| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is gltI [H]
Identifier: 83312881
GI number: 83312881
Start: 4164720
End: 4165628
Strand: Reverse
Name: gltI [H]
Synonym: amb3782
Alternate gene names: 83312881
Gene position: 4165628-4164720 (Counterclockwise)
Preceding gene: 83312883
Following gene: 83312879
Centisome position: 83.86
GC content: 65.57
Gene sequence:
>909_bases ATGAAGCCTTTCGTCCTGCCGCTGTTCCTGGCCCTGGCCGTAATTTCCACCGGCGGCGCCGCACGCGCCGAGCCGACCCT GGACAAGGTGAAGCGAACCGGCTCCGTGGTCCTCGGCGTGCGCGAGGCGTCCTATCCGCTGTCCTACCTGGACGGCGACA AGAAGCCCATCGGCTACCATGTGGACATCTGCCGCCGCGTCACCGAGGCGGTGAAGGCCCAGCTCGGCCTGGCCGCCCTT GAGGTGCGAACCGAGGTGGTGACCTCCAAGACCCGCATTCCCCGCCTGCTGGACGGCGGCATCGACCTGGAATGCGGTTC CACCACCAATAATGCGGCGCGCCAGACCCAGGTGGCCTTCGCTCCCACCACTTACGTGGCTTCGGTGCGCATCGCGGTGA AAAAGGCCGCCCATATCGGTAAGTTGTCCCAGCTGGACGGCAAGGCGGTGGCCACCACGGCGGGCAGCACCAGCGTGCAG TTGCTTAAGGCCCGGGTCCAGGGCCGCGACATCAAGGTCACCGAGCTGTTCGGCAACGACCACGCCGAATCGTTCAAGAT GCTGGAAAGCGACCAGGCCGCCGCCTTCGTCATGGACGACAACCTGCTGGCCGGACTGATCGCCAGTTCGGCGGCGCCCA AGGATTACCAGATCCTGCCCCAGACCCTGAACACCGAACCCATCGCCATCATGCTGCGCAAGGGGGACCCGGAGTTCAAG GCGCTGGTGGACCGCACGGTCAAGGCGATGATGGAATCGGGCGAGGTGGGGCGGCTTTACGCCAAGTGGTTCCAGTCGCC CATTCCGCCCATGAACGCGGCGCTGGATTTCCCCATGAGCCCGGTTCTGCTCAGCCTGATCAAATTCCCCGGCGACGATC CCGCCGAGGCCTTCCGGCCGGAGGAGTAA
Upstream 100 bases:
>100_bases GGCTGCAAGCCCCGCATACCCCCCTGTACCCTCGGCTACGTTGACAGCGGCGCGGACCGGGTATCTAGTTTTCGCGAAAT AATCTTACGGACCCGTCGCG
Downstream 100 bases:
>100_bases GGGGGCGCCGACGGGCGGCGCCCCAGGGCCGGTCCTACTCGCTCTTGTAGTTCGGCGCTTCCTTGGTGATGGCGATGTCG TGGACATGGCTTTCACGCAA
Product: amino acid ABC transporter periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MKPFVLPLFLALAVISTGGAARAEPTLDKVKRTGSVVLGVREASYPLSYLDGDKKPIGYHVDICRRVTEAVKAQLGLAAL EVRTEVVTSKTRIPRLLDGGIDLECGSTTNNAARQTQVAFAPTTYVASVRIAVKKAAHIGKLSQLDGKAVATTAGSTSVQ LLKARVQGRDIKVTELFGNDHAESFKMLESDQAAAFVMDDNLLAGLIASSAAPKDYQILPQTLNTEPIAIMLRKGDPEFK ALVDRTVKAMMESGEVGRLYAKWFQSPIPPMNAALDFPMSPVLLSLIKFPGDDPAEAFRPEE
Sequences:
>Translated_302_residues MKPFVLPLFLALAVISTGGAARAEPTLDKVKRTGSVVLGVREASYPLSYLDGDKKPIGYHVDICRRVTEAVKAQLGLAAL EVRTEVVTSKTRIPRLLDGGIDLECGSTTNNAARQTQVAFAPTTYVASVRIAVKKAAHIGKLSQLDGKAVATTAGSTSVQ LLKARVQGRDIKVTELFGNDHAESFKMLESDQAAAFVMDDNLLAGLIASSAAPKDYQILPQTLNTEPIAIMLRKGDPEFK ALVDRTVKAMMESGEVGRLYAKWFQSPIPPMNAALDFPMSPVLLSLIKFPGDDPAEAFRPEE >Mature_302_residues MKPFVLPLFLALAVISTGGAARAEPTLDKVKRTGSVVLGVREASYPLSYLDGDKKPIGYHVDICRRVTEAVKAQLGLAAL EVRTEVVTSKTRIPRLLDGGIDLECGSTTNNAARQTQVAFAPTTYVASVRIAVKKAAHIGKLSQLDGKAVATTAGSTSVQ LLKARVQGRDIKVTELFGNDHAESFKMLESDQAAAFVMDDNLLAGLIASSAAPKDYQILPQTLNTEPIAIMLRKGDPEFK ALVDRTVKAMMESGEVGRLYAKWFQSPIPPMNAALDFPMSPVLLSLIKFPGDDPAEAFRPEE
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=267, Percent_Identity=41.5730337078652, Blast_Score=224, Evalue=4e-60, Organism=Escherichia coli, GI1787031, Length=231, Percent_Identity=24.2424242424242, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 32495; Mature: 32495
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPFVLPLFLALAVISTGGAARAEPTLDKVKRTGSVVLGVREASYPLSYLDGDKKPIGYH CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEECCCCCHHHCCCCCCCCCCH VDICRRVTEAVKAQLGLAALEVRTEVVTSKTRIPRLLDGGIDLECGSTTNNAARQTQVAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCCCCHHHHEEEEE APTTYVASVRIAVKKAAHIGKLSQLDGKAVATTAGSTSVQLLKARVQGRDIKVTELFGND CCHHHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCCC HAESFKMLESDQAAAFVMDDNLLAGLIASSAAPKDYQILPQTLNTEPIAIMLRKGDPEFK CHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCCEECCCCCCCCCEEEEEECCCCHHH ALVDRTVKAMMESGEVGRLYAKWFQSPIPPMNAALDFPMSPVLLSLIKFPGDDPAEAFRP HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHCCCCCHHHCCCC EE CC >Mature Secondary Structure MKPFVLPLFLALAVISTGGAARAEPTLDKVKRTGSVVLGVREASYPLSYLDGDKKPIGYH CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEECCCCCHHHCCCCCCCCCCH VDICRRVTEAVKAQLGLAALEVRTEVVTSKTRIPRLLDGGIDLECGSTTNNAARQTQVAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCCCCHHHHEEEEE APTTYVASVRIAVKKAAHIGKLSQLDGKAVATTAGSTSVQLLKARVQGRDIKVTELFGND CCHHHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCCC HAESFKMLESDQAAAFVMDDNLLAGLIASSAAPKDYQILPQTLNTEPIAIMLRKGDPEFK CHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCCEECCCCCCCCCEEEEEECCCCHHH ALVDRTVKAMMESGEVGRLYAKWFQSPIPPMNAALDFPMSPVLLSLIKFPGDDPAEAFRP HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHCCCCCHHHCCCC EE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]