| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83313128
Identifier: 83313128
GI number: 83313128
Start: 4435577
End: 4436740
Strand: Reverse
Name: 83313128
Synonym: amb4029
Alternate gene names: NA
Gene position: 4436740-4435577 (Counterclockwise)
Preceding gene: 83313129
Following gene: 83313124
Centisome position: 89.32
GC content: 63.06
Gene sequence:
>1164_bases GTGCGTCCGATGGCGAAGATGATTCCTGCGTCGTTTTCCGAAGTAGGGCGGGAGGCCGGGGCCGAGCGCGCCGTCTTCCA CGCGCTGGAACGGCAATTGAGCGGCGACTTTACTGTCCTGTGGTCCATTGGCACTCTGGGCAGCCAGCCCCGTGAGATCG ACTTTCTGGTCCTCCACCCTCGCTTCGGAGTGGTGGTAATCGAGGTCAAGGGCGGGGCCGTTACGCTCGGCAATCCCATG GACAGCCGGCGCAAGTGGACAAGCACCACCCGTTCCGCCGGCCAGCCTGCCTCCATCAAGAATCCCTATCACCAAGCGGT TGGGGCGGGGATGTCCTTTGTCTCCGACTGGAAGGCCCATTCATCGGTTGGCGGCTTTTTTGCCATAACGCCGCTGGTGA TCCTGCCTCACACCCCGCGCCCGTCCAACGCCGAGGCTGTTCTGGAACCGAAGACCGAGCATTTCCTGTTCGAGAACGAC ATGGCGGTGATCGGCACTCGTATTGCCGAGATGATGGAAAAGGCCATGGCTTCGGGCGAGGGCTATAAGCCGCTCGAATC CGCCGGGGTTACCTCCATCATCGAGTTGTATGGGCGTCAGCATGTTGTGGTGGAGCCGGCCCTTGTGGAGCCGGAGGAAG AAACGGCGCCCACATCATTCCAGCCGCCGCCCAATAAGCGCCCCGCCATCGTGAAGATCGCCGGGCTGACCATCGCCACC AGTTTGGTTGTCGCTTTGGCGGCTGTTCTTGTCCCTCGGCTTATTCCGGCAAGCCCACCCGCAACGCAGCCAGCCGCCGC CGTAAAGCCGCCAGCTTCGGCTCCGCCAAAGACGCCGCAAACCATCACGGGCGTGCCGGACATTCTGGATACCGCCACCC TCAGCGTGAATGGTCAGCGTCTACCCCTGACAGGCCTGCGCCCCGTCGATTTGCCGGAAGCCAAAGCCTTTGCCCGTACG TATTTGGCTCAGGCGGGAAATGTGAAGTGCTATATGGCGCCGGTCGGCGGCTGGCGCTGCATCTCGCTCGCCAAAGGCCT CGATATCGCCGAGGTCTTCGCCCTTTCCGGTTTCGCCAAGGCCGCCGCCAACGCCCCAGATTTCATCCGCAATGCCGAAG CGTTGGCGCGGGAGAACCGGCGGGGTGTCTGGGGCGCCTCCTGA
Upstream 100 bases:
>100_bases AAGGCCGCCGCCAATGCACCCGACTTCATCCGCAACGCCGAGGGTATGGCGCGGGAAAACCGGCGGGGCGTCTGGGGCGC TTCGTAAGCAAAGCGGCGGA
Downstream 100 bases:
>100_bases GAACAGCGCATCCATTTCAGCAGCACGGCTGGAATGTCTTTGAAGACGGATGACAGGGGTGAGGTCACACCTTCGGCTTT CGAATCCCCATGGATTCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MRPMAKMIPASFSEVGREAGAERAVFHALERQLSGDFTVLWSIGTLGSQPREIDFLVLHPRFGVVVIEVKGGAVTLGNPM DSRRKWTSTTRSAGQPASIKNPYHQAVGAGMSFVSDWKAHSSVGGFFAITPLVILPHTPRPSNAEAVLEPKTEHFLFEND MAVIGTRIAEMMEKAMASGEGYKPLESAGVTSIIELYGRQHVVVEPALVEPEEETAPTSFQPPPNKRPAIVKIAGLTIAT SLVVALAAVLVPRLIPASPPATQPAAAVKPPASAPPKTPQTITGVPDILDTATLSVNGQRLPLTGLRPVDLPEAKAFART YLAQAGNVKCYMAPVGGWRCISLAKGLDIAEVFALSGFAKAAANAPDFIRNAEALARENRRGVWGAS
Sequences:
>Translated_387_residues MRPMAKMIPASFSEVGREAGAERAVFHALERQLSGDFTVLWSIGTLGSQPREIDFLVLHPRFGVVVIEVKGGAVTLGNPM DSRRKWTSTTRSAGQPASIKNPYHQAVGAGMSFVSDWKAHSSVGGFFAITPLVILPHTPRPSNAEAVLEPKTEHFLFEND MAVIGTRIAEMMEKAMASGEGYKPLESAGVTSIIELYGRQHVVVEPALVEPEEETAPTSFQPPPNKRPAIVKIAGLTIAT SLVVALAAVLVPRLIPASPPATQPAAAVKPPASAPPKTPQTITGVPDILDTATLSVNGQRLPLTGLRPVDLPEAKAFART YLAQAGNVKCYMAPVGGWRCISLAKGLDIAEVFALSGFAKAAANAPDFIRNAEALARENRRGVWGAS >Mature_387_residues MRPMAKMIPASFSEVGREAGAERAVFHALERQLSGDFTVLWSIGTLGSQPREIDFLVLHPRFGVVVIEVKGGAVTLGNPM DSRRKWTSTTRSAGQPASIKNPYHQAVGAGMSFVSDWKAHSSVGGFFAITPLVILPHTPRPSNAEAVLEPKTEHFLFEND MAVIGTRIAEMMEKAMASGEGYKPLESAGVTSIIELYGRQHVVVEPALVEPEEETAPTSFQPPPNKRPAIVKIAGLTIAT SLVVALAAVLVPRLIPASPPATQPAAAVKPPASAPPKTPQTITGVPDILDTATLSVNGQRLPLTGLRPVDLPEAKAFART YLAQAGNVKCYMAPVGGWRCISLAKGLDIAEVFALSGFAKAAANAPDFIRNAEALARENRRGVWGAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41088; Mature: 41088
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPMAKMIPASFSEVGREAGAERAVFHALERQLSGDFTVLWSIGTLGSQPREIDFLVLHP CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEECC RFGVVVIEVKGGAVTLGNPMDSRRKWTSTTRSAGQPASIKNPYHQAVGAGMSFVSDWKAH CCCEEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHH SSVGGFFAITPLVILPHTPRPSNAEAVLEPKTEHFLFENDMAVIGTRIAEMMEKAMASGE HCCCCCEEECCEEEECCCCCCCCCCEEECCCHHHEEECCCHHHHHHHHHHHHHHHHHCCC GYKPLESAGVTSIIELYGRQHVVVEPALVEPEEETAPTSFQPPPNKRPAIVKIAGLTIAT CCCCHHHCCHHHHHHHHCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCEEEEEHHHHHH SLVVALAAVLVPRLIPASPPATQPAAAVKPPASAPPKTPQTITGVPDILDTATLSVNGQR HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCC LPLTGLRPVDLPEAKAFARTYLAQAGNVKCYMAPVGGWRCISLAKGLDIAEVFALSGFAK CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEHHHHCCCCHHHHHHHHHHHH AAANAPDFIRNAEALARENRRGVWGAS HHCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRPMAKMIPASFSEVGREAGAERAVFHALERQLSGDFTVLWSIGTLGSQPREIDFLVLHP CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEECC RFGVVVIEVKGGAVTLGNPMDSRRKWTSTTRSAGQPASIKNPYHQAVGAGMSFVSDWKAH CCCEEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHH SSVGGFFAITPLVILPHTPRPSNAEAVLEPKTEHFLFENDMAVIGTRIAEMMEKAMASGE HCCCCCEEECCEEEECCCCCCCCCCEEECCCHHHEEECCCHHHHHHHHHHHHHHHHHCCC GYKPLESAGVTSIIELYGRQHVVVEPALVEPEEETAPTSFQPPPNKRPAIVKIAGLTIAT CCCCHHHCCHHHHHHHHCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCEEEEEHHHHHH SLVVALAAVLVPRLIPASPPATQPAAAVKPPASAPPKTPQTITGVPDILDTATLSVNGQR HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCC LPLTGLRPVDLPEAKAFARTYLAQAGNVKCYMAPVGGWRCISLAKGLDIAEVFALSGFAK CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEHHHHCCCCHHHHHHHHHHHH AAANAPDFIRNAEALARENRRGVWGAS HHCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA