Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83312856

Identifier: 83312856

GI number: 83312856

Start: 4129540

End: 4130436

Strand: Reverse

Name: 83312856

Synonym: amb3757

Alternate gene names: NA

Gene position: 4130436-4129540 (Counterclockwise)

Preceding gene: 83312857

Following gene: 83312853

Centisome position: 83.16

GC content: 64.77

Gene sequence:

>897_bases
GTGACGCCCGATCTGTTCGCGCTCAATCCGGCGCCCATGCTGCCGTTGGATTTCCCCCAGGACGAGCTTGAGGGCCGCAT
CCGCCGCATTCGCAGTCCCCGCTATGTCGCGTACGAGGCAGGCGAGGCGATCCTCGGCCGCTTGGCCTGGCTGTACGACC
ACCCCAAGGTGGTCCGGCCGCCGTGCAGCCTGATCTATAGTGACACCAACAACGGCAAGACGGCCCTGGCGCAGAAGTTC
GTCCGCGATCACAGCCCGGCGGAGGACAGCCCGGACTTCGGCAAGCGCCCGGTGGTCTACGCCCATGCCCCACCCTATGC
TGATATCAGCGGCCTCTACGACGCGATCCTGCGCTCATTGGGTGCGCCCTATCGATCGACGGCTCGGCCCCAGGCCAAAT
GGGACCAACTGCTCCAGCTATTGGCCGCCGTCGGTACCCGGGTGCTGATCCTCGACGAGGTCAGCAATTTCCTAATCGGC
AAGGTCGATCAGCGCTCCATGGTGCTGAACAGCCTCAAGAGTCTCAGCAACGAGCTGAAGATTCCCGTGGTGGCCATGGG
CACCCAGGATGCGGTCCGGGTCTTCCAGACCGACCAGCAACTGGGTAACCGCTTCGAGCCCATCGGCATTCCGCGCTGGA
GCGTCAGCCGGGAATACGCGCTGTTCGTGGCGCGCTATGCCCAGAGCCTCGAATTGCGGCAGGAGAGCGACTTCCGCTCG
AAGGAACTGATCGGCCGCATCCACGCCATGTCAGAGGGCCTGACCGGGGAAACCTGCAAGCTGCTGGCCCTCGCCGCCGA
GACCTCGATCCATTCCGGTCGCGAGGTCATCGACATGGGGACGCTGGATCAGGTGCCGTGGGTGATGCCGAGTGAGAGGA
GACGGGCGGCGAGGTGA

Upstream 100 bases:

>100_bases
TGGTGGTCGATAACCAGACCTCCGAGCCGCCAAAGCCCAGGCCGGTGTCCAACGATTTCGATTTCGACGATGCAGAGATC
AAGAGGGGGGTAGAAGAATG

Downstream 100 bases:

>100_bases
TGCGATAGGCTGATCGGCGGAGGCTAAAATGCCGAAAAGGAGGTGAGGCGAGACATAAGTGAGCTACTCCCCATTGGTTG
GACAGAATTCGGGGAAGTTT

Product: putative ATP-binding protein

Products: NA

Alternate protein names: Transposition Helper Protein; Transposon Transposition Helper Protein C; TniB-Like Transposition Protein; Tranposase Complex Protein; TniB Protein; Transposition Helper Protein Truncated; Urease Subunit Alpha

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MTPDLFALNPAPMLPLDFPQDELEGRIRRIRSPRYVAYEAGEAILGRLAWLYDHPKVVRPPCSLIYSDTNNGKTALAQKF
VRDHSPAEDSPDFGKRPVVYAHAPPYADISGLYDAILRSLGAPYRSTARPQAKWDQLLQLLAAVGTRVLILDEVSNFLIG
KVDQRSMVLNSLKSLSNELKIPVVAMGTQDAVRVFQTDQQLGNRFEPIGIPRWSVSREYALFVARYAQSLELRQESDFRS
KELIGRIHAMSEGLTGETCKLLALAAETSIHSGREVIDMGTLDQVPWVMPSERRRAAR

Sequences:

>Translated_298_residues
MTPDLFALNPAPMLPLDFPQDELEGRIRRIRSPRYVAYEAGEAILGRLAWLYDHPKVVRPPCSLIYSDTNNGKTALAQKF
VRDHSPAEDSPDFGKRPVVYAHAPPYADISGLYDAILRSLGAPYRSTARPQAKWDQLLQLLAAVGTRVLILDEVSNFLIG
KVDQRSMVLNSLKSLSNELKIPVVAMGTQDAVRVFQTDQQLGNRFEPIGIPRWSVSREYALFVARYAQSLELRQESDFRS
KELIGRIHAMSEGLTGETCKLLALAAETSIHSGREVIDMGTLDQVPWVMPSERRRAAR
>Mature_297_residues
TPDLFALNPAPMLPLDFPQDELEGRIRRIRSPRYVAYEAGEAILGRLAWLYDHPKVVRPPCSLIYSDTNNGKTALAQKFV
RDHSPAEDSPDFGKRPVVYAHAPPYADISGLYDAILRSLGAPYRSTARPQAKWDQLLQLLAAVGTRVLILDEVSNFLIGK
VDQRSMVLNSLKSLSNELKIPVVAMGTQDAVRVFQTDQQLGNRFEPIGIPRWSVSREYALFVARYAQSLELRQESDFRSK
ELIGRIHAMSEGLTGETCKLLALAAETSIHSGREVIDMGTLDQVPWVMPSERRRAAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33386; Mature: 33254

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDLFALNPAPMLPLDFPQDELEGRIRRIRSPRYVAYEAGEAILGRLAWLYDHPKVVRP
CCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCEECC
PCSLIYSDTNNGKTALAQKFVRDHSPAEDSPDFGKRPVVYAHAPPYADISGLYDAILRSL
CCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
GAPYRSTARPQAKWDQLLQLLAAVGTRVLILDEVSNFLIGKVDQRSMVLNSLKSLSNELK
CCCCCCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
IPVVAMGTQDAVRVFQTDQQLGNRFEPIGIPRWSVSREYALFVARYAQSLELRQESDFRS
CCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHH
KELIGRIHAMSEGLTGETCKLLALAAETSIHSGREVIDMGTLDQVPWVMPSERRRAAR
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHCCC
>Mature Secondary Structure 
TPDLFALNPAPMLPLDFPQDELEGRIRRIRSPRYVAYEAGEAILGRLAWLYDHPKVVRP
CCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCEECC
PCSLIYSDTNNGKTALAQKFVRDHSPAEDSPDFGKRPVVYAHAPPYADISGLYDAILRSL
CCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
GAPYRSTARPQAKWDQLLQLLAAVGTRVLILDEVSNFLIGKVDQRSMVLNSLKSLSNELK
CCCCCCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
IPVVAMGTQDAVRVFQTDQQLGNRFEPIGIPRWSVSREYALFVARYAQSLELRQESDFRS
CCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHH
KELIGRIHAMSEGLTGETCKLLALAAETSIHSGREVIDMGTLDQVPWVMPSERRRAAR
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA