| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is gloB [H]
Identifier: 83313291
GI number: 83313291
Start: 4607047
End: 4607859
Strand: Reverse
Name: gloB [H]
Synonym: amb4192
Alternate gene names: 83313291
Gene position: 4607859-4607047 (Counterclockwise)
Preceding gene: 83313293
Following gene: 83313290
Centisome position: 92.77
GC content: 68.76
Gene sequence:
>813_bases TTGATGCTACATTCGGCCTATCGCTGCGGGTGGATGTCCATGGCCAAGATCATCGTCGAGCAGATTCCGGTATTGTCCGA CAATTACGTCTATCTGGCGCACGAGCCCCTGGGCGGGGCCACGGCCGCCATCGATCCGGCGGTGTCCGAGCCGGTGCTGG AACGTCTGGCCGCCCGGGGCTGGACGCTGACCCATATCCTCAACACCCATCATCACGGCGACCACACCGGGGCCAATCTG GATCTGGCGCGGCGCACGGGCTGCGCCGTGGTCGGAGCGGCCCGCGATTCCGAGCGCATCCCCGGCATCACCCTGGAGGT GTCCGAGGGCGAGACCTTCATGCTGGGCCATGCCGCCGTCACCGTCCTCGAGGTTCCAGGCCATACCTCGGGGCATGTGG CCTACTGGCTGGCCGACAGCCATGTGCTGTTTTGCGGCGACACGCTGTTCTCGCTGGGCTGCGGTCGGCTGTTCGAGGGC ACGGCCGAGGAGATGTGGGCCTCGCTGAAGAAGCTGCGCGACCTGCCGCCGGACACGCTGGCCTATCCCGCCCACGAATA TACCGCCGGCAACGGCCGCTTCGCCCGGCTGGTGGAGCGCGACAACGGGGCGCTGAAGGCCCGGCTGGACGAGGTGGAGC GCCTGCGCGCCCACAACCGTCCCACCGTGCCGGTGCGGCTGGCCGACGAGCGTGCCGCCAATCCCTTCCTGCGGGCCGAC ACCGCCGCGATCGCCCGGGCGGTGGGGCTGGAGCCGGGAACCGATCCCGCTTTGGTCTTCGCCGAATTGCGGCGGCGCAA GGACGTGTTCTGA
Upstream 100 bases:
>100_bases AGGCTGCTGCCGTAAAAATCGCGCAGATCGACCACATCGGTCCACATGGCGGGATAGGACAGGTCTCGATTCATGGCGCA AGGATAGGCGTTTCGGCCGC
Downstream 100 bases:
>100_bases CCGGAAAGCCGGGGCCGACCGGCCCCTTTGTGAACAACAGGGAGTGAGCCATGGGGCACGGCCGTGTTCTATTCGTCGAC GACGAGCCCAGGGTGCTCGA
Product: Zn-dependent hydrolase, including glyoxylase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MMLHSAYRCGWMSMAKIIVEQIPVLSDNYVYLAHEPLGGATAAIDPAVSEPVLERLAARGWTLTHILNTHHHGDHTGANL DLARRTGCAVVGAARDSERIPGITLEVSEGETFMLGHAAVTVLEVPGHTSGHVAYWLADSHVLFCGDTLFSLGCGRLFEG TAEEMWASLKKLRDLPPDTLAYPAHEYTAGNGRFARLVERDNGALKARLDEVERLRAHNRPTVPVRLADERAANPFLRAD TAAIARAVGLEPGTDPALVFAELRRRKDVF
Sequences:
>Translated_270_residues MMLHSAYRCGWMSMAKIIVEQIPVLSDNYVYLAHEPLGGATAAIDPAVSEPVLERLAARGWTLTHILNTHHHGDHTGANL DLARRTGCAVVGAARDSERIPGITLEVSEGETFMLGHAAVTVLEVPGHTSGHVAYWLADSHVLFCGDTLFSLGCGRLFEG TAEEMWASLKKLRDLPPDTLAYPAHEYTAGNGRFARLVERDNGALKARLDEVERLRAHNRPTVPVRLADERAANPFLRAD TAAIARAVGLEPGTDPALVFAELRRRKDVF >Mature_270_residues MMLHSAYRCGWMSMAKIIVEQIPVLSDNYVYLAHEPLGGATAAIDPAVSEPVLERLAARGWTLTHILNTHHHGDHTGANL DLARRTGCAVVGAARDSERIPGITLEVSEGETFMLGHAAVTVLEVPGHTSGHVAYWLADSHVLFCGDTLFSLGCGRLFEG TAEEMWASLKKLRDLPPDTLAYPAHEYTAGNGRFARLVERDNGALKARLDEVERLRAHNRPTVPVRLADERAANPFLRAD TAAIARAVGLEPGTDPALVFAELRRRKDVF
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538320, Length=259, Percent_Identity=38.6100386100386, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI94538322, Length=259, Percent_Identity=38.6100386100386, Blast_Score=169, Evalue=3e-42, Organism=Homo sapiens, GI116642887, Length=265, Percent_Identity=40, Blast_Score=169, Evalue=3e-42, Organism=Homo sapiens, GI21703352, Length=265, Percent_Identity=40, Blast_Score=169, Evalue=3e-42, Organism=Homo sapiens, GI14150041, Length=237, Percent_Identity=41.7721518987342, Blast_Score=166, Evalue=2e-41, Organism=Homo sapiens, GI46361987, Length=198, Percent_Identity=43.4343434343434, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI41327741, Length=185, Percent_Identity=34.0540540540541, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI1786406, Length=254, Percent_Identity=41.7322834645669, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI1787158, Length=166, Percent_Identity=31.3253012048193, Blast_Score=72, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17536925, Length=264, Percent_Identity=35.2272727272727, Blast_Score=138, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6324614, Length=261, Percent_Identity=34.4827586206897, Blast_Score=124, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6320478, Length=261, Percent_Identity=32.5670498084291, Blast_Score=124, Evalue=2e-29, Organism=Drosophila melanogaster, GI21356335, Length=260, Percent_Identity=37.3076923076923, Blast_Score=175, Evalue=3e-44, Organism=Drosophila melanogaster, GI24667711, Length=260, Percent_Identity=37.3076923076923, Blast_Score=174, Evalue=4e-44, Organism=Drosophila melanogaster, GI24667703, Length=260, Percent_Identity=37.3076923076923, Blast_Score=174, Evalue=7e-44, Organism=Drosophila melanogaster, GI221330176, Length=214, Percent_Identity=28.0373831775701, Blast_Score=84, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001018 - InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 29472; Mature: 29472
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLHSAYRCGWMSMAKIIVEQIPVLSDNYVYLAHEPLGGATAAIDPAVSEPVLERLAARG CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHCCCHHHHHHHHHHHHCC WTLTHILNTHHHGDHTGANLDLARRTGCAVVGAARDSERIPGITLEVSEGETFMLGHAAV CEEEEHHHCCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCEEEEECCCCEEEEEEEEE TVLEVPGHTSGHVAYWLADSHVLFCGDTLFSLGCGRLFEGTAEEMWASLKKLRDLPPDTL EEEECCCCCCCEEEEEEECCEEEEECHHHHHHCCCHHHCCCHHHHHHHHHHHHCCCCCHH AYPAHEYTAGNGRFARLVERDNGALKARLDEVERLRAHNRPTVPVRLADERAANPFLRAD CCCCHHEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHH TAAIARAVGLEPGTDPALVFAELRRRKDVF HHHHHHHHCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MMLHSAYRCGWMSMAKIIVEQIPVLSDNYVYLAHEPLGGATAAIDPAVSEPVLERLAARG CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHCCCHHHHHHHHHHHHCC WTLTHILNTHHHGDHTGANLDLARRTGCAVVGAARDSERIPGITLEVSEGETFMLGHAAV CEEEEHHHCCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCEEEEECCCCEEEEEEEEE TVLEVPGHTSGHVAYWLADSHVLFCGDTLFSLGCGRLFEGTAEEMWASLKKLRDLPPDTL EEEECCCCCCCEEEEEEECCEEEEECHHHHHHCCCHHHCCCHHHHHHHHHHHHCCCCCHH AYPAHEYTAGNGRFARLVERDNGALKARLDEVERLRAHNRPTVPVRLADERAANPFLRAD CCCCHHEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHH TAAIARAVGLEPGTDPALVFAELRRRKDVF HHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA