Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is yeeZ [H]

Identifier: 83313009

GI number: 83313009

Start: 4324357

End: 4325187

Strand: Reverse

Name: yeeZ [H]

Synonym: amb3910

Alternate gene names: 83313009

Gene position: 4325187-4324357 (Counterclockwise)

Preceding gene: 83313012

Following gene: 83313004

Centisome position: 87.08

GC content: 70.16

Gene sequence:

>831_bases
ATGGCCAAGCGATTTTTCCTGTTCGGGCTGGGCTTTTCCGGCCGGGTGATCGCCCGCGGGCTGGTCGAGGCGGGCTGGGA
GGTGATGGCCACCACCCGCTCGGGCGAGGCGGCGGACTGTCCCGGGGTCCAGGTTCTGCCCTTCGACCGCGACCATCGTC
TGCCGGCCGGCTGTCTGGACGGAGTCGAGGCGGTGCTGTCCTCGGTGCCGCCCGATGATCGCGGCGACCCCGTGCTCGAC
CTGATGGCCGACGCCATCCGCGCGGCGGCTCCCGCCTGGCTCGGCTATCTCTCCACCACCGGCGTCTACGGCGATCATGG
CGGTGCCTGGGTGGACGAGGCGACGCCGCCCAATCCCGGCCTGGACCGCTCGCGCCGTCGTCTGGCCGCCGAAACCCAGT
GGCGAGAGAGGGGGGCGCATATCTTCCGGCTGGCGGGAATTTACGGCCCCGGCCGTTCGGCGGTGGACACCGTGCGGGCC
GGGCAGGCGCGTCGCGTGGTCAAGCCGGGCCAGGTGTTCAGTCGGATCCATGTGGAGGACATCGCCGCCGCGATTCTGGC
CTCGCTGGGGCGTCCCGATCCCGGGGCGATCTACAATCTGTGCGACGATGACGCCGCCCCGCCCCAGGAGGTCATCGCCC
ACGCCTGCGCCCTGCTGGGCCTCGAACCGCCGCCGGAAATTCCGTGGGAGCAGGCCGAGGCGACCCTGTCGCCCATGGCG
CTCAGCTTCTATGCCGACAACAAGCGCGTCGACAACGCCCGGATGAAGCGCGACCTGGGCGTCCGGCTGAAATACCCGAC
CTATCGCGAGGGGCTGAAAAGCTGTCTATGA

Upstream 100 bases:

>100_bases
CGGGGCGGGAAGCCACAGCAGGGGCAGCAGCAGGGGGATGGTGCGTAGTCTCATGGGGGCGTAGTCTCTCCAATTGTGCG
GGCGGTGCAAGGAAAGACAG

Downstream 100 bases:

>100_bases
CGGCGTCGGCACGGCGAGGCGGGGCTCCCGCCCCTTAGCCCCGGTTGGAGGCGAGCCTCCAAACCTCCCCTGGTTTTGAA
AATAAAAGGGGGGCCGGGGC

Product: nucleoside-diphosphate-sugar epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MAKRFFLFGLGFSGRVIARGLVEAGWEVMATTRSGEAADCPGVQVLPFDRDHRLPAGCLDGVEAVLSSVPPDDRGDPVLD
LMADAIRAAAPAWLGYLSTTGVYGDHGGAWVDEATPPNPGLDRSRRRLAAETQWRERGAHIFRLAGIYGPGRSAVDTVRA
GQARRVVKPGQVFSRIHVEDIAAAILASLGRPDPGAIYNLCDDDAAPPQEVIAHACALLGLEPPPEIPWEQAEATLSPMA
LSFYADNKRVDNARMKRDLGVRLKYPTYREGLKSCL

Sequences:

>Translated_276_residues
MAKRFFLFGLGFSGRVIARGLVEAGWEVMATTRSGEAADCPGVQVLPFDRDHRLPAGCLDGVEAVLSSVPPDDRGDPVLD
LMADAIRAAAPAWLGYLSTTGVYGDHGGAWVDEATPPNPGLDRSRRRLAAETQWRERGAHIFRLAGIYGPGRSAVDTVRA
GQARRVVKPGQVFSRIHVEDIAAAILASLGRPDPGAIYNLCDDDAAPPQEVIAHACALLGLEPPPEIPWEQAEATLSPMA
LSFYADNKRVDNARMKRDLGVRLKYPTYREGLKSCL
>Mature_275_residues
AKRFFLFGLGFSGRVIARGLVEAGWEVMATTRSGEAADCPGVQVLPFDRDHRLPAGCLDGVEAVLSSVPPDDRGDPVLDL
MADAIRAAAPAWLGYLSTTGVYGDHGGAWVDEATPPNPGLDRSRRRLAAETQWRERGAHIFRLAGIYGPGRSAVDTVRAG
QARRVVKPGQVFSRIHVEDIAAAILASLGRPDPGAIYNLCDDDAAPPQEVIAHACALLGLEPPPEIPWEQAEATLSPMAL
SFYADNKRVDNARMKRDLGVRLKYPTYREGLKSCL

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788327, Length=283, Percent_Identity=30.0353356890459, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 29795; Mature: 29664

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRFFLFGLGFSGRVIARGLVEAGWEVMATTRSGEAADCPGVQVLPFDRDHRLPAGCLD
CCCEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCHHHHH
GVEAVLSSVPPDDRGDPVLDLMADAIRAAAPAWLGYLSTTGVYGDHGGAWVDEATPPNPG
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
LDRSRRRLAAETQWRERGAHIFRLAGIYGPGRSAVDTVRAGQARRVVKPGQVFSRIHVED
CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH
IAAAILASLGRPDPGAIYNLCDDDAAPPQEVIAHACALLGLEPPPEIPWEQAEATLSPMA
HHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCEE
LSFYADNKRVDNARMKRDLGVRLKYPTYREGLKSCL
EEEECCCCCCCHHHHHHCCCCEECCCHHHHHHHHCC
>Mature Secondary Structure 
AKRFFLFGLGFSGRVIARGLVEAGWEVMATTRSGEAADCPGVQVLPFDRDHRLPAGCLD
CCEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCHHHHH
GVEAVLSSVPPDDRGDPVLDLMADAIRAAAPAWLGYLSTTGVYGDHGGAWVDEATPPNPG
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
LDRSRRRLAAETQWRERGAHIFRLAGIYGPGRSAVDTVRAGQARRVVKPGQVFSRIHVED
CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH
IAAAILASLGRPDPGAIYNLCDDDAAPPQEVIAHACALLGLEPPPEIPWEQAEATLSPMA
HHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCEE
LSFYADNKRVDNARMKRDLGVRLKYPTYREGLKSCL
EEEECCCCCCCHHHHHHCCCCEECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]