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The map label for this gene is nahD [H]

Identifier: 83312929

GI number: 83312929

Start: 4231308

End: 4231910

Strand: Reverse

Name: nahD [H]

Synonym: amb3830

Alternate gene names: 83312929

Gene position: 4231910-4231308 (Counterclockwise)

Preceding gene: 83312930

Following gene: 83312928

Centisome position: 85.2

GC content: 66.67

Gene sequence:

>603_bases
ATGACCCAGCCGGTGGAGTTCTATTTCGATTTTGCCTCGCCTTACGGCTACTTCGCCTCCCTGGAGGTGGACGAGCTGGT
GGCCGCCTTCGGCCGCGAGGTGGCGTGGAAGCCGATCATGATCGGCTCGGCCTTCAAGGCCTCGGGCAACCTGCCGCTGG
TCAGCCAGCCCATGAAGGGCGAGTATTCCCGCCACGACTGGGAACGCGTGGCGCGGCTGATGGGGGCGCCCTATCGCCTG
CCCGACCCCTTCCCGGTTCCGGCGCTGCCCCCCTCGCGGGCCTATTGGTGGCTGGAGGGCCGGGACAAGGACCTGGCCAG
GAGCTATGCCCGGGCGGTCTACCTCGCCTATTTCGCCGAGAACATGGATATCTCCAGCCCGGAGGTGGCCTGTGCCCTGG
GCGTGCCCCTGGGCATCGACCCGGACGAGATGGCCGCGGCCATCCAATCCCCCCAGTGGAAGGGCCGTCTCAAGGAGGAA
ACCGAGGCCGCCATCGCCAAGGGCGTCTTCGGCTCGCCGTTTTTTCTGGTGGACGGCGAAGGCTTTTGGGGCGCCGACCG
TTTATGGATGGTGGGAGCCTGGCTGGAAAAAGGCGGCTGGTGA

Upstream 100 bases:

>100_bases
GTGGCCGGCATGCGAAAGGTCATGGCCGGGCTGACGGCCGGGGACAGCGGCGCCTTCATCCATTACGATGGGTCTCGCCT
GTCCTGGTAGGGAGCAAAGC

Downstream 100 bases:

>100_bases
CCTAAATTTAGCTGTAGGGCTTGGGCCGGAGGTCGAGCCATACTTGCCGGTGGTTGCCGGACATGGCGCTTGGTGCCATT
GTCGCCGCCACCAAAGAACG

Product: 2-hydroxychromene-2-carboxylate isomerase

Products: NA

Alternate protein names: HCCA isomerase [H]

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MTQPVEFYFDFASPYGYFASLEVDELVAAFGREVAWKPIMIGSAFKASGNLPLVSQPMKGEYSRHDWERVARLMGAPYRL
PDPFPVPALPPSRAYWWLEGRDKDLARSYARAVYLAYFAENMDISSPEVACALGVPLGIDPDEMAAAIQSPQWKGRLKEE
TEAAIAKGVFGSPFFLVDGEGFWGADRLWMVGAWLEKGGW

Sequences:

>Translated_200_residues
MTQPVEFYFDFASPYGYFASLEVDELVAAFGREVAWKPIMIGSAFKASGNLPLVSQPMKGEYSRHDWERVARLMGAPYRL
PDPFPVPALPPSRAYWWLEGRDKDLARSYARAVYLAYFAENMDISSPEVACALGVPLGIDPDEMAAAIQSPQWKGRLKEE
TEAAIAKGVFGSPFFLVDGEGFWGADRLWMVGAWLEKGGW
>Mature_199_residues
TQPVEFYFDFASPYGYFASLEVDELVAAFGREVAWKPIMIGSAFKASGNLPLVSQPMKGEYSRHDWERVARLMGAPYRLP
DPFPVPALPPSRAYWWLEGRDKDLARSYARAVYLAYFAENMDISSPEVACALGVPLGIDPDEMAAAIQSPQWKGRLKEET
EAAIAKGVFGSPFFLVDGEGFWGADRLWMVGAWLEKGGW

Specific function: Catalyzes the isomerization of 2-hydroxychromene-2- carboxylate (HCCA) to trans-O-hydroxybenzylidenepyruvate (THBPA). The reaction is reversible [H]

COG id: COG3917

COG function: function code Q; 2-hydroxychromene-2-carboxylate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17539520, Length=205, Percent_Identity=29.2682926829268, Blast_Score=74, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001853
- InterPro:   IPR014440
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01323 DSBA [H]

EC number: NA

Molecular weight: Translated: 22326; Mature: 22194

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPVEFYFDFASPYGYFASLEVDELVAAFGREVAWKPIMIGSAFKASGNLPLVSQPMKG
CCCCEEEEEECCCCCCEEEECCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEECCCCCC
EYSRHDWERVARLMGAPYRLPDPFPVPALPPSRAYWWLEGRDKDLARSYARAVYLAYFAE
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
NMDISSPEVACALGVPLGIDPDEMAAAIQSPQWKGRLKEETEAAIAKGVFGSPFFLVDGE
CCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCC
GFWGADRLWMVGAWLEKGGW
CCCCCCHHHEEHHHHHCCCC
>Mature Secondary Structure 
TQPVEFYFDFASPYGYFASLEVDELVAAFGREVAWKPIMIGSAFKASGNLPLVSQPMKG
CCCEEEEEECCCCCCEEEECCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEECCCCCC
EYSRHDWERVARLMGAPYRLPDPFPVPALPPSRAYWWLEGRDKDLARSYARAVYLAYFAE
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
NMDISSPEVACALGVPLGIDPDEMAAAIQSPQWKGRLKEETEAAIAKGVFGSPFFLVDGE
CCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCC
GFWGADRLWMVGAWLEKGGW
CCCCCCHHHEEHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8002605; 1447127 [H]