Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83313067

Identifier: 83313067

GI number: 83313067

Start: 4378009

End: 4378353

Strand: Reverse

Name: 83313067

Synonym: amb3968

Alternate gene names: NA

Gene position: 4378353-4378009 (Counterclockwise)

Preceding gene: 83313070

Following gene: 83313065

Centisome position: 88.15

GC content: 69.57

Gene sequence:

>345_bases
ATGCTTATTGGGCAGGTGTCACAAGAGGCTGTAGACTTCCCCATCTTGCAGGAGAAAGACATGCCCCGGACGCTTCAACT
GGTTCTCGACGACGATCTCGCCCGCCGGCTGGACCAGCGCCTGGCGGTCGAGGGTGGTGATGCGGCGGCGCTGCTGGACC
GGGCGTTGCGCCACTTCCTCGATGTCGAGGACGACAGGGACGCCGCCCACCGGGCGGTGATCGCGGCGGCGGGGGAGGGC
GAATTCGGCGCTCGCCCCGGCCTGTCCGCCGACCATGCCCGGGTCAGGCTCTGGCTGCTGGGCTGGGGGGGCGACGGAGA
ATCCGGCCCGCCCGGAAGCTGCTGA

Upstream 100 bases:

>100_bases
CGCCATGGCGTCGAATTCCTCGCGCGAGATCTTGCGCCCCAGTTCAGCCGCTTCGAACATGTCCCATCCCCCCATGGCGA
TCAACCGGAAGTATGAGCGT

Downstream 100 bases:

>100_bases
GATGATCCGCTGGTCCGATGCCGCCCTCACCGATCTGTTCCGGCTGCGCGGCGGCCTGGGCGGCGAGGCGGCCAAGCGCA
TCGGCCGCCTGATCGCCGAT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MLIGQVSQEAVDFPILQEKDMPRTLQLVLDDDLARRLDQRLAVEGGDAAALLDRALRHFLDVEDDRDAAHRAVIAAAGEG
EFGARPGLSADHARVRLWLLGWGGDGESGPPGSC

Sequences:

>Translated_114_residues
MLIGQVSQEAVDFPILQEKDMPRTLQLVLDDDLARRLDQRLAVEGGDAAALLDRALRHFLDVEDDRDAAHRAVIAAAGEG
EFGARPGLSADHARVRLWLLGWGGDGESGPPGSC
>Mature_114_residues
MLIGQVSQEAVDFPILQEKDMPRTLQLVLDDDLARRLDQRLAVEGGDAAALLDRALRHFLDVEDDRDAAHRAVIAAAGEG
EFGARPGLSADHARVRLWLLGWGGDGESGPPGSC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12269; Mature: 12269

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIGQVSQEAVDFPILQEKDMPRTLQLVLDDDLARRLDQRLAVEGGDAAALLDRALRHFL
CCCCCCCHHHHCCCCCCCCCCCHHHHHEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
DVEDDRDAAHRAVIAAAGEGEFGARPGLSADHARVRLWLLGWGGDGESGPPGSC
CCCCCCCCHHEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MLIGQVSQEAVDFPILQEKDMPRTLQLVLDDDLARRLDQRLAVEGGDAAALLDRALRHFL
CCCCCCCHHHHCCCCCCCCCCCHHHHHEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
DVEDDRDAAHRAVIAAAGEGEFGARPGLSADHARVRLWLLGWGGDGESGPPGSC
CCCCCCCCHHEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA