Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is rcsB [C]

Identifier: 83313290

GI number: 83313290

Start: 4606523

End: 4606996

Strand: Reverse

Name: rcsB [C]

Synonym: amb4191

Alternate gene names: 83313290

Gene position: 4606996-4606523 (Counterclockwise)

Preceding gene: 83313291

Following gene: 83313288

Centisome position: 92.75

GC content: 68.57

Gene sequence:

>474_bases
ATGGGGCACGGCCGTGTTCTATTCGTCGACGACGAGCCCAGGGTGCTCGAAGGTATCCGGCGGACCATGCTGGAGTATGG
CGACGAGTGGGTCAGCCTGTTCGCCACCAGCGCTCTTCAGGCCCTGGACATCATGGCCGCCGAGCCCGTCCATGTGGTGG
TCACCGACATCGCCATGCCGGTCATGGACGGCAAGGCGCTGATCGCCGAGATGTACGAGGCCTATCCCGACGTGGTGGTG
CTGGTCCTGTCGGGTCATTGGACGCCCGCCGTCTCGCACCAGCAGGTGGGGCCGGCGGTGCGGTTCCAGGGCAAGCCGGT
CTCGCCCGAGCAATTGACCGCCGCCATTCGCGACGCCCTGGGCGAGGCGGTGCTGCCCGCCCTGGGCGAGCCGGCCGCCA
AGCCCAGTCTGGTTTCGCCCGCCCACCGCGTCGGCCATGACCCCAGCTGGGTCGACTTGGGCGACGACGAATAG

Upstream 100 bases:

>100_bases
ATCCCGCTTTGGTCTTCGCCGAATTGCGGCGGCGCAAGGACGTGTTCTGACCGGAAAGCCGGGGCCGACCGGCCCCTTTG
TGAACAACAGGGAGTGAGCC

Downstream 100 bases:

>100_bases
GGGGTAAACGGAAAGCTTACTTTTCCGGCCCGGCGAAGATGGTCCTGGTGCGCACCTCGCGGCTGGAGCCGTCGAGGACG
AAGGTGACCGGCATGCTCTT

Product: response regulator

Products: NA

Alternate protein names: Response Regulator; Signal Transduction Protein; Response Regulator Receiver Domain-Containing Protein; Multi-Sensor Hybrid Histidine Kinase; Two Component; PAS/PAC Sensor Hybrid Histidine Kinase; CheY-Like Receiver; CheY-Like Response Regulator; Two-Component System Response Regulator; Metal-Dependent Hydrolase HDOD; PAS/PAC Sensor Protein; HDOD Domain Family; Complex Sensory Protein

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MGHGRVLFVDDEPRVLEGIRRTMLEYGDEWVSLFATSALQALDIMAAEPVHVVVTDIAMPVMDGKALIAEMYEAYPDVVV
LVLSGHWTPAVSHQQVGPAVRFQGKPVSPEQLTAAIRDALGEAVLPALGEPAAKPSLVSPAHRVGHDPSWVDLGDDE

Sequences:

>Translated_157_residues
MGHGRVLFVDDEPRVLEGIRRTMLEYGDEWVSLFATSALQALDIMAAEPVHVVVTDIAMPVMDGKALIAEMYEAYPDVVV
LVLSGHWTPAVSHQQVGPAVRFQGKPVSPEQLTAAIRDALGEAVLPALGEPAAKPSLVSPAHRVGHDPSWVDLGDDE
>Mature_156_residues
GHGRVLFVDDEPRVLEGIRRTMLEYGDEWVSLFATSALQALDIMAAEPVHVVVTDIAMPVMDGKALIAEMYEAYPDVVVL
VLSGHWTPAVSHQQVGPAVRFQGKPVSPEQLTAAIRDALGEAVLPALGEPAAKPSLVSPAHRVGHDPSWVDLGDDE

Specific function: Rcsb Is A Member Of The Two-Component Regulatory System Rcsb/Rcsc, Which Regulates The Expression Of Genes Involved In Colanic Acid Capsule Synthesis. Rcsb Acts As The Effector. Additional Control Is Provided By The Dependence On The Alternate Sigma Facto

COG id: COG4753

COG function: function code T; Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16882; Mature: 16751

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHGRVLFVDDEPRVLEGIRRTMLEYGDEWVSLFATSALQALDIMAAEPVHVVVTDIAMP
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHH
VMDGKALIAEMYEAYPDVVVLVLSGHWTPAVSHQQVGPAVRFQGKPVSPEQLTAAIRDAL
HCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHCCCCEEECCCCCCHHHHHHHHHHHH
GEAVLPALGEPAAKPSLVSPAHRVGHDPSWVDLGDDE
HHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
GHGRVLFVDDEPRVLEGIRRTMLEYGDEWVSLFATSALQALDIMAAEPVHVVVTDIAMP
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHH
VMDGKALIAEMYEAYPDVVVLVLSGHWTPAVSHQQVGPAVRFQGKPVSPEQLTAAIRDAL
HCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHCCCCEEECCCCCCHHHHHHHHHHHH
GEAVLPALGEPAAKPSLVSPAHRVGHDPSWVDLGDDE
HHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA