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The map label for this gene is ybjT [C]

Identifier: 83313030

GI number: 83313030

Start: 4342259

End: 4343278

Strand: Reverse

Name: ybjT [C]

Synonym: amb3931

Alternate gene names: 83313030

Gene position: 4343278-4342259 (Counterclockwise)

Preceding gene: 83313038

Following gene: 83313025

Centisome position: 87.44

GC content: 68.24

Gene sequence:

>1020_bases
ATGGAGGGATGCATGGCGCGGCGCGTGGTCACGGTATTCGGTGGTTCGGGCTTTATCGGCAGGAACGTGGTCAAGCGTCT
GGCCGCCCAGGGCTGGGTGGTGCGCGCCGCGGTGCGCGACCCCATCGCGGCCGAGTTTCTGAAGCCCATGGGTGACGTGG
GGCAGGTGACGCCGCTGCGCGCCGACATCACCGACCCCAAGGCGGTGGCCATGGCCGTTGCCGGCGTGGATGCGGTGGTC
AATGCGGTGGGCATTCTCTATGAGAGCGGCCGGGCCACCTTCGACGCCATCCATGTGAAGGGTGCGGCCAACGTGGCGGC
GGCGGCCAAGGCGGCGGGCGTGGCCCGTCTGGTCCATGTGTCCGCGCTGGGCGCCGACAAGAATTCCGAGGCGGCCTATG
CCCGCTCCAAGGCGGCGGGCGAGGAGGCGGTTCTGGCCGCTTTCCCCGGCGCCTCGGTCGTGCGTCCCTCGGTGGTGTTC
GGCCCCGATGATGATTTCTTCAATCGCTTCGGCAAGCTGGCCATGGTGTCGCCGGTGCTGCCGGTGTTCACCGGCGACGG
CTTCAAGCCGGTCTGCGGCGAGACCGGGTGCTCCATCGACCTGTTCGGCTCGGGCGGCCCCATCTTCCAGCCGGTCAGCG
TCTCCGACGTGGCCCAGGCGGTGGTGCAGATCCTCGACGACACCCGTCACGCCGGCAAGACCTTCGAATTGGGCGGGCCG
CGCCGCTATTCCATGAAGGAGATCATGGAACTGGTGATGTCGTCCACCGGCCGCCAGCGTCTGTTGGTGCCGCTGCCCTT
CGGCCTGGGCATGCTGCAGGCCACCTTCCTTCAGATGCTGCCCAAGCCCATGCTGACCAAGGACCAGGTGCGGATGATGA
AGGTGGACAACGTGGTGCGCGGCGGCAAGCCGGGCCTGACCGAGCTGGGTATCACGCCCACCTCGGCCGAGGCGATCCTG
CCGCTTTACATGAAGCGCTACGGCAAGCAGTTGCCCCCCGGCCGCGAGAACGCGGCCTGA

Upstream 100 bases:

>100_bases
CGGTTTTTGTGTTTTCGCCCCCCGCCCTTTACACCCGCGTGGCTTATGGGCTAGCTTTCGCCCCAAAGATTTGGAGGCGG
CGCGCGGCGCCGTCCGGCGA

Downstream 100 bases:

>100_bases
GACCGAACTCAGGTTCACGGAAATGAAAAAGGGCCACCCTCGGGTGGCCCTTTTGGCGTCAGGCCCGCAGCGCCTTGCGG
GTGACCTGATTGCGAAGCTC

Product: NADH-ubiquinone oxidoreductase 40 kDa subunit

Products: NAD+; ubiquinol

Alternate protein names: NADH Dehydrogenase; NADH-Ubiquinone Oxidoreductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase; NADH-Ubiquinone Oxidoreductase Subunit; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; NADH-Ubiquinone Oxireductase; NADH-Ubiquinone Oxidoreductase Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta-Hydroxy-Delta(5)-Steroid Dehydrogenase; NADH Ubiquinone Oxidoreductase; NADH Dehydrogenase 1 Alpha Subcomplex; Dehydrogenase; NADH Dehydrogenase/NADH Dehydrogenase Protein; Ubiquinone Dependent NADH Dehydrogenase; NADH Dehydrogenase Subunit; NADH Dehydrogenase/Oxidoreductase-Like Protein; Homolog NADH Dehydrogenase; NADH Dehydrogenase-Like Protein; NAD Dependent Epimerase; Nucleoside-Diphosphate Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family; NADH-Ubiquinone Oxidoreductase -Like Protein; NADH-Ubiquinone Oxidoreductase Putativ; NADH-Quinone Oxidoreductase

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MEGCMARRVVTVFGGSGFIGRNVVKRLAAQGWVVRAAVRDPIAAEFLKPMGDVGQVTPLRADITDPKAVAMAVAGVDAVV
NAVGILYESGRATFDAIHVKGAANVAAAAKAAGVARLVHVSALGADKNSEAAYARSKAAGEEAVLAAFPGASVVRPSVVF
GPDDDFFNRFGKLAMVSPVLPVFTGDGFKPVCGETGCSIDLFGSGGPIFQPVSVSDVAQAVVQILDDTRHAGKTFELGGP
RRYSMKEIMELVMSSTGRQRLLVPLPFGLGMLQATFLQMLPKPMLTKDQVRMMKVDNVVRGGKPGLTELGITPTSAEAIL
PLYMKRYGKQLPPGRENAA

Sequences:

>Translated_339_residues
MEGCMARRVVTVFGGSGFIGRNVVKRLAAQGWVVRAAVRDPIAAEFLKPMGDVGQVTPLRADITDPKAVAMAVAGVDAVV
NAVGILYESGRATFDAIHVKGAANVAAAAKAAGVARLVHVSALGADKNSEAAYARSKAAGEEAVLAAFPGASVVRPSVVF
GPDDDFFNRFGKLAMVSPVLPVFTGDGFKPVCGETGCSIDLFGSGGPIFQPVSVSDVAQAVVQILDDTRHAGKTFELGGP
RRYSMKEIMELVMSSTGRQRLLVPLPFGLGMLQATFLQMLPKPMLTKDQVRMMKVDNVVRGGKPGLTELGITPTSAEAIL
PLYMKRYGKQLPPGRENAA
>Mature_339_residues
MEGCMARRVVTVFGGSGFIGRNVVKRLAAQGWVVRAAVRDPIAAEFLKPMGDVGQVTPLRADITDPKAVAMAVAGVDAVV
NAVGILYESGRATFDAIHVKGAANVAAAAKAAGVARLVHVSALGADKNSEAAYARSKAAGEEAVLAAFPGASVVRPSVVF
GPDDDFFNRFGKLAMVSPVLPVFTGDGFKPVCGETGCSIDLFGSGGPIFQPVSVSDVAQAVVQILDDTRHAGKTFELGGP
RRYSMKEIMELVMSSTGRQRLLVPLPFGLGMLQATFLQMLPKPMLTKDQVRMMKVDNVVRGGKPGLTELGITPTSAEAIL
PLYMKRYGKQLPPGRENAA

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=327, Percent_Identity=33.3333333333333, Blast_Score=154, Evalue=1e-37,
Organism=Escherichia coli, GI87081793, Length=276, Percent_Identity=22.8260869565217, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17556106, Length=323, Percent_Identity=27.8637770897833, Blast_Score=122, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24667554, Length=338, Percent_Identity=29.585798816568, Blast_Score=135, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 35613; Mature: 35613

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGCMARRVVTVFGGSGFIGRNVVKRLAAQGWVVRAAVRDPIAAEFLKPMGDVGQVTPLR
CCCHHHHHEEEEECCCCCHHHHHHHHHHHCCCEEEHHHHCHHHHHHHHHCCCCCCCCCCC
ADITDPKAVAMAVAGVDAVVNAVGILYESGRATFDAIHVKGAANVAAAAKAAGVARLVHV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH
SALGADKNSEAAYARSKAAGEEAVLAAFPGASVVRPSVVFGPDDDFFNRFGKLAMVSPVL
HHHCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCHHHHHHHCCHHHHCCCH
PVFTGDGFKPVCGETGCSIDLFGSGGPIFQPVSVSDVAQAVVQILDDTRHAGKTFELGGP
HHEECCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCC
RRYSMKEIMELVMSSTGRQRLLVPLPFGLGMLQATFLQMLPKPMLTKDQVRMMKVDNVVR
CCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC
GGKPGLTELGITPTSAEAILPLYMKRYGKQLPPGRENAA
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MEGCMARRVVTVFGGSGFIGRNVVKRLAAQGWVVRAAVRDPIAAEFLKPMGDVGQVTPLR
CCCHHHHHEEEEECCCCCHHHHHHHHHHHCCCEEEHHHHCHHHHHHHHHCCCCCCCCCCC
ADITDPKAVAMAVAGVDAVVNAVGILYESGRATFDAIHVKGAANVAAAAKAAGVARLVHV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH
SALGADKNSEAAYARSKAAGEEAVLAAFPGASVVRPSVVFGPDDDFFNRFGKLAMVSPVL
HHHCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCHHHHHHHCCHHHHCCCH
PVFTGDGFKPVCGETGCSIDLFGSGGPIFQPVSVSDVAQAVVQILDDTRHAGKTFELGGP
HHEECCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCC
RRYSMKEIMELVMSSTGRQRLLVPLPFGLGMLQATFLQMLPKPMLTKDQVRMMKVDNVVR
CCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC
GGKPGLTELGITPTSAEAILPLYMKRYGKQLPPGRENAA
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA