| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312859
Identifier: 83312859
GI number: 83312859
Start: 4133049
End: 4134356
Strand: Reverse
Name: 83312859
Synonym: amb3760
Alternate gene names: NA
Gene position: 4134356-4133049 (Counterclockwise)
Preceding gene: 83312861
Following gene: 83312858
Centisome position: 83.23
GC content: 65.06
Gene sequence:
>1308_bases TTGCCCGATGAGTCGATATCTTCATGGTTCACGCGAACCGCAGCCGCCAACGGTCTGCGGCCGGGCGAGCTTTACCGCAT CGTCCAGCCCGGCGGGGATCGCAATCCCCGCGATCTCGACCGTCATGCCGATGATTGCCTGCTGGACCTGCTGGCGGGCA AGACGGGTGTTCCGGTCGATGACCTGAAGCACGCCACCTTTCGCCGCTGGGCTGGGCGCTTGTTCGAGCACGACGATGGC CTCAACAAGCTGGTATGGCTGCCGCCGGCCGGGCGCGAGGGCGGGCGCCGCTGCTTCGGTCAGCAGGTCTGCCCCTGGTG CCTGCGGGCCGATGCGCAACCGTACTTGCGCCTCAACTGGCGGCTCTCCTTTTCCACCACATGTCCGATCCATGGGCGCC TGCTGCTGGACCGGTGTCCCTCCTGTGCCGAGCCGTTCAGCATCCTGCGCCAGGACGGGCGCGGTGCCATCTGCTGTCCG GGCTGTGGTGCCGATCTCCGCGACTTCACCGGGGATGAACCGGCTTTTGACACGATCTCGGTGCAACGCGATCTGCTGGG CCTGATCCGGGAGGGATGGCGAGATCTCGGCGATTATGGTCCGGTCTATTCCTTCGTGGTGCTCGAGATATTGGCCCAAC TGCTCCGTCTGCTGGCCGGCGGCAAGCACGCCCATGCTTTGAGGCTCTGGTTGGCCGAGCAAGCCCCAAGCCTCGCGGTT CGCCCCGAAAGCCTTCCCCGTGCCCGGGATGGCGCCTTGCTGACCCCGCGCGCCCGGGGTGTGCTTGTCGCCATGGCCCA CTGGTTGCTGGCCGAATGGCCGCATCGCTTTGTCGAGGCCGCCAAGGCGGCGGGCATGACCAGCACCGATCTGCGCAAGC GCTCGGTGGGTGAGTATCCCTTCGCCTACGCCCATGCGGTGGACTGGCACTTGAAGGAGCCGCACAAGGGCGATGCCACG GAAGAGATCATGGTGGCGGCCCAGATGCTCCACGACCATGGCCAATCGGCCAGTCGCCAGAATCTGGTTGCCCTGTGCGG AACCAAGTTGGGCTCCATGGGTGGAGTTGCCGATCCCGTAGCCAGCGGTTTGCCGTGGGGCAAAGGGCGGTATTGGAAGC TGGATGGCGTCTCGCCCGAGGTGAAAGCCGCCGCCCGCCTTGCCGCACATCGTGCTGGCGAAGACGTGGGGCCATGGCTG GATGCCCTACTTCGCCGGATGCTTGGGCTCTGCGCCATCAAAACACCTTTTGATCGTCATGATCCCGACACAATCACACT CGACGCTAACGTTGGTTGTGAAGGGTGA
Upstream 100 bases:
>100_bases ACCTCTCGGCCACCGATCGCGCTATGATCCTCGGCCTCCACTTCGGTTGGAGGCTGGGCCGATGCATCTCGATGATCGCT GGCCAGGGCACCCCAGGCTG
Downstream 100 bases:
>100_bases TGGGGGACACTCGATGCCTGTGCGCAAAATCGGCCTTTGCTATCGTAGTGTCAGTGGACGGGTGCCCATAGGACAGGGGC GGCCCGGCGTCCAGGTGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MPDESISSWFTRTAAANGLRPGELYRIVQPGGDRNPRDLDRHADDCLLDLLAGKTGVPVDDLKHATFRRWAGRLFEHDDG LNKLVWLPPAGREGGRRCFGQQVCPWCLRADAQPYLRLNWRLSFSTTCPIHGRLLLDRCPSCAEPFSILRQDGRGAICCP GCGADLRDFTGDEPAFDTISVQRDLLGLIREGWRDLGDYGPVYSFVVLEILAQLLRLLAGGKHAHALRLWLAEQAPSLAV RPESLPRARDGALLTPRARGVLVAMAHWLLAEWPHRFVEAAKAAGMTSTDLRKRSVGEYPFAYAHAVDWHLKEPHKGDAT EEIMVAAQMLHDHGQSASRQNLVALCGTKLGSMGGVADPVASGLPWGKGRYWKLDGVSPEVKAAARLAAHRAGEDVGPWL DALLRRMLGLCAIKTPFDRHDPDTITLDANVGCEG
Sequences:
>Translated_435_residues MPDESISSWFTRTAAANGLRPGELYRIVQPGGDRNPRDLDRHADDCLLDLLAGKTGVPVDDLKHATFRRWAGRLFEHDDG LNKLVWLPPAGREGGRRCFGQQVCPWCLRADAQPYLRLNWRLSFSTTCPIHGRLLLDRCPSCAEPFSILRQDGRGAICCP GCGADLRDFTGDEPAFDTISVQRDLLGLIREGWRDLGDYGPVYSFVVLEILAQLLRLLAGGKHAHALRLWLAEQAPSLAV RPESLPRARDGALLTPRARGVLVAMAHWLLAEWPHRFVEAAKAAGMTSTDLRKRSVGEYPFAYAHAVDWHLKEPHKGDAT EEIMVAAQMLHDHGQSASRQNLVALCGTKLGSMGGVADPVASGLPWGKGRYWKLDGVSPEVKAAARLAAHRAGEDVGPWL DALLRRMLGLCAIKTPFDRHDPDTITLDANVGCEG >Mature_434_residues PDESISSWFTRTAAANGLRPGELYRIVQPGGDRNPRDLDRHADDCLLDLLAGKTGVPVDDLKHATFRRWAGRLFEHDDGL NKLVWLPPAGREGGRRCFGQQVCPWCLRADAQPYLRLNWRLSFSTTCPIHGRLLLDRCPSCAEPFSILRQDGRGAICCPG CGADLRDFTGDEPAFDTISVQRDLLGLIREGWRDLGDYGPVYSFVVLEILAQLLRLLAGGKHAHALRLWLAEQAPSLAVR PESLPRARDGALLTPRARGVLVAMAHWLLAEWPHRFVEAAKAAGMTSTDLRKRSVGEYPFAYAHAVDWHLKEPHKGDATE EIMVAAQMLHDHGQSASRQNLVALCGTKLGSMGGVADPVASGLPWGKGRYWKLDGVSPEVKAAARLAAHRAGEDVGPWLD ALLRRMLGLCAIKTPFDRHDPDTITLDANVGCEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47811; Mature: 47680
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDESISSWFTRTAAANGLRPGELYRIVQPGGDRNPRDLDRHADDCLLDLLAGKTGVPVD CCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHH DLKHATFRRWAGRLFEHDDGLNKLVWLPPAGREGGRRCFGQQVCPWCLRADAQPYLRLNW HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCHHHHHCCCCCEEEEEE RLSFSTTCPIHGRLLLDRCPSCAEPFSILRQDGRGAICCPGCGADLRDFTGDEPAFDTIS EEEECCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCHHHCCCCCCCCHHHH VQRDLLGLIREGWRDLGDYGPVYSFVVLEILAQLLRLLAGGKHAHALRLWLAEQAPSLAV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEE RPESLPRARDGALLTPRARGVLVAMAHWLLAEWPHRFVEAAKAAGMTSTDLRKRSVGEYP CCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC FAYAHAVDWHLKEPHKGDATEEIMVAAQMLHDHGQSASRQNLVALCGTKLGSMGGVADPV CHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHH ASGLPWGKGRYWKLDGVSPEVKAAARLAAHRAGEDVGPWLDALLRRMLGLCAIKTPFDRH HCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC DPDTITLDANVGCEG CCCEEEEECCCCCCC >Mature Secondary Structure PDESISSWFTRTAAANGLRPGELYRIVQPGGDRNPRDLDRHADDCLLDLLAGKTGVPVD CCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHH DLKHATFRRWAGRLFEHDDGLNKLVWLPPAGREGGRRCFGQQVCPWCLRADAQPYLRLNW HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCHHHHHCCCCCEEEEEE RLSFSTTCPIHGRLLLDRCPSCAEPFSILRQDGRGAICCPGCGADLRDFTGDEPAFDTIS EEEECCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCHHHCCCCCCCCHHHH VQRDLLGLIREGWRDLGDYGPVYSFVVLEILAQLLRLLAGGKHAHALRLWLAEQAPSLAV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEE RPESLPRARDGALLTPRARGVLVAMAHWLLAEWPHRFVEAAKAAGMTSTDLRKRSVGEYP CCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC FAYAHAVDWHLKEPHKGDATEEIMVAAQMLHDHGQSASRQNLVALCGTKLGSMGGVADPV CHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHH ASGLPWGKGRYWKLDGVSPEVKAAARLAAHRAGEDVGPWLDALLRRMLGLCAIKTPFDRH HCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC DPDTITLDANVGCEG CCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA