| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312856
Identifier: 83312856
GI number: 83312856
Start: 4129540
End: 4130436
Strand: Reverse
Name: 83312856
Synonym: amb3757
Alternate gene names: NA
Gene position: 4130436-4129540 (Counterclockwise)
Preceding gene: 83312857
Following gene: 83312853
Centisome position: 83.16
GC content: 64.77
Gene sequence:
>897_bases GTGACGCCCGATCTGTTCGCGCTCAATCCGGCGCCCATGCTGCCGTTGGATTTCCCCCAGGACGAGCTTGAGGGCCGCAT CCGCCGCATTCGCAGTCCCCGCTATGTCGCGTACGAGGCAGGCGAGGCGATCCTCGGCCGCTTGGCCTGGCTGTACGACC ACCCCAAGGTGGTCCGGCCGCCGTGCAGCCTGATCTATAGTGACACCAACAACGGCAAGACGGCCCTGGCGCAGAAGTTC GTCCGCGATCACAGCCCGGCGGAGGACAGCCCGGACTTCGGCAAGCGCCCGGTGGTCTACGCCCATGCCCCACCCTATGC TGATATCAGCGGCCTCTACGACGCGATCCTGCGCTCATTGGGTGCGCCCTATCGATCGACGGCTCGGCCCCAGGCCAAAT GGGACCAACTGCTCCAGCTATTGGCCGCCGTCGGTACCCGGGTGCTGATCCTCGACGAGGTCAGCAATTTCCTAATCGGC AAGGTCGATCAGCGCTCCATGGTGCTGAACAGCCTCAAGAGTCTCAGCAACGAGCTGAAGATTCCCGTGGTGGCCATGGG CACCCAGGATGCGGTCCGGGTCTTCCAGACCGACCAGCAACTGGGTAACCGCTTCGAGCCCATCGGCATTCCGCGCTGGA GCGTCAGCCGGGAATACGCGCTGTTCGTGGCGCGCTATGCCCAGAGCCTCGAATTGCGGCAGGAGAGCGACTTCCGCTCG AAGGAACTGATCGGCCGCATCCACGCCATGTCAGAGGGCCTGACCGGGGAAACCTGCAAGCTGCTGGCCCTCGCCGCCGA GACCTCGATCCATTCCGGTCGCGAGGTCATCGACATGGGGACGCTGGATCAGGTGCCGTGGGTGATGCCGAGTGAGAGGA GACGGGCGGCGAGGTGA
Upstream 100 bases:
>100_bases TGGTGGTCGATAACCAGACCTCCGAGCCGCCAAAGCCCAGGCCGGTGTCCAACGATTTCGATTTCGACGATGCAGAGATC AAGAGGGGGGTAGAAGAATG
Downstream 100 bases:
>100_bases TGCGATAGGCTGATCGGCGGAGGCTAAAATGCCGAAAAGGAGGTGAGGCGAGACATAAGTGAGCTACTCCCCATTGGTTG GACAGAATTCGGGGAAGTTT
Product: putative ATP-binding protein
Products: NA
Alternate protein names: Transposition Helper Protein; Transposon Transposition Helper Protein C; TniB-Like Transposition Protein; Tranposase Complex Protein; TniB Protein; Transposition Helper Protein Truncated; Urease Subunit Alpha
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MTPDLFALNPAPMLPLDFPQDELEGRIRRIRSPRYVAYEAGEAILGRLAWLYDHPKVVRPPCSLIYSDTNNGKTALAQKF VRDHSPAEDSPDFGKRPVVYAHAPPYADISGLYDAILRSLGAPYRSTARPQAKWDQLLQLLAAVGTRVLILDEVSNFLIG KVDQRSMVLNSLKSLSNELKIPVVAMGTQDAVRVFQTDQQLGNRFEPIGIPRWSVSREYALFVARYAQSLELRQESDFRS KELIGRIHAMSEGLTGETCKLLALAAETSIHSGREVIDMGTLDQVPWVMPSERRRAAR
Sequences:
>Translated_298_residues MTPDLFALNPAPMLPLDFPQDELEGRIRRIRSPRYVAYEAGEAILGRLAWLYDHPKVVRPPCSLIYSDTNNGKTALAQKF VRDHSPAEDSPDFGKRPVVYAHAPPYADISGLYDAILRSLGAPYRSTARPQAKWDQLLQLLAAVGTRVLILDEVSNFLIG KVDQRSMVLNSLKSLSNELKIPVVAMGTQDAVRVFQTDQQLGNRFEPIGIPRWSVSREYALFVARYAQSLELRQESDFRS KELIGRIHAMSEGLTGETCKLLALAAETSIHSGREVIDMGTLDQVPWVMPSERRRAAR >Mature_297_residues TPDLFALNPAPMLPLDFPQDELEGRIRRIRSPRYVAYEAGEAILGRLAWLYDHPKVVRPPCSLIYSDTNNGKTALAQKFV RDHSPAEDSPDFGKRPVVYAHAPPYADISGLYDAILRSLGAPYRSTARPQAKWDQLLQLLAAVGTRVLILDEVSNFLIGK VDQRSMVLNSLKSLSNELKIPVVAMGTQDAVRVFQTDQQLGNRFEPIGIPRWSVSREYALFVARYAQSLELRQESDFRSK ELIGRIHAMSEGLTGETCKLLALAAETSIHSGREVIDMGTLDQVPWVMPSERRRAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33386; Mature: 33254
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDLFALNPAPMLPLDFPQDELEGRIRRIRSPRYVAYEAGEAILGRLAWLYDHPKVVRP CCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCEECC PCSLIYSDTNNGKTALAQKFVRDHSPAEDSPDFGKRPVVYAHAPPYADISGLYDAILRSL CCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH GAPYRSTARPQAKWDQLLQLLAAVGTRVLILDEVSNFLIGKVDQRSMVLNSLKSLSNELK CCCCCCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC IPVVAMGTQDAVRVFQTDQQLGNRFEPIGIPRWSVSREYALFVARYAQSLELRQESDFRS CCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHH KELIGRIHAMSEGLTGETCKLLALAAETSIHSGREVIDMGTLDQVPWVMPSERRRAAR HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHCCC >Mature Secondary Structure TPDLFALNPAPMLPLDFPQDELEGRIRRIRSPRYVAYEAGEAILGRLAWLYDHPKVVRP CCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCEECC PCSLIYSDTNNGKTALAQKFVRDHSPAEDSPDFGKRPVVYAHAPPYADISGLYDAILRSL CCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH GAPYRSTARPQAKWDQLLQLLAAVGTRVLILDEVSNFLIGKVDQRSMVLNSLKSLSNELK CCCCCCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC IPVVAMGTQDAVRVFQTDQQLGNRFEPIGIPRWSVSREYALFVARYAQSLELRQESDFRS CCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHH KELIGRIHAMSEGLTGETCKLLALAAETSIHSGREVIDMGTLDQVPWVMPSERRRAAR HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA