Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83312981

Identifier: 83312981

GI number: 83312981

Start: 4290404

End: 4290829

Strand: Reverse

Name: 83312981

Synonym: amb3882

Alternate gene names: NA

Gene position: 4290829-4290404 (Counterclockwise)

Preceding gene: 83312982

Following gene: 83312976

Centisome position: 86.38

GC content: 61.5

Gene sequence:

>426_bases
ATGATCGACCGGCGCCGCTTTCTTGTCGCGGCCCTTGCCGCGGGCCTCGCTCCCTCCCTCGCCTTGGCCGAGGAGAAGAA
GAAGGAGGATAAGAAGAAGGAGGGCAAGGGTGCGCCGCTGCCCATTCCCTCCAAGGGCGAGCGCTACGTCCGCATTCCCA
CCATCGCGCTGGAGCTGTGGGATTCCTACGGCAATTTCCACCTGTCCACCGTGGATCTGCTGATGCTGGTCCCCGAGGAG
GCCAAGGTGTCCGAGAAGGCCATCTCGGACAAGATGCGCAAGGTGCTGAACGGCATTCCCTACGAGGAATACATGAGCAG
CAATCCGGCCCCCATGATCAAGGCCACCATGCTCGAACTGGTGCGCAAGGAACCCGGTTGCGAACAGACCCGGGAAGTCC
TGATCTCCAAGATGCTGTTCCGCTGA

Upstream 100 bases:

>100_bases
GGCGTCAAGGTCATCGTCAACGCCCTGCTGGGCAACATCCGCGCCATGGGCGCCGAACTGGCCGAGGCCACCGTCATCCT
CTCCCACGATGGAGACTAGA

Downstream 100 bases:

>100_bases
GGGACGCCCACGGCTGCCCGGTTTGACAGGCTGCTGAAAAAACGTCGCTTCGGGGGCGTTTGCCCCCGATCCCCCCAACC
GGGAAGCACAGCTTCCCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MIDRRRFLVAALAAGLAPSLALAEEKKKEDKKKEGKGAPLPIPSKGERYVRIPTIALELWDSYGNFHLSTVDLLMLVPEE
AKVSEKAISDKMRKVLNGIPYEEYMSSNPAPMIKATMLELVRKEPGCEQTREVLISKMLFR

Sequences:

>Translated_141_residues
MIDRRRFLVAALAAGLAPSLALAEEKKKEDKKKEGKGAPLPIPSKGERYVRIPTIALELWDSYGNFHLSTVDLLMLVPEE
AKVSEKAISDKMRKVLNGIPYEEYMSSNPAPMIKATMLELVRKEPGCEQTREVLISKMLFR
>Mature_141_residues
MIDRRRFLVAALAAGLAPSLALAEEKKKEDKKKEGKGAPLPIPSKGERYVRIPTIALELWDSYGNFHLSTVDLLMLVPEE
AKVSEKAISDKMRKVLNGIPYEEYMSSNPAPMIKATMLELVRKEPGCEQTREVLISKMLFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15873; Mature: 15873

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDRRRFLVAALAAGLAPSLALAEEKKKEDKKKEGKGAPLPIPSKGERYVRIPTIALELW
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHHHH
DSYGNFHLSTVDLLMLVPEEAKVSEKAISDKMRKVLNGIPYEEYMSSNPAPMIKATMLEL
HHCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHH
VRKEPGCEQTREVLISKMLFR
HHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDRRRFLVAALAAGLAPSLALAEEKKKEDKKKEGKGAPLPIPSKGERYVRIPTIALELW
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHHHH
DSYGNFHLSTVDLLMLVPEEAKVSEKAISDKMRKVLNGIPYEEYMSSNPAPMIKATMLEL
HHCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHH
VRKEPGCEQTREVLISKMLFR
HHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA