| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is argK [C]
Identifier: 83313210
GI number: 83313210
Start: 4515505
End: 4516494
Strand: Reverse
Name: argK [C]
Synonym: amb4111
Alternate gene names: 83313210
Gene position: 4516494-4515505 (Counterclockwise)
Preceding gene: 83313211
Following gene: 83313209
Centisome position: 90.93
GC content: 71.52
Gene sequence:
>990_bases GTGAGCATTTCCCCCGATCCCAAGGCTCTCAGCCAGGGTGTGCTGGCCGGCGAGCGCCGTGCCCTGGCCCGTGCCATCAC CCTGATCGAATCCACCCGGCCCGACCACCGCGAGGCGGCCGAGGCGCTGATGCATGAATTGCTGCCCCATACCGGACGGT CGGTGCGCATCGGCATCACCGGCGTGCCGGGAGCGGGCAAGAGCACCTTCATCGAGAGCTTCGGCCTGCATGTGCTGGAG ATGGGCAAGAAGCCGGCGGTGCTGGCCGTCGATCCGTCTTCGCCGCGCTCGGGCGGTTCCATCCTGGGCGACAAGACCCG CATGGAGGACCTGTCCCGCGACGCCCGCGCCTTCATCCGCCCCAGCCCCTCGGGCTGCACCCTGGGCGGCGTGGCGCGCC GCACCCGCGAGGCCATGCTGGTCTGCGAGGCGGCGGGCTTCGACGTCATCGTGGTGGAAACCGTGGGCGTCGGTCAGTCC GAGACGGCGGTGGCCGACATGGTCGACATGTTCCTGCTGGTCCTGGTGCCCGGCGGCGGCGACGAGCTGCAGGGCATCAA GAAGGGCATCGTCGAGCTGGCCGACGCCATCATCGTCAACAAGGCCGACGGCGATCTGGCGGCGGCGGCGGCCCGCGCCG CCCGGGACTACAAGAACGCCCTGCACCTGCTGGCGCCGGCCTCGCCCCATTGGACCGTGCCGGTGCTGACCTGCTCGGCC CTGGCGCGGTCGGGCATCGACGAGGTGTGGTCGACCATCGCCACCTACCGCGACACCATGGACAAGGCCGGCGCCCTGGC CGACCGCCGCGCCGCCCAGGCCCATGCCTGGATGTGGAACGAGGTGTCCGAGACGCTGCTGCAGGCCCTGCGCGACGATC CCCGGGTCGAACGGATGCTGCCGGATATGGAGCGCGGCGTCGCCGGCGGGCGAATGGCCCCAGGCGCGGCCGCCAGGGCT CTGGTCCGCACCTTTCGCGGGCAAGGCTGA
Upstream 100 bases:
>100_bases CCCTGTCGGACGAGGACCGGGCCAAGCTGGTCAGCATGGCCATCCTCACCTTTCTCAACCAGGGCCAAGAGCCCGACGAC AAGAAGAGATAGCCCGCAAC
Downstream 100 bases:
>100_bases CGTTACCTAAAGTCACAGGGATGGGCCTTGGCGTATTCCTGATAAACAGGCTATCCTCTGACTTCAGTATGAAGGCGACG GAATGAACATGCGGACACCG
Product: arginine/ornithine transport system ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSISPDPKALSQGVLAGERRALARAITLIESTRPDHREAAEALMHELLPHTGRSVRIGITGVPGAGKSTFIESFGLHVLE MGKKPAVLAVDPSSPRSGGSILGDKTRMEDLSRDARAFIRPSPSGCTLGGVARRTREAMLVCEAAGFDVIVVETVGVGQS ETAVADMVDMFLLVLVPGGGDELQGIKKGIVELADAIIVNKADGDLAAAAARAARDYKNALHLLAPASPHWTVPVLTCSA LARSGIDEVWSTIATYRDTMDKAGALADRRAAQAHAWMWNEVSETLLQALRDDPRVERMLPDMERGVAGGRMAPGAAARA LVRTFRGQG
Sequences:
>Translated_329_residues MSISPDPKALSQGVLAGERRALARAITLIESTRPDHREAAEALMHELLPHTGRSVRIGITGVPGAGKSTFIESFGLHVLE MGKKPAVLAVDPSSPRSGGSILGDKTRMEDLSRDARAFIRPSPSGCTLGGVARRTREAMLVCEAAGFDVIVVETVGVGQS ETAVADMVDMFLLVLVPGGGDELQGIKKGIVELADAIIVNKADGDLAAAAARAARDYKNALHLLAPASPHWTVPVLTCSA LARSGIDEVWSTIATYRDTMDKAGALADRRAAQAHAWMWNEVSETLLQALRDDPRVERMLPDMERGVAGGRMAPGAAARA LVRTFRGQG >Mature_328_residues SISPDPKALSQGVLAGERRALARAITLIESTRPDHREAAEALMHELLPHTGRSVRIGITGVPGAGKSTFIESFGLHVLEM GKKPAVLAVDPSSPRSGGSILGDKTRMEDLSRDARAFIRPSPSGCTLGGVARRTREAMLVCEAAGFDVIVVETVGVGQSE TAVADMVDMFLLVLVPGGGDELQGIKKGIVELADAIIVNKADGDLAAAAARAARDYKNALHLLAPASPHWTVPVLTCSAL ARSGIDEVWSTIATYRDTMDKAGALADRRAAQAHAWMWNEVSETLLQALRDDPRVERMLPDMERGVAGGRMAPGAAARAL VRTFRGQG
Specific function: May have GTPase activity. May also bind and hydrolyze ATP. May function as chaperone [H]
COG id: COG1703
COG function: function code E; Putative periplasmic protein kinase ArgK and related GTPases of G3E family
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgK family [H]
Homologues:
Organism=Homo sapiens, GI26892295, Length=329, Percent_Identity=49.8480243161094, Blast_Score=315, Evalue=3e-86, Organism=Escherichia coli, GI1789285, Length=312, Percent_Identity=47.7564102564103, Blast_Score=299, Evalue=1e-82, Organism=Caenorhabditis elegans, GI71994271, Length=334, Percent_Identity=42.5149700598802, Blast_Score=288, Evalue=3e-78, Organism=Caenorhabditis elegans, GI71994275, Length=274, Percent_Identity=44.8905109489051, Blast_Score=266, Evalue=1e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005129 - InterPro: IPR003593 [H]
Pfam domain/function: PF03308 ArgK [H]
EC number: 2.7.-.- [C]
Molecular weight: Translated: 34811; Mature: 34680
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISPDPKALSQGVLAGERRALARAITLIESTRPDHREAAEALMHELLPHTGRSVRIGIT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEEE GVPGAGKSTFIESFGLHVLEMGKKPAVLAVDPSSPRSGGSILGDKTRMEDLSRDARAFIR ECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC PSPSGCTLGGVARRTREAMLVCEAAGFDVIVVETVGVGQSETAVADMVDMFLLVLVPGGG CCCCCCCHHHHHHHHHHHHEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCC DELQGIKKGIVELADAIIVNKADGDLAAAAARAARDYKNALHLLAPASPHWTVPVLTCSA HHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LARSGIDEVWSTIATYRDTMDKAGALADRRAAQAHAWMWNEVSETLLQALRDDPRVERML HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC PDMERGVAGGRMAPGAAARALVRTFRGQG CHHHHCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SISPDPKALSQGVLAGERRALARAITLIESTRPDHREAAEALMHELLPHTGRSVRIGIT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEEE GVPGAGKSTFIESFGLHVLEMGKKPAVLAVDPSSPRSGGSILGDKTRMEDLSRDARAFIR ECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC PSPSGCTLGGVARRTREAMLVCEAAGFDVIVVETVGVGQSETAVADMVDMFLLVLVPGGG CCCCCCCHHHHHHHHHHHHEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCC DELQGIKKGIVELADAIIVNKADGDLAAAAARAARDYKNALHLLAPASPHWTVPVLTCSA HHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LARSGIDEVWSTIATYRDTMDKAGALADRRAAQAHAWMWNEVSETLLQALRDDPRVERML HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC PDMERGVAGGRMAPGAAARALVRTFRGQG CHHHHCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Arg [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8421698; 11259647 [H]