMANLLGRARAVLVVPDLVKGGFILGAQYGTGVLLARD GSGRWSGPAFYSIAAGSVGLQIGLQDAEAVYVIMSEGGLKAVVENQFKAGAEAGVAVAVVGAGASANTTTNVGADIYAFS RAVGLYGGATLDGAGILPRHSWNAAYYGGNPTPEDILFSRSVDSRQADRLRDILSR >Mature_296_residues MDSRSRSTHSKGVSGAASTLCRSPLMIRENIRSASFRLEALQAYPQRAWQARVNKILTTLVVGVERPQFSTEASMSRLIA LALAVLFLAGGAKAQQVTDQTMMVGKAVTVVERLRADPNFSGQMANLLGRARAVLVVPDLVKGGFILGAQYGTGVLLARD GSGRWSGPAFYSIAAGSVGLQIGLQDAEAVYVIMSEGGLKAVVENQFKAGAEAGVAVAVVGAGASANTTTNVGADIYAFS RAVGLYGGATLDGAGILPRHSWNAAYYGGNPTPEDILFSRSVDSRQADRLRDILSR
Specific function: Unknown
COG id: COG2930
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI227430338, Length=171, Percent_Identity=26.3157894736842, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI227430336, Length=171, Percent_Identity=26.3157894736842, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31065; Mature: 31065
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSRSRSTHSKGVSGAASTLCRSPLMIRENIRSASFRLEALQAYPQRAWQARVNKILTTL CCCCCCCCHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGVERPQFSTEASMSRLIALALAVLFLAGGAKAQQVTDQTMMVGKAVTVVERLRADPNF HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC SGQMANLLGRARAVLVVPDLVKGGFILGAQYGTGVLLARDGSGRWSGPAFYSIAAGSVGL CHHHHHHHHHCEEEEEECCHHCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCEEE QIGLQDAEAVYVIMSEGGLKAVVENQFKAGAEAGVAVAVVGAGASANTTTNVGADIYAFS EEECCCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH RAVGLYGGATLDGAGILPRHSWNAAYYGGNPTPEDILFSRSVDSRQADRLRDILSR HHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure MDSRSRSTHSKGVSGAASTLCRSPLMIRENIRSASFRLEALQAYPQRAWQARVNKILTTL CCCCCCCCHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGVERPQFSTEASMSRLIALALAVLFLAGGAKAQQVTDQTMMVGKAVTVVERLRADPNF HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC SGQMANLLGRARAVLVVPDLVKGGFILGAQYGTGVLLARDGSGRWSGPAFYSIAAGSVGL CHHHHHHHHHCEEEEEECCHHCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCEEE QIGLQDAEAVYVIMSEGGLKAVVENQFKAGAEAGVAVAVVGAGASANTTTNVGADIYAFS EEECCCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH RAVGLYGGATLDGAGILPRHSWNAAYYGGNPTPEDILFSRSVDSRQADRLRDILSR HHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA