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The map label for this gene is yccF [C]

Identifier: 83313129

GI number: 83313129

Start: 4436754

End: 4437842

Strand: Reverse

Name: yccF [C]

Synonym: amb4030

Alternate gene names: 83313129

Gene position: 4437842-4436754 (Counterclockwise)

Preceding gene: 83313130

Following gene: 83313128

Centisome position: 89.34

GC content: 66.67

Gene sequence:

>1089_bases
ATGAGGACGCTCGGCAACATTCTGTGGCACTTCCCGTTCCTCGGGTTCATCAATGCCGCCATCACCTATCTGATCGGCCT
GCTGTTCACGGTTACTGTGGTGGGCGCCCCTCTGGGGCTCGGCCTGATGGAGTTGGGCAAGTTCTATCTGGGGCCGTTCG
GGCGGGCCATGGTGCGCGACAGCGACCTGGAGCCCGGCGCCGAGATCGGGCTGTGGAAGGCCTATTCCTGGATCATCATG
ATCCTGTGGTTCCCCTTCGGGCTGCTCCTGGCCGCCGCTATGGTGGTTCAGGCGTTCCTCCTGTGCTGCACCATCATCGG
CATACCGCTGGCCATCGTGGTGGCCAAGGCCACGGGCACGGTCTTCAATCCCGTTGGCAAGCGGTGTGTTTCGGTGGCCG
CCGCGCAGGAATTGCAGCACCGGGCGGCTTTGCGTGAACTCGACGGCCTCGCCTGCCGGCCGGCGCGATCCGAGCCCACC
TTGGGCCAGCCCGCCGCGCCCAGCGGCTCCGACACGATCCTGAATGTCCGCTCGGATGATCGCCCCGCCCCGGTCAGCCA
TGGCCCGCAACTGAGCAGCGGGTTGAAGATTGGCCTTGCCGTCGGCATTCCTCTGGTCCTGGCTGTGGCGTTCCTGGGGC
CGAAACTGTTCAACTCGTCCTCCCCCTCGGCGACCATTCCCGCCACAACTTTACAGCCCCAGATTCAGAAGCTGGCCCCG
GTCGTTCCCGCCGCCGTGATCGCGCCGGCCAAGCAAATTCCCGCCAGCCATTCCGGCATCCCCGAGATTCTCGATACAGC
CACTCTCAGCGTGAACGGACAGCGCCTGCCCCTGGCGGGCCTGCGCCCGGTGGAAATGCCCCAAGCCGCCGCCGCCGCCC
GCTCCTACCTGGAACAGGCGGGAGGGGTGACGTGCGAACAGGCCCCGGTCGGCGGCTGGCGCTGTGTGTCGCAGTCCAAG
GGACTGGATATCGCCGAGGTCTTCGCCCTGTCCGGCTTCGCCAAGGCCGCCGCCAATGCACCCGACTTCATCCGCAACGC
CGAGGGTATGGCGCGGGAAAACCGGCGGGGCGTCTGGGGCGCTTCGTAA

Upstream 100 bases:

>100_bases
ACGAGGAAACCGTGACCTCGTGCCTGAACGAACAGAAGCAGTGGGTGGTGGCCTCGCGCTGAGGCTTCCCGTCTAGGACC
TAGCCCGCGAGGAGGCGGAA

Downstream 100 bases:

>100_bases
GCAAAGCGGCGGAGTGCGTCCGATGGCGAAGATGATTCCTGCGTCGTTTTCCGAAGTAGGGCGGGAGGCCGGGGCCGAGC
GCGCCGTCTTCCACGCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MRTLGNILWHFPFLGFINAAITYLIGLLFTVTVVGAPLGLGLMELGKFYLGPFGRAMVRDSDLEPGAEIGLWKAYSWIIM
ILWFPFGLLLAAAMVVQAFLLCCTIIGIPLAIVVAKATGTVFNPVGKRCVSVAAAQELQHRAALRELDGLACRPARSEPT
LGQPAAPSGSDTILNVRSDDRPAPVSHGPQLSSGLKIGLAVGIPLVLAVAFLGPKLFNSSSPSATIPATTLQPQIQKLAP
VVPAAVIAPAKQIPASHSGIPEILDTATLSVNGQRLPLAGLRPVEMPQAAAAARSYLEQAGGVTCEQAPVGGWRCVSQSK
GLDIAEVFALSGFAKAAANAPDFIRNAEGMARENRRGVWGAS

Sequences:

>Translated_362_residues
MRTLGNILWHFPFLGFINAAITYLIGLLFTVTVVGAPLGLGLMELGKFYLGPFGRAMVRDSDLEPGAEIGLWKAYSWIIM
ILWFPFGLLLAAAMVVQAFLLCCTIIGIPLAIVVAKATGTVFNPVGKRCVSVAAAQELQHRAALRELDGLACRPARSEPT
LGQPAAPSGSDTILNVRSDDRPAPVSHGPQLSSGLKIGLAVGIPLVLAVAFLGPKLFNSSSPSATIPATTLQPQIQKLAP
VVPAAVIAPAKQIPASHSGIPEILDTATLSVNGQRLPLAGLRPVEMPQAAAAARSYLEQAGGVTCEQAPVGGWRCVSQSK
GLDIAEVFALSGFAKAAANAPDFIRNAEGMARENRRGVWGAS
>Mature_362_residues
MRTLGNILWHFPFLGFINAAITYLIGLLFTVTVVGAPLGLGLMELGKFYLGPFGRAMVRDSDLEPGAEIGLWKAYSWIIM
ILWFPFGLLLAAAMVVQAFLLCCTIIGIPLAIVVAKATGTVFNPVGKRCVSVAAAQELQHRAALRELDGLACRPARSEPT
LGQPAAPSGSDTILNVRSDDRPAPVSHGPQLSSGLKIGLAVGIPLVLAVAFLGPKLFNSSSPSATIPATTLQPQIQKLAP
VVPAAVIAPAKQIPASHSGIPEILDTATLSVNGQRLPLAGLRPVEMPQAAAAARSYLEQAGGVTCEQAPVGGWRCVSQSK
GLDIAEVFALSGFAKAAANAPDFIRNAEGMARENRRGVWGAS

Specific function: Unknown

COG id: COG3304

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37868; Mature: 37868

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLGNILWHFPFLGFINAAITYLIGLLFTVTVVGAPLGLGLMELGKFYLGPFGRAMVRD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHCC
SDLEPGAEIGLWKAYSWIIMILWFPFGLLLAAAMVVQAFLLCCTIIGIPLAIVVAKATGT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VFNPVGKRCVSVAAAQELQHRAALRELDGLACRPARSEPTLGQPAAPSGSDTILNVRSDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
RPAPVSHGPQLSSGLKIGLAVGIPLVLAVAFLGPKLFNSSSPSATIPATTLQPQIQKLAP
CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHH
VVPAAVIAPAKQIPASHSGIPEILDTATLSVNGQRLPLAGLRPVEMPQAAAAARSYLEQA
HHHHHHHCCHHHCCCCCCCCHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
GGVTCEQAPVGGWRCVSQSKGLDIAEVFALSGFAKAAANAPDFIRNAEGMARENRRGVWG
CCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHCCCCCCC
AS
CC
>Mature Secondary Structure
MRTLGNILWHFPFLGFINAAITYLIGLLFTVTVVGAPLGLGLMELGKFYLGPFGRAMVRD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHCC
SDLEPGAEIGLWKAYSWIIMILWFPFGLLLAAAMVVQAFLLCCTIIGIPLAIVVAKATGT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VFNPVGKRCVSVAAAQELQHRAALRELDGLACRPARSEPTLGQPAAPSGSDTILNVRSDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
RPAPVSHGPQLSSGLKIGLAVGIPLVLAVAFLGPKLFNSSSPSATIPATTLQPQIQKLAP
CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHH
VVPAAVIAPAKQIPASHSGIPEILDTATLSVNGQRLPLAGLRPVEMPQAAAAARSYLEQA
HHHHHHHCCHHHCCCCCCCCHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
GGVTCEQAPVGGWRCVSQSKGLDIAEVFALSGFAKAAANAPDFIRNAEGMARENRRGVWG
CCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHCCCCCCC
AS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA