| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is yeeZ [H]
Identifier: 83313009
GI number: 83313009
Start: 4324357
End: 4325187
Strand: Reverse
Name: yeeZ [H]
Synonym: amb3910
Alternate gene names: 83313009
Gene position: 4325187-4324357 (Counterclockwise)
Preceding gene: 83313012
Following gene: 83313004
Centisome position: 87.08
GC content: 70.16
Gene sequence:
>831_bases ATGGCCAAGCGATTTTTCCTGTTCGGGCTGGGCTTTTCCGGCCGGGTGATCGCCCGCGGGCTGGTCGAGGCGGGCTGGGA GGTGATGGCCACCACCCGCTCGGGCGAGGCGGCGGACTGTCCCGGGGTCCAGGTTCTGCCCTTCGACCGCGACCATCGTC TGCCGGCCGGCTGTCTGGACGGAGTCGAGGCGGTGCTGTCCTCGGTGCCGCCCGATGATCGCGGCGACCCCGTGCTCGAC CTGATGGCCGACGCCATCCGCGCGGCGGCTCCCGCCTGGCTCGGCTATCTCTCCACCACCGGCGTCTACGGCGATCATGG CGGTGCCTGGGTGGACGAGGCGACGCCGCCCAATCCCGGCCTGGACCGCTCGCGCCGTCGTCTGGCCGCCGAAACCCAGT GGCGAGAGAGGGGGGCGCATATCTTCCGGCTGGCGGGAATTTACGGCCCCGGCCGTTCGGCGGTGGACACCGTGCGGGCC GGGCAGGCGCGTCGCGTGGTCAAGCCGGGCCAGGTGTTCAGTCGGATCCATGTGGAGGACATCGCCGCCGCGATTCTGGC CTCGCTGGGGCGTCCCGATCCCGGGGCGATCTACAATCTGTGCGACGATGACGCCGCCCCGCCCCAGGAGGTCATCGCCC ACGCCTGCGCCCTGCTGGGCCTCGAACCGCCGCCGGAAATTCCGTGGGAGCAGGCCGAGGCGACCCTGTCGCCCATGGCG CTCAGCTTCTATGCCGACAACAAGCGCGTCGACAACGCCCGGATGAAGCGCGACCTGGGCGTCCGGCTGAAATACCCGAC CTATCGCGAGGGGCTGAAAAGCTGTCTATGA
Upstream 100 bases:
>100_bases CGGGGCGGGAAGCCACAGCAGGGGCAGCAGCAGGGGGATGGTGCGTAGTCTCATGGGGGCGTAGTCTCTCCAATTGTGCG GGCGGTGCAAGGAAAGACAG
Downstream 100 bases:
>100_bases CGGCGTCGGCACGGCGAGGCGGGGCTCCCGCCCCTTAGCCCCGGTTGGAGGCGAGCCTCCAAACCTCCCCTGGTTTTGAA AATAAAAGGGGGGCCGGGGC
Product: nucleoside-diphosphate-sugar epimerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MAKRFFLFGLGFSGRVIARGLVEAGWEVMATTRSGEAADCPGVQVLPFDRDHRLPAGCLDGVEAVLSSVPPDDRGDPVLD LMADAIRAAAPAWLGYLSTTGVYGDHGGAWVDEATPPNPGLDRSRRRLAAETQWRERGAHIFRLAGIYGPGRSAVDTVRA GQARRVVKPGQVFSRIHVEDIAAAILASLGRPDPGAIYNLCDDDAAPPQEVIAHACALLGLEPPPEIPWEQAEATLSPMA LSFYADNKRVDNARMKRDLGVRLKYPTYREGLKSCL
Sequences:
>Translated_276_residues MAKRFFLFGLGFSGRVIARGLVEAGWEVMATTRSGEAADCPGVQVLPFDRDHRLPAGCLDGVEAVLSSVPPDDRGDPVLD LMADAIRAAAPAWLGYLSTTGVYGDHGGAWVDEATPPNPGLDRSRRRLAAETQWRERGAHIFRLAGIYGPGRSAVDTVRA GQARRVVKPGQVFSRIHVEDIAAAILASLGRPDPGAIYNLCDDDAAPPQEVIAHACALLGLEPPPEIPWEQAEATLSPMA LSFYADNKRVDNARMKRDLGVRLKYPTYREGLKSCL >Mature_275_residues AKRFFLFGLGFSGRVIARGLVEAGWEVMATTRSGEAADCPGVQVLPFDRDHRLPAGCLDGVEAVLSSVPPDDRGDPVLDL MADAIRAAAPAWLGYLSTTGVYGDHGGAWVDEATPPNPGLDRSRRRLAAETQWRERGAHIFRLAGIYGPGRSAVDTVRAG QARRVVKPGQVFSRIHVEDIAAAILASLGRPDPGAIYNLCDDDAAPPQEVIAHACALLGLEPPPEIPWEQAEATLSPMAL SFYADNKRVDNARMKRDLGVRLKYPTYREGLKSCL
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788327, Length=283, Percent_Identity=30.0353356890459, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001509 - InterPro: IPR016040 [H]
Pfam domain/function: PF01370 Epimerase [H]
EC number: NA
Molecular weight: Translated: 29795; Mature: 29664
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRFFLFGLGFSGRVIARGLVEAGWEVMATTRSGEAADCPGVQVLPFDRDHRLPAGCLD CCCEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCHHHHH GVEAVLSSVPPDDRGDPVLDLMADAIRAAAPAWLGYLSTTGVYGDHGGAWVDEATPPNPG HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC LDRSRRRLAAETQWRERGAHIFRLAGIYGPGRSAVDTVRAGQARRVVKPGQVFSRIHVED CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH IAAAILASLGRPDPGAIYNLCDDDAAPPQEVIAHACALLGLEPPPEIPWEQAEATLSPMA HHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCEE LSFYADNKRVDNARMKRDLGVRLKYPTYREGLKSCL EEEECCCCCCCHHHHHHCCCCEECCCHHHHHHHHCC >Mature Secondary Structure AKRFFLFGLGFSGRVIARGLVEAGWEVMATTRSGEAADCPGVQVLPFDRDHRLPAGCLD CCEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCHHHHH GVEAVLSSVPPDDRGDPVLDLMADAIRAAAPAWLGYLSTTGVYGDHGGAWVDEATPPNPG HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC LDRSRRRLAAETQWRERGAHIFRLAGIYGPGRSAVDTVRAGQARRVVKPGQVFSRIHVED CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH IAAAILASLGRPDPGAIYNLCDDDAAPPQEVIAHACALLGLEPPPEIPWEQAEATLSPMA HHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCEE LSFYADNKRVDNARMKRDLGVRLKYPTYREGLKSCL EEEECCCCCCCHHHHHHCCCCEECCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]