Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83313158

Identifier: 83313158

GI number: 83313158

Start: 4458639

End: 4460123

Strand: Reverse

Name: 83313158

Synonym: amb4059

Alternate gene names: NA

Gene position: 4460123-4458639 (Counterclockwise)

Preceding gene: 83313159

Following gene: 83313157

Centisome position: 89.79

GC content: 66.87

Gene sequence:

>1485_bases
GTGAAGGGGGTATCCGTGCGGAGGGGGTTTCGCAACGCGGTCCTGGGGGTGAGCACGGCGGCATTGCTGTCCGCGTGCTC
GGTCATGCCCGAGGATCTGGCCGAGATCCGCGAGGAGATCAACCGGCATGCGCAATCCCTGCCCCAGGAGATGCTGAAAC
GGCCGCTCTCGGTCGAGGACGCCATGAAGCTGGCGGTGGCCCACAATCTCGATGCACGGGTCAAGGAGCTGGAGGAGGTT
CTGGCCGCCGGCAAGGCCGACATGTCGCTGTTCGCCATGCTGCCGGAACTGGCCGCCAAGGGACGATGGTCCAAGCGCGG
CCCGAGGAAGCTGACTACGTCGAAGGATGTCGGCACCGGCGCCATCAGCAATGATTACAGCACCGGCGAGGATGTGATCG
GCCGTACCGGCGACCTGACCGCCTCGTGGAACCTGGTGGATTTCGGCATCGCCCTGGTGCGTTCCGATCAGGAGGAGGAC
AAGGTGGTCCTGGCGGCGGAAAAGCGCCGCCGCGCCCAGCACCTGCTGCTCCAGGACGTTCAGGCCGCCTATTGGAAGGC
GGTGATCAACGAATTCGCCAACCGCAAGTACAGATCCCTGGAATCCCGGCTGGTCAAGTCGGTGGAGGACGCCGAGACCG
CCGAGCGCACCAAGGTGGGCGATCCCATGCAGATGCTGGGGCATCAGCGCGCCATCGTCGACACCATGCGCCAGATCGCC
GAGTTGCAGCGCCAGACCTCCACCGCCAAGGCCGATCTGGCCGGGCATATGGGGATGCCGTCGGCCTCGGCCTTCGAGCT
GGCCGAGCTGAAGGACGATTCCTTCCTGTCGGCCGAGGACCCGGACTCGAGCGTCGAGGCCATGGAGGCGGTGGCCCTGG
CCAACCGCCCGGAGCTGAAGTCCGAAGAGGTGCAGTTCCGCATCGACCGCAACGAGATCCGCACCGAATTGCTGAAGACC
CTGCCGGGCATCGGCCCGTTCATGGGCGGGCACTACGATTCCAACAGCTTCATCAAGTACAACGCCTGGGCCGACGCCGG
AGCCCACATGGCCTGGAACCTGATGGATATCGTCTCGGCGCCCAAGCGGATCAGCAACGCCCAGAACACCGCCGAGACCA
CCCGCACCCGGCGCCTGGCCATGGGCATGGCGGTGCTGACCCAGGTGCATGTGGCCGACATCCAGGTCCGCCACGCGCTG
AAGGAATACCGCCTGACCGAGCAGATGGCCGCCATCGACCGCCGCATCAGCGGGCTGGCCGCCAAGTCCAAGCAGGCGGG
CAGCGGCAGCGCCATGGAGGAGATCAAGGCGGAGGCCTCGGGCATGCTGTCGACGCTGCGCCGCTTCATCCTCTATTCCG
ACCTGCAAGGCGCCAAGGCCCGGCTCAAGGCCGCCCAGGGCATCGACCACGCCCCGCCGTCCGAGACCTTCACCGACACC
CCGCCGCCGGAGACCACCGCCGATGCTGCCCCCCACGCCGGTTGA

Upstream 100 bases:

>100_bases
ATCGACGGTTGCCTAACTATAACAATGGGATAGCGTGGGATCTTCATGAAACATTCAGACTCCTTCGGCCATAGTGCAGC
GTCGGGTTCGAATGATTTGA

Downstream 100 bases:

>100_bases
GCTGGAGGGGCTGGACGACAAGGCCCGGGCCGTCTCGGCCTGCCTGCGCGCCATGGGGCATGCGGTGGCGGCGACGGCGC
TCAAGGATTCCTACCGCATG

Product: Outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein; Efflux Outer Membrane Protein; Outer Membrane Protein-Like; Outer Membrane Efflux Protein Superfamily

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MKGVSVRRGFRNAVLGVSTAALLSACSVMPEDLAEIREEINRHAQSLPQEMLKRPLSVEDAMKLAVAHNLDARVKELEEV
LAAGKADMSLFAMLPELAAKGRWSKRGPRKLTTSKDVGTGAISNDYSTGEDVIGRTGDLTASWNLVDFGIALVRSDQEED
KVVLAAEKRRRAQHLLLQDVQAAYWKAVINEFANRKYRSLESRLVKSVEDAETAERTKVGDPMQMLGHQRAIVDTMRQIA
ELQRQTSTAKADLAGHMGMPSASAFELAELKDDSFLSAEDPDSSVEAMEAVALANRPELKSEEVQFRIDRNEIRTELLKT
LPGIGPFMGGHYDSNSFIKYNAWADAGAHMAWNLMDIVSAPKRISNAQNTAETTRTRRLAMGMAVLTQVHVADIQVRHAL
KEYRLTEQMAAIDRRISGLAAKSKQAGSGSAMEEIKAEASGMLSTLRRFILYSDLQGAKARLKAAQGIDHAPPSETFTDT
PPPETTADAAPHAG

Sequences:

>Translated_494_residues
MKGVSVRRGFRNAVLGVSTAALLSACSVMPEDLAEIREEINRHAQSLPQEMLKRPLSVEDAMKLAVAHNLDARVKELEEV
LAAGKADMSLFAMLPELAAKGRWSKRGPRKLTTSKDVGTGAISNDYSTGEDVIGRTGDLTASWNLVDFGIALVRSDQEED
KVVLAAEKRRRAQHLLLQDVQAAYWKAVINEFANRKYRSLESRLVKSVEDAETAERTKVGDPMQMLGHQRAIVDTMRQIA
ELQRQTSTAKADLAGHMGMPSASAFELAELKDDSFLSAEDPDSSVEAMEAVALANRPELKSEEVQFRIDRNEIRTELLKT
LPGIGPFMGGHYDSNSFIKYNAWADAGAHMAWNLMDIVSAPKRISNAQNTAETTRTRRLAMGMAVLTQVHVADIQVRHAL
KEYRLTEQMAAIDRRISGLAAKSKQAGSGSAMEEIKAEASGMLSTLRRFILYSDLQGAKARLKAAQGIDHAPPSETFTDT
PPPETTADAAPHAG
>Mature_494_residues
MKGVSVRRGFRNAVLGVSTAALLSACSVMPEDLAEIREEINRHAQSLPQEMLKRPLSVEDAMKLAVAHNLDARVKELEEV
LAAGKADMSLFAMLPELAAKGRWSKRGPRKLTTSKDVGTGAISNDYSTGEDVIGRTGDLTASWNLVDFGIALVRSDQEED
KVVLAAEKRRRAQHLLLQDVQAAYWKAVINEFANRKYRSLESRLVKSVEDAETAERTKVGDPMQMLGHQRAIVDTMRQIA
ELQRQTSTAKADLAGHMGMPSASAFELAELKDDSFLSAEDPDSSVEAMEAVALANRPELKSEEVQFRIDRNEIRTELLKT
LPGIGPFMGGHYDSNSFIKYNAWADAGAHMAWNLMDIVSAPKRISNAQNTAETTRTRRLAMGMAVLTQVHVADIQVRHAL
KEYRLTEQMAAIDRRISGLAAKSKQAGSGSAMEEIKAEASGMLSTLRRFILYSDLQGAKARLKAAQGIDHAPPSETFTDT
PPPETTADAAPHAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54062; Mature: 54062

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGVSVRRGFRNAVLGVSTAALLSACSVMPEDLAEIREEINRHAQSLPQEMLKRPLSVED
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AMKLAVAHNLDARVKELEEVLAAGKADMSLFAMLPELAAKGRWSKRGPRKLTTSKDVGTG
HHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
AISNDYSTGEDVIGRTGDLTASWNLVDFGIALVRSDQEEDKVVLAAEKRRRAQHLLLQDV
CCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHH
QAAYWKAVINEFANRKYRSLESRLVKSVEDAETAERTKVGDPMQMLGHQRAIVDTMRQIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHH
ELQRQTSTAKADLAGHMGMPSASAFELAELKDDSFLSAEDPDSSVEAMEAVALANRPELK
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
SEEVQFRIDRNEIRTELLKTLPGIGPFMGGHYDSNSFIKYNAWADAGAHMAWNLMDIVSA
CCHHEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHH
PKRISNAQNTAETTRTRRLAMGMAVLTQVHVADIQVRHALKEYRLTEQMAAIDRRISGLA
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKSKQAGSGSAMEEIKAEASGMLSTLRRFILYSDLQGAKARLKAAQGIDHAPPSETFTDT
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC
PPPETTADAAPHAG
CCCCCCCCCCCCCC
>Mature Secondary Structure
MKGVSVRRGFRNAVLGVSTAALLSACSVMPEDLAEIREEINRHAQSLPQEMLKRPLSVED
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AMKLAVAHNLDARVKELEEVLAAGKADMSLFAMLPELAAKGRWSKRGPRKLTTSKDVGTG
HHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
AISNDYSTGEDVIGRTGDLTASWNLVDFGIALVRSDQEEDKVVLAAEKRRRAQHLLLQDV
CCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHH
QAAYWKAVINEFANRKYRSLESRLVKSVEDAETAERTKVGDPMQMLGHQRAIVDTMRQIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHH
ELQRQTSTAKADLAGHMGMPSASAFELAELKDDSFLSAEDPDSSVEAMEAVALANRPELK
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
SEEVQFRIDRNEIRTELLKTLPGIGPFMGGHYDSNSFIKYNAWADAGAHMAWNLMDIVSA
CCHHEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHH
PKRISNAQNTAETTRTRRLAMGMAVLTQVHVADIQVRHALKEYRLTEQMAAIDRRISGLA
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKSKQAGSGSAMEEIKAEASGMLSTLRRFILYSDLQGAKARLKAAQGIDHAPPSETFTDT
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC
PPPETTADAAPHAG
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA