Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83313293

Identifier: 83313293

GI number: 83313293

Start: 4608720

End: 4609610

Strand: Reverse

Name: 83313293

Synonym: amb4194

Alternate gene names: NA

Gene position: 4609610-4608720 (Counterclockwise)

Preceding gene: 83313308

Following gene: 83313291

Centisome position: 92.8

GC content: 66.78

Gene sequence:

>891_bases
ATGGACAGCAGGTCGCGCAGCACCCACAGCAAGGGGGTGTCGGGCGCGGCGTCCACCTTGTGCCGTTCACCGTTGATGAT
CAGGGAGAACATCCGCTCAGCGTCCTTCCGTTTGGAAGCGTTACAGGCTTACCCTCAAAGGGCATGGCAGGCAAGGGTTA
ACAAAATCCTAACCACGCTCGTGGTTGGAGTGGAGCGACCACAGTTTTCCACGGAGGCCTCCATGTCCAGACTGATCGCC
CTGGCCCTTGCGGTTCTGTTTCTCGCCGGCGGCGCCAAGGCCCAGCAGGTCACCGATCAGACCATGATGGTGGGCAAGGC
GGTCACCGTGGTGGAGCGCCTGCGGGCCGATCCCAATTTCAGTGGGCAGATGGCCAATCTGCTGGGGCGGGCGCGGGCGG
TGCTGGTGGTGCCCGATCTGGTCAAGGGCGGGTTCATCCTGGGGGCGCAATACGGCACCGGCGTGCTGCTGGCCCGCGAC
GGGTCGGGACGCTGGAGCGGTCCGGCCTTCTACTCCATCGCGGCGGGCAGCGTCGGGCTGCAGATCGGCCTGCAGGATGC
CGAGGCGGTCTATGTCATCATGAGCGAGGGTGGCCTCAAGGCCGTGGTGGAGAACCAGTTCAAGGCCGGCGCCGAGGCCG
GCGTGGCGGTGGCGGTGGTCGGCGCCGGCGCCTCGGCCAACACCACCACCAATGTGGGGGCGGATATCTATGCCTTCTCC
CGCGCCGTGGGGCTTTACGGCGGCGCCACCCTGGACGGCGCCGGCATCCTGCCCCGTCATTCGTGGAACGCCGCCTATTA
CGGCGGCAATCCGACGCCCGAGGACATCCTGTTCAGCCGCAGCGTGGATTCCCGCCAAGCCGACCGGCTGCGGGACATCC
TGTCCCGCTAG

Upstream 100 bases:

>100_bases
CTCGGAGACGGGGGTCTGGCAGGCCCGGGTCGGCTCGCCGTCCACCAGGATGGAGCAGGCACCGCACAGGCCCTGGCCGC
AGCCGTAGCGGATGGAGGTC

Downstream 100 bases:

>100_bases
ATCATGTCAGTCCCTCGCCGGGCGCGGGCTTCCGCCCGCTTGGCCGCGGCCTCAATGGCCGCTATTAGGTGCCTATTTCA
TCACCCGCGAGAACCCTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MDSRSRSTHSKGVSGAASTLCRSPLMIRENIRSASFRLEALQAYPQRAWQARVNKILTTLVVGVERPQFSTEASMSRLIA
LALAVLFLAGGAKAQQVTDQTMMVGKAVTVVERLRADPNFSGQMANLLGRARAVLVVPDLVKGGFILGAQYGTGVLLARD
GSGRWSGPAFYSIAAGSVGLQIGLQDAEAVYVIMSEGGLKAVVENQFKAGAEAGVAVAVVGAGASANTTTNVGADIYAFS
RAVGLYGGATLDGAGILPRHSWNAAYYGGNPTPEDILFSRSVDSRQADRLRDILSR

Sequences:

>Translated_296_residues
MDSRSRSTHSKGVSGAASTLCRSPLMIRENIRSASFRLEALQAYPQRAWQARVNKILTTLVVGVERPQFSTEASMSRLIA
LALAVLFLAGGAKAQQVTDQTMMVGKAVTVVERLRADPNFSGQMANLLGRARAVLVVPDLVKGGFILGAQYGTGVLLARD
GSGRWSGPAFYSIAAGSVGLQIGLQDAEAVYVIMSEGGLKAVVENQFKAGAEAGVAVAVVGAGASANTTTNVGADIYAFS
RAVGLYGGATLDGAGILPRHSWNAAYYGGNPTPEDILFSRSVDSRQADRLRDILSR
>Mature_296_residues
MDSRSRSTHSKGVSGAASTLCRSPLMIRENIRSASFRLEALQAYPQRAWQARVNKILTTLVVGVERPQFSTEASMSRLIA
LALAVLFLAGGAKAQQVTDQTMMVGKAVTVVERLRADPNFSGQMANLLGRARAVLVVPDLVKGGFILGAQYGTGVLLARD
GSGRWSGPAFYSIAAGSVGLQIGLQDAEAVYVIMSEGGLKAVVENQFKAGAEAGVAVAVVGAGASANTTTNVGADIYAFS
RAVGLYGGATLDGAGILPRHSWNAAYYGGNPTPEDILFSRSVDSRQADRLRDILSR

Specific function: Unknown

COG id: COG2930

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI227430338, Length=171, Percent_Identity=26.3157894736842, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI227430336, Length=171, Percent_Identity=26.3157894736842, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31065; Mature: 31065

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSRSRSTHSKGVSGAASTLCRSPLMIRENIRSASFRLEALQAYPQRAWQARVNKILTTL
CCCCCCCCHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVGVERPQFSTEASMSRLIALALAVLFLAGGAKAQQVTDQTMMVGKAVTVVERLRADPNF
HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SGQMANLLGRARAVLVVPDLVKGGFILGAQYGTGVLLARDGSGRWSGPAFYSIAAGSVGL
CHHHHHHHHHCEEEEEECCHHCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCEEE
QIGLQDAEAVYVIMSEGGLKAVVENQFKAGAEAGVAVAVVGAGASANTTTNVGADIYAFS
EEECCCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH
RAVGLYGGATLDGAGILPRHSWNAAYYGGNPTPEDILFSRSVDSRQADRLRDILSR
HHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MDSRSRSTHSKGVSGAASTLCRSPLMIRENIRSASFRLEALQAYPQRAWQARVNKILTTL
CCCCCCCCHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVGVERPQFSTEASMSRLIALALAVLFLAGGAKAQQVTDQTMMVGKAVTVVERLRADPNF
HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SGQMANLLGRARAVLVVPDLVKGGFILGAQYGTGVLLARDGSGRWSGPAFYSIAAGSVGL
CHHHHHHHHHCEEEEEECCHHCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCEEE
QIGLQDAEAVYVIMSEGGLKAVVENQFKAGAEAGVAVAVVGAGASANTTTNVGADIYAFS
EEECCCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH
RAVGLYGGATLDGAGILPRHSWNAAYYGGNPTPEDILFSRSVDSRQADRLRDILSR
HHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA