| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is rcsB [C]
Identifier: 83313290
GI number: 83313290
Start: 4606523
End: 4606996
Strand: Reverse
Name: rcsB [C]
Synonym: amb4191
Alternate gene names: 83313290
Gene position: 4606996-4606523 (Counterclockwise)
Preceding gene: 83313291
Following gene: 83313288
Centisome position: 92.75
GC content: 68.57
Gene sequence:
>474_bases ATGGGGCACGGCCGTGTTCTATTCGTCGACGACGAGCCCAGGGTGCTCGAAGGTATCCGGCGGACCATGCTGGAGTATGG CGACGAGTGGGTCAGCCTGTTCGCCACCAGCGCTCTTCAGGCCCTGGACATCATGGCCGCCGAGCCCGTCCATGTGGTGG TCACCGACATCGCCATGCCGGTCATGGACGGCAAGGCGCTGATCGCCGAGATGTACGAGGCCTATCCCGACGTGGTGGTG CTGGTCCTGTCGGGTCATTGGACGCCCGCCGTCTCGCACCAGCAGGTGGGGCCGGCGGTGCGGTTCCAGGGCAAGCCGGT CTCGCCCGAGCAATTGACCGCCGCCATTCGCGACGCCCTGGGCGAGGCGGTGCTGCCCGCCCTGGGCGAGCCGGCCGCCA AGCCCAGTCTGGTTTCGCCCGCCCACCGCGTCGGCCATGACCCCAGCTGGGTCGACTTGGGCGACGACGAATAG
Upstream 100 bases:
>100_bases ATCCCGCTTTGGTCTTCGCCGAATTGCGGCGGCGCAAGGACGTGTTCTGACCGGAAAGCCGGGGCCGACCGGCCCCTTTG TGAACAACAGGGAGTGAGCC
Downstream 100 bases:
>100_bases GGGGTAAACGGAAAGCTTACTTTTCCGGCCCGGCGAAGATGGTCCTGGTGCGCACCTCGCGGCTGGAGCCGTCGAGGACG AAGGTGACCGGCATGCTCTT
Product: response regulator
Products: NA
Alternate protein names: Response Regulator; Signal Transduction Protein; Response Regulator Receiver Domain-Containing Protein; Multi-Sensor Hybrid Histidine Kinase; Two Component; PAS/PAC Sensor Hybrid Histidine Kinase; CheY-Like Receiver; CheY-Like Response Regulator; Two-Component System Response Regulator; Metal-Dependent Hydrolase HDOD; PAS/PAC Sensor Protein; HDOD Domain Family; Complex Sensory Protein
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MGHGRVLFVDDEPRVLEGIRRTMLEYGDEWVSLFATSALQALDIMAAEPVHVVVTDIAMPVMDGKALIAEMYEAYPDVVV LVLSGHWTPAVSHQQVGPAVRFQGKPVSPEQLTAAIRDALGEAVLPALGEPAAKPSLVSPAHRVGHDPSWVDLGDDE
Sequences:
>Translated_157_residues MGHGRVLFVDDEPRVLEGIRRTMLEYGDEWVSLFATSALQALDIMAAEPVHVVVTDIAMPVMDGKALIAEMYEAYPDVVV LVLSGHWTPAVSHQQVGPAVRFQGKPVSPEQLTAAIRDALGEAVLPALGEPAAKPSLVSPAHRVGHDPSWVDLGDDE >Mature_156_residues GHGRVLFVDDEPRVLEGIRRTMLEYGDEWVSLFATSALQALDIMAAEPVHVVVTDIAMPVMDGKALIAEMYEAYPDVVVL VLSGHWTPAVSHQQVGPAVRFQGKPVSPEQLTAAIRDALGEAVLPALGEPAAKPSLVSPAHRVGHDPSWVDLGDDE
Specific function: Rcsb Is A Member Of The Two-Component Regulatory System Rcsb/Rcsc, Which Regulates The Expression Of Genes Involved In Colanic Acid Capsule Synthesis. Rcsb Acts As The Effector. Additional Control Is Provided By The Dependence On The Alternate Sigma Facto
COG id: COG4753
COG function: function code T; Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16882; Mature: 16751
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHGRVLFVDDEPRVLEGIRRTMLEYGDEWVSLFATSALQALDIMAAEPVHVVVTDIAMP CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHH VMDGKALIAEMYEAYPDVVVLVLSGHWTPAVSHQQVGPAVRFQGKPVSPEQLTAAIRDAL HCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHCCCCEEECCCCCCHHHHHHHHHHHH GEAVLPALGEPAAKPSLVSPAHRVGHDPSWVDLGDDE HHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC >Mature Secondary Structure GHGRVLFVDDEPRVLEGIRRTMLEYGDEWVSLFATSALQALDIMAAEPVHVVVTDIAMP CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHH VMDGKALIAEMYEAYPDVVVLVLSGHWTPAVSHQQVGPAVRFQGKPVSPEQLTAAIRDAL HCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHCCCCEEECCCCCCHHHHHHHHHHHH GEAVLPALGEPAAKPSLVSPAHRVGHDPSWVDLGDDE HHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA